Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13970 and CA264_13975 are separated by 541 nucleotides CA264_13975 and CA264_13980 are separated by 51 nucleotides
CA264_13970: CA264_13970 - glycosyl hydrolase, at 3,267,932 to 3,270,109
_13970
CA264_13975: CA264_13975 - LacI family transcriptional regulator, at 3,270,651 to 3,271,694
_13975
CA264_13980: CA264_13980 - alpha-glucuronidase, at 3,271,746 to 3,273,911
_13980
Position (kb)
3270
3271
3272 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3269.763 kb on + strand, within CA264_13970 at 3269.763 kb on + strand, within CA264_13970 at 3269.763 kb on + strand, within CA264_13970 at 3269.763 kb on + strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.803 kb on + strand, within CA264_13970 at 3269.879 kb on + strand, within CA264_13970 at 3270.095 kb on + strand at 3270.185 kb on - strand at 3270.209 kb on + strand at 3270.465 kb on - strand at 3270.465 kb on - strand at 3270.664 kb on + strand at 3270.664 kb on + strand at 3270.677 kb on + strand at 3270.678 kb on - strand at 3270.678 kb on - strand at 3270.716 kb on + strand at 3270.716 kb on + strand at 3270.856 kb on + strand, within CA264_13975 at 3270.872 kb on + strand, within CA264_13975 at 3270.927 kb on + strand, within CA264_13975 at 3270.940 kb on + strand, within CA264_13975 at 3271.048 kb on + strand, within CA264_13975 at 3271.147 kb on + strand, within CA264_13975 at 3271.147 kb on + strand, within CA264_13975 at 3271.148 kb on - strand, within CA264_13975 at 3271.236 kb on + strand, within CA264_13975 at 3271.533 kb on + strand, within CA264_13975 at 3271.582 kb on - strand, within CA264_13975 at 3271.738 kb on + strand at 3271.827 kb on + strand at 3271.827 kb on + strand at 3271.829 kb on + strand at 3271.830 kb on - strand at 3271.830 kb on - strand at 3271.830 kb on - strand at 3271.830 kb on - strand at 3271.964 kb on + strand, within CA264_13980 at 3271.996 kb on + strand, within CA264_13980 at 3271.997 kb on - strand, within CA264_13980 at 3272.142 kb on + strand, within CA264_13980 at 3272.143 kb on - strand, within CA264_13980 at 3272.305 kb on + strand, within CA264_13980 at 3272.306 kb on - strand, within CA264_13980 at 3272.359 kb on - strand, within CA264_13980 at 3272.362 kb on + strand, within CA264_13980 at 3272.362 kb on + strand, within CA264_13980 at 3272.363 kb on - strand, within CA264_13980 at 3272.363 kb on - strand, within CA264_13980 at 3272.382 kb on + strand, within CA264_13980 at 3272.522 kb on - strand, within CA264_13980 at 3272.527 kb on + strand, within CA264_13980 at 3272.527 kb on + strand, within CA264_13980
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 3,269,763 + CA264_13970 0.84 +0.1 3,269,763 + CA264_13970 0.84 -0.6 3,269,763 + CA264_13970 0.84 +0.1 3,269,763 + CA264_13970 0.84 -0.1 3,269,764 - CA264_13970 0.84 -1.2 3,269,764 - CA264_13970 0.84 -0.1 3,269,764 - CA264_13970 0.84 -0.3 3,269,764 - CA264_13970 0.84 -0.6 3,269,764 - CA264_13970 0.84 +0.3 3,269,803 + CA264_13970 0.86 +0.1 3,269,879 + CA264_13970 0.89 -0.4 3,270,095 + -0.0 3,270,185 - -0.3 3,270,209 + -0.1 3,270,465 - -0.9 3,270,465 - -0.5 3,270,664 + -0.1 3,270,664 + +0.3 3,270,677 + -1.0 3,270,678 - -0.8 3,270,678 - -0.0 3,270,716 + -0.2 3,270,716 + +0.0 3,270,856 + CA264_13975 0.20 -1.6 3,270,872 + CA264_13975 0.21 -1.2 3,270,927 + CA264_13975 0.26 -0.3 3,270,940 + CA264_13975 0.28 -0.9 3,271,048 + CA264_13975 0.38 -1.0 3,271,147 + CA264_13975 0.48 -2.9 3,271,147 + CA264_13975 0.48 -0.2 3,271,148 - CA264_13975 0.48 -0.9 3,271,236 + CA264_13975 0.56 +1.6 3,271,533 + CA264_13975 0.84 +1.0 3,271,582 - CA264_13975 0.89 -0.7 3,271,738 + -1.6 3,271,827 + -0.4 3,271,827 + +1.0 3,271,829 + -0.2 3,271,830 - -0.4 3,271,830 - -1.5 3,271,830 - +0.3 3,271,830 - +0.5 3,271,964 + CA264_13980 0.10 -1.9 3,271,996 + CA264_13980 0.12 -1.0 3,271,997 - CA264_13980 0.12 -2.4 3,272,142 + CA264_13980 0.18 -0.8 3,272,143 - CA264_13980 0.18 -0.1 3,272,305 + CA264_13980 0.26 +0.3 3,272,306 - CA264_13980 0.26 -1.1 3,272,359 - CA264_13980 0.28 -0.4 3,272,362 + CA264_13980 0.28 -0.3 3,272,362 + CA264_13980 0.28 -0.1 3,272,363 - CA264_13980 0.28 +1.1 3,272,363 - CA264_13980 0.28 -0.9 3,272,382 + CA264_13980 0.29 -0.3 3,272,522 - CA264_13980 0.36 -0.1 3,272,527 + CA264_13980 0.36 -0.0 3,272,527 + CA264_13980 0.36 +0.9
Or see this region's nucleotide sequence