Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_13785

Experiment: m.b. Cobalt chloride 0.05 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_13780 and CA264_13785 are separated by 112 nucleotidesCA264_13785 and CA264_13790 are separated by 60 nucleotidesCA264_13790 and CA264_13795 are separated by 4 nucleotides CA264_13780: CA264_13780 - ribonuclease Y, at 3,220,367 to 3,221,965 _13780 CA264_13785: CA264_13785 - cell division protein ZapA, at 3,222,078 to 3,222,365 _13785 CA264_13790: CA264_13790 - hypothetical protein, at 3,222,426 to 3,222,722 _13790 CA264_13795: CA264_13795 - phenylalanine--tRNA ligase subunit beta, at 3,222,727 to 3,225,144 _13795 Position (kb) 3222 3223Strain fitness (log2 ratio) -2 -1 0 1at 3221.969 kb on + strandat 3221.969 kb on + strandat 3221.970 kb on - strandat 3221.989 kb on - strandat 3221.995 kb on + strandat 3221.996 kb on - strandat 3221.996 kb on - strandat 3221.996 kb on - strandat 3221.998 kb on - strandat 3222.086 kb on + strandat 3222.097 kb on - strandat 3222.525 kb on - strand, within CA264_13790at 3222.536 kb on + strand, within CA264_13790at 3222.537 kb on - strand, within CA264_13790at 3222.610 kb on - strand, within CA264_13790at 3222.728 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM
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3,221,969 + +0.3
3,221,969 + -1.0
3,221,970 - -0.5
3,221,989 - +0.0
3,221,995 + +0.0
3,221,996 - +0.3
3,221,996 - -0.1
3,221,996 - +1.1
3,221,998 - -0.2
3,222,086 + -0.4
3,222,097 - -1.8
3,222,525 - CA264_13790 0.33 +0.4
3,222,536 + CA264_13790 0.37 +0.3
3,222,537 - CA264_13790 0.37 -0.8
3,222,610 - CA264_13790 0.62 +0.2
3,222,728 + -0.0

Or see this region's nucleotide sequence