Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14900 and CA264_14905 are separated by 494 nucleotides CA264_14905 and CA264_14910 are separated by 90 nucleotides CA264_14910 and CA264_14915 are separated by 89 nucleotides
CA264_14900: CA264_14900 - uvrA paralog in Bacteroidetes (from data) , at 3,501,208 to 3,504,015
_14900
CA264_14905: CA264_14905 - hypothetical protein, at 3,504,510 to 3,505,532
_14905
CA264_14910: CA264_14910 - 30S ribosomal protein THX, at 3,505,623 to 3,505,748
_14910
CA264_14915: CA264_14915 - MFS transporter, at 3,505,838 to 3,507,097
_14915
Position (kb)
3504
3505
3506 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3503.559 kb on + strand, within CA264_14900 at 3503.593 kb on + strand, within CA264_14900 at 3503.594 kb on - strand, within CA264_14900 at 3503.597 kb on - strand, within CA264_14900 at 3503.619 kb on - strand, within CA264_14900 at 3503.655 kb on - strand, within CA264_14900 at 3503.661 kb on - strand, within CA264_14900 at 3503.701 kb on - strand, within CA264_14900 at 3503.707 kb on + strand, within CA264_14900 at 3503.708 kb on - strand, within CA264_14900 at 3503.816 kb on + strand at 3503.956 kb on + strand at 3503.958 kb on + strand at 3503.959 kb on - strand at 3503.959 kb on - strand at 3503.980 kb on + strand at 3504.015 kb on + strand at 3504.043 kb on + strand at 3504.044 kb on - strand at 3504.044 kb on - strand at 3504.046 kb on + strand at 3504.080 kb on + strand at 3504.088 kb on - strand at 3504.093 kb on + strand at 3504.093 kb on + strand at 3504.100 kb on - strand at 3504.103 kb on + strand at 3504.134 kb on - strand at 3504.197 kb on - strand at 3504.197 kb on - strand at 3504.240 kb on - strand at 3504.250 kb on + strand at 3504.306 kb on - strand at 3504.307 kb on + strand at 3504.307 kb on + strand at 3504.307 kb on + strand at 3504.308 kb on - strand at 3504.505 kb on + strand at 3504.521 kb on + strand at 3504.522 kb on - strand at 3504.530 kb on + strand at 3504.530 kb on + strand at 3504.530 kb on + strand at 3504.531 kb on - strand at 3504.542 kb on - strand at 3504.609 kb on + strand at 3504.623 kb on + strand, within CA264_14905 at 3504.676 kb on + strand, within CA264_14905 at 3504.723 kb on - strand, within CA264_14905 at 3504.723 kb on - strand, within CA264_14905 at 3505.191 kb on + strand, within CA264_14905 at 3505.329 kb on - strand, within CA264_14905 at 3505.333 kb on + strand, within CA264_14905 at 3505.334 kb on - strand, within CA264_14905 at 3505.334 kb on - strand, within CA264_14905 at 3505.334 kb on - strand, within CA264_14905 at 3505.334 kb on - strand, within CA264_14905 at 3505.344 kb on + strand, within CA264_14905 at 3505.360 kb on + strand, within CA264_14905 at 3505.366 kb on + strand, within CA264_14905 at 3505.367 kb on - strand, within CA264_14905 at 3505.481 kb on - strand at 3505.481 kb on - strand at 3505.565 kb on + strand at 3505.565 kb on + strand at 3505.609 kb on + strand at 3505.609 kb on + strand at 3505.638 kb on - strand, within CA264_14910 at 3505.701 kb on + strand, within CA264_14910 at 3505.722 kb on - strand, within CA264_14910 at 3505.879 kb on + strand at 3505.890 kb on - strand at 3505.898 kb on - strand at 3505.992 kb on - strand, within CA264_14915 at 3506.049 kb on + strand, within CA264_14915 at 3506.050 kb on - strand, within CA264_14915 at 3506.239 kb on - strand, within CA264_14915 at 3506.399 kb on - strand, within CA264_14915 at 3506.403 kb on - strand, within CA264_14915 at 3506.403 kb on - strand, within CA264_14915 at 3506.503 kb on + strand, within CA264_14915 at 3506.504 kb on - strand, within CA264_14915
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 3,503,559 + CA264_14900 0.84 +0.5 3,503,593 + CA264_14900 0.85 +0.3 3,503,594 - CA264_14900 0.85 -0.7 3,503,597 - CA264_14900 0.85 -0.4 3,503,619 - CA264_14900 0.86 -1.2 3,503,655 - CA264_14900 0.87 -0.2 3,503,661 - CA264_14900 0.87 +1.3 3,503,701 - CA264_14900 0.89 +0.6 3,503,707 + CA264_14900 0.89 -0.1 3,503,708 - CA264_14900 0.89 -0.2 3,503,816 + -0.1 3,503,956 + +0.8 3,503,958 + +0.4 3,503,959 - +0.5 3,503,959 - +0.3 3,503,980 + -0.3 3,504,015 + -0.1 3,504,043 + -0.5 3,504,044 - -0.5 3,504,044 - -0.5 3,504,046 + +0.1 3,504,080 + +0.1 3,504,088 - -0.2 3,504,093 + +1.9 3,504,093 + -0.0 3,504,100 - -0.5 3,504,103 + -0.1 3,504,134 - -0.9 3,504,197 - -0.4 3,504,197 - +0.7 3,504,240 - +0.1 3,504,250 + +1.0 3,504,306 - +0.1 3,504,307 + +0.0 3,504,307 + -0.8 3,504,307 + -0.4 3,504,308 - -0.0 3,504,505 + +0.4 3,504,521 + +0.3 3,504,522 - +0.1 3,504,530 + +0.5 3,504,530 + +0.7 3,504,530 + -0.1 3,504,531 - -0.4 3,504,542 - +0.3 3,504,609 + +0.0 3,504,623 + CA264_14905 0.11 -1.8 3,504,676 + CA264_14905 0.16 -0.4 3,504,723 - CA264_14905 0.21 -0.2 3,504,723 - CA264_14905 0.21 -0.1 3,505,191 + CA264_14905 0.67 +0.1 3,505,329 - CA264_14905 0.80 -1.2 3,505,333 + CA264_14905 0.80 -0.7 3,505,334 - CA264_14905 0.81 -0.1 3,505,334 - CA264_14905 0.81 -0.1 3,505,334 - CA264_14905 0.81 +0.2 3,505,334 - CA264_14905 0.81 -0.4 3,505,344 + CA264_14905 0.82 -1.5 3,505,360 + CA264_14905 0.83 -0.1 3,505,366 + CA264_14905 0.84 -0.8 3,505,367 - CA264_14905 0.84 +0.6 3,505,481 - -0.7 3,505,481 - -0.2 3,505,565 + -0.1 3,505,565 + -0.5 3,505,609 + +0.0 3,505,609 + -1.2 3,505,638 - CA264_14910 0.12 -0.3 3,505,701 + CA264_14910 0.62 -0.2 3,505,722 - CA264_14910 0.79 -2.0 3,505,879 + -0.4 3,505,890 - -0.6 3,505,898 - -0.1 3,505,992 - CA264_14915 0.12 -1.0 3,506,049 + CA264_14915 0.17 -0.4 3,506,050 - CA264_14915 0.17 -0.1 3,506,239 - CA264_14915 0.32 +0.2 3,506,399 - CA264_14915 0.45 +0.0 3,506,403 - CA264_14915 0.45 +0.1 3,506,403 - CA264_14915 0.45 -0.1 3,506,503 + CA264_14915 0.53 +0.2 3,506,504 - CA264_14915 0.53 +1.2
Or see this region's nucleotide sequence