Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20200 and CA264_20205 are separated by 330 nucleotides CA264_20205 and CA264_20210 overlap by 4 nucleotides
CA264_20200: CA264_20200 - hypothetical protein, at 4,662,590 to 4,664,119
_20200
CA264_20205: CA264_20205 - DNA-binding response regulator, at 4,664,450 to 4,665,127
_20205
CA264_20210: CA264_20210 - two-component sensor histidine kinase, at 4,665,124 to 4,666,371
_20210
Position (kb)
4664
4665
4666 Strain fitness (log2 ratio)
-1
0
1
2 at 4663.659 kb on + strand, within CA264_20200 at 4663.659 kb on + strand, within CA264_20200 at 4663.659 kb on + strand, within CA264_20200 at 4663.659 kb on + strand, within CA264_20200 at 4663.659 kb on + strand, within CA264_20200 at 4663.660 kb on - strand, within CA264_20200 at 4663.689 kb on + strand, within CA264_20200 at 4663.689 kb on + strand, within CA264_20200 at 4663.690 kb on - strand, within CA264_20200 at 4663.722 kb on - strand, within CA264_20200 at 4663.759 kb on - strand, within CA264_20200 at 4663.866 kb on + strand, within CA264_20200 at 4663.866 kb on + strand, within CA264_20200 at 4663.974 kb on - strand at 4664.075 kb on - strand at 4664.114 kb on + strand at 4664.114 kb on + strand at 4664.138 kb on - strand at 4664.195 kb on + strand at 4664.221 kb on + strand at 4664.222 kb on - strand at 4664.222 kb on - strand at 4664.225 kb on + strand at 4664.225 kb on + strand at 4664.225 kb on + strand at 4664.226 kb on - strand at 4664.239 kb on + strand at 4664.257 kb on + strand at 4664.267 kb on + strand at 4664.375 kb on + strand at 4664.375 kb on + strand at 4664.375 kb on + strand at 4664.376 kb on - strand at 4664.385 kb on + strand at 4664.385 kb on + strand at 4664.448 kb on - strand at 4664.491 kb on + strand at 4664.492 kb on - strand at 4664.504 kb on + strand at 4664.522 kb on + strand, within CA264_20205 at 4664.527 kb on - strand, within CA264_20205 at 4664.547 kb on - strand, within CA264_20205 at 4664.582 kb on + strand, within CA264_20205 at 4664.634 kb on + strand, within CA264_20205 at 4664.635 kb on - strand, within CA264_20205 at 4664.635 kb on - strand, within CA264_20205 at 4664.637 kb on + strand, within CA264_20205 at 4664.637 kb on + strand, within CA264_20205 at 4664.638 kb on - strand, within CA264_20205 at 4664.638 kb on - strand, within CA264_20205 at 4664.641 kb on + strand, within CA264_20205 at 4664.641 kb on + strand, within CA264_20205 at 4664.642 kb on - strand, within CA264_20205 at 4664.642 kb on - strand, within CA264_20205 at 4664.658 kb on - strand, within CA264_20205 at 4664.741 kb on + strand, within CA264_20205 at 4664.741 kb on + strand, within CA264_20205 at 4664.741 kb on + strand, within CA264_20205 at 4664.742 kb on - strand, within CA264_20205 at 4664.742 kb on - strand, within CA264_20205 at 4664.825 kb on - strand, within CA264_20205 at 4664.878 kb on - strand, within CA264_20205 at 4664.913 kb on - strand, within CA264_20205 at 4664.913 kb on - strand, within CA264_20205 at 4664.927 kb on + strand, within CA264_20205 at 4665.036 kb on + strand, within CA264_20205 at 4665.080 kb on + strand at 4665.080 kb on + strand at 4665.109 kb on + strand at 4665.154 kb on + strand at 4665.154 kb on + strand at 4665.155 kb on - strand at 4665.155 kb on - strand at 4665.155 kb on - strand at 4665.156 kb on + strand at 4665.156 kb on + strand at 4665.156 kb on + strand at 4665.156 kb on + strand at 4665.157 kb on - strand at 4665.157 kb on - strand at 4665.157 kb on - strand at 4665.158 kb on + strand at 4665.159 kb on - strand at 4665.159 kb on - strand at 4665.159 kb on - strand at 4665.198 kb on - strand at 4665.202 kb on + strand at 4665.327 kb on + strand, within CA264_20210 at 4665.330 kb on + strand, within CA264_20210 at 4665.331 kb on - strand, within CA264_20210 at 4665.345 kb on + strand, within CA264_20210 at 4665.345 kb on + strand, within CA264_20210 at 4665.345 kb on + strand, within CA264_20210 at 4665.345 kb on + strand, within CA264_20210 at 4665.348 kb on - strand, within CA264_20210 at 4665.357 kb on + strand, within CA264_20210 at 4665.357 kb on + strand, within CA264_20210 at 4665.366 kb on - strand, within CA264_20210 at 4665.439 kb on - strand, within CA264_20210 at 4665.440 kb on + strand, within CA264_20210 at 4665.441 kb on - strand, within CA264_20210 at 4665.496 kb on + strand, within CA264_20210 at 4665.496 kb on + strand, within CA264_20210 at 4665.505 kb on - strand, within CA264_20210 at 4665.546 kb on + strand, within CA264_20210 at 4665.621 kb on - strand, within CA264_20210 at 4665.621 kb on - strand, within CA264_20210 at 4665.673 kb on - strand, within CA264_20210 at 4665.675 kb on - strand, within CA264_20210 at 4665.796 kb on - strand, within CA264_20210 at 4665.800 kb on + strand, within CA264_20210 at 4665.800 kb on + strand, within CA264_20210 at 4665.800 kb on + strand, within CA264_20210 at 4665.861 kb on + strand, within CA264_20210 at 4665.862 kb on - strand, within CA264_20210 at 4665.863 kb on + strand, within CA264_20210 at 4665.875 kb on - strand, within CA264_20210 at 4665.875 kb on - strand, within CA264_20210 at 4665.918 kb on - strand, within CA264_20210 at 4665.920 kb on + strand, within CA264_20210 at 4665.920 kb on + strand, within CA264_20210 at 4665.920 kb on + strand, within CA264_20210 at 4665.921 kb on - strand, within CA264_20210 at 4665.963 kb on - strand, within CA264_20210 at 4665.983 kb on + strand, within CA264_20210 at 4665.983 kb on + strand, within CA264_20210 at 4665.984 kb on - strand, within CA264_20210 at 4665.984 kb on - strand, within CA264_20210 at 4666.037 kb on + strand, within CA264_20210 at 4666.071 kb on - strand, within CA264_20210 at 4666.071 kb on - strand, within CA264_20210 at 4666.092 kb on + strand, within CA264_20210 at 4666.092 kb on + strand, within CA264_20210 at 4666.093 kb on - strand, within CA264_20210 at 4666.098 kb on + strand, within CA264_20210 at 4666.099 kb on - strand, within CA264_20210 at 4666.099 kb on - strand, within CA264_20210 at 4666.112 kb on + strand, within CA264_20210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 4,663,659 + CA264_20200 0.70 +0.8 4,663,659 + CA264_20200 0.70 +0.6 4,663,659 + CA264_20200 0.70 -0.5 4,663,659 + CA264_20200 0.70 +0.1 4,663,659 + CA264_20200 0.70 +0.0 4,663,660 - CA264_20200 0.70 +1.1 4,663,689 + CA264_20200 0.72 +0.4 4,663,689 + CA264_20200 0.72 -0.1 4,663,690 - CA264_20200 0.72 -0.0 4,663,722 - CA264_20200 0.74 +0.4 4,663,759 - CA264_20200 0.76 -0.8 4,663,866 + CA264_20200 0.83 -0.2 4,663,866 + CA264_20200 0.83 +0.2 4,663,974 - +0.6 4,664,075 - +0.1 4,664,114 + -0.5 4,664,114 + +0.2 4,664,138 - +0.4 4,664,195 + +0.5 4,664,221 + +0.7 4,664,222 - +0.5 4,664,222 - +0.4 4,664,225 + +0.1 4,664,225 + -1.3 4,664,225 + -0.8 4,664,226 - -1.3 4,664,239 + -0.4 4,664,257 + +0.4 4,664,267 + +2.7 4,664,375 + +0.8 4,664,375 + +0.3 4,664,375 + -1.3 4,664,376 - -0.6 4,664,385 + +0.3 4,664,385 + +1.7 4,664,448 - -0.0 4,664,491 + +1.9 4,664,492 - +0.1 4,664,504 + -0.1 4,664,522 + CA264_20205 0.11 +0.4 4,664,527 - CA264_20205 0.11 -0.2 4,664,547 - CA264_20205 0.14 +1.7 4,664,582 + CA264_20205 0.19 +0.6 4,664,634 + CA264_20205 0.27 +0.5 4,664,635 - CA264_20205 0.27 +0.2 4,664,635 - CA264_20205 0.27 -0.1 4,664,637 + CA264_20205 0.28 +0.8 4,664,637 + CA264_20205 0.28 -0.1 4,664,638 - CA264_20205 0.28 -0.6 4,664,638 - CA264_20205 0.28 -0.1 4,664,641 + CA264_20205 0.28 +0.2 4,664,641 + CA264_20205 0.28 +0.2 4,664,642 - CA264_20205 0.28 -0.2 4,664,642 - CA264_20205 0.28 +0.2 4,664,658 - CA264_20205 0.31 +1.2 4,664,741 + CA264_20205 0.43 -0.3 4,664,741 + CA264_20205 0.43 -0.4 4,664,741 + CA264_20205 0.43 -0.2 4,664,742 - CA264_20205 0.43 -0.2 4,664,742 - CA264_20205 0.43 +0.2 4,664,825 - CA264_20205 0.55 +0.2 4,664,878 - CA264_20205 0.63 +0.6 4,664,913 - CA264_20205 0.68 -0.5 4,664,913 - CA264_20205 0.68 +0.7 4,664,927 + CA264_20205 0.70 -0.1 4,665,036 + CA264_20205 0.86 +0.3 4,665,080 + +0.5 4,665,080 + -0.6 4,665,109 + +0.5 4,665,154 + +0.2 4,665,154 + +2.2 4,665,155 - +1.4 4,665,155 - -0.5 4,665,155 - +1.8 4,665,156 + -0.4 4,665,156 + +0.5 4,665,156 + -0.1 4,665,156 + +0.3 4,665,157 - +0.3 4,665,157 - +0.8 4,665,157 - +0.5 4,665,158 + -0.8 4,665,159 - -0.3 4,665,159 - +0.2 4,665,159 - -0.3 4,665,198 - +0.4 4,665,202 + -0.5 4,665,327 + CA264_20210 0.16 +1.1 4,665,330 + CA264_20210 0.17 +0.4 4,665,331 - CA264_20210 0.17 +0.6 4,665,345 + CA264_20210 0.18 +0.4 4,665,345 + CA264_20210 0.18 +0.1 4,665,345 + CA264_20210 0.18 +0.0 4,665,345 + CA264_20210 0.18 +0.3 4,665,348 - CA264_20210 0.18 +0.2 4,665,357 + CA264_20210 0.19 +1.2 4,665,357 + CA264_20210 0.19 +0.2 4,665,366 - CA264_20210 0.19 -0.6 4,665,439 - CA264_20210 0.25 +1.7 4,665,440 + CA264_20210 0.25 -0.2 4,665,441 - CA264_20210 0.25 +0.2 4,665,496 + CA264_20210 0.30 +0.5 4,665,496 + CA264_20210 0.30 +0.0 4,665,505 - CA264_20210 0.31 +1.1 4,665,546 + CA264_20210 0.34 -0.3 4,665,621 - CA264_20210 0.40 +0.5 4,665,621 - CA264_20210 0.40 -0.7 4,665,673 - CA264_20210 0.44 +0.4 4,665,675 - CA264_20210 0.44 +0.2 4,665,796 - CA264_20210 0.54 -0.4 4,665,800 + CA264_20210 0.54 -0.2 4,665,800 + CA264_20210 0.54 -0.2 4,665,800 + CA264_20210 0.54 -0.4 4,665,861 + CA264_20210 0.59 -0.7 4,665,862 - CA264_20210 0.59 -0.4 4,665,863 + CA264_20210 0.59 -1.0 4,665,875 - CA264_20210 0.60 +0.2 4,665,875 - CA264_20210 0.60 -0.4 4,665,918 - CA264_20210 0.64 -1.7 4,665,920 + CA264_20210 0.64 +0.2 4,665,920 + CA264_20210 0.64 +1.5 4,665,920 + CA264_20210 0.64 +0.2 4,665,921 - CA264_20210 0.64 +0.5 4,665,963 - CA264_20210 0.67 +0.2 4,665,983 + CA264_20210 0.69 +0.3 4,665,983 + CA264_20210 0.69 +0.6 4,665,984 - CA264_20210 0.69 +0.2 4,665,984 - CA264_20210 0.69 -1.3 4,666,037 + CA264_20210 0.73 +0.2 4,666,071 - CA264_20210 0.76 -0.0 4,666,071 - CA264_20210 0.76 +0.3 4,666,092 + CA264_20210 0.78 -0.0 4,666,092 + CA264_20210 0.78 -1.0 4,666,093 - CA264_20210 0.78 -0.6 4,666,098 + CA264_20210 0.78 -0.5 4,666,099 - CA264_20210 0.78 +0.5 4,666,099 - CA264_20210 0.78 -0.3 4,666,112 + CA264_20210 0.79 +0.4
Or see this region's nucleotide sequence