Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13550 and CA264_13555 are separated by 197 nucleotides CA264_13555 and CA264_13560 are separated by 177 nucleotides CA264_13560 and CA264_13565 are separated by 157 nucleotides
CA264_13550: CA264_13550 - hypothetical protein, at 3,163,147 to 3,164,622
_13550
CA264_13555: CA264_13555 - hypothetical protein, at 3,164,820 to 3,165,110
_13555
CA264_13560: CA264_13560 - membrane protein insertion efficiency factor YidD, at 3,165,288 to 3,165,509
_13560
CA264_13565: CA264_13565 - serine protease, at 3,165,667 to 3,167,916
_13565
Position (kb)
3165
3166 Strain fitness (log2 ratio)
-1
0
1 at 3164.345 kb on + strand, within CA264_13550 at 3164.345 kb on + strand, within CA264_13550 at 3164.519 kb on + strand at 3164.520 kb on - strand at 3164.544 kb on + strand at 3164.545 kb on - strand at 3164.545 kb on - strand at 3164.586 kb on - strand at 3164.586 kb on - strand at 3164.622 kb on + strand at 3164.623 kb on - strand at 3164.623 kb on - strand at 3164.625 kb on - strand at 3164.638 kb on - strand at 3164.638 kb on - strand at 3164.640 kb on + strand at 3164.643 kb on - strand at 3164.643 kb on - strand at 3164.644 kb on + strand at 3164.656 kb on + strand at 3164.656 kb on + strand at 3164.664 kb on + strand at 3164.724 kb on - strand at 3164.727 kb on + strand at 3164.822 kb on - strand at 3164.823 kb on + strand at 3164.944 kb on + strand, within CA264_13555 at 3164.948 kb on + strand, within CA264_13555 at 3164.948 kb on + strand, within CA264_13555 at 3164.956 kb on + strand, within CA264_13555 at 3165.024 kb on + strand, within CA264_13555 at 3165.024 kb on + strand, within CA264_13555 at 3165.105 kb on + strand at 3165.124 kb on + strand at 3165.155 kb on - strand at 3165.164 kb on - strand at 3165.168 kb on - strand at 3165.191 kb on + strand at 3165.191 kb on + strand at 3165.192 kb on - strand at 3165.197 kb on - strand at 3165.204 kb on - strand at 3165.217 kb on - strand at 3165.289 kb on + strand at 3165.289 kb on + strand at 3165.290 kb on - strand at 3165.377 kb on - strand, within CA264_13560 at 3165.400 kb on + strand, within CA264_13560 at 3165.548 kb on - strand at 3165.570 kb on + strand at 3165.575 kb on - strand at 3165.666 kb on + strand at 3165.701 kb on - strand at 3165.804 kb on + strand at 3165.805 kb on - strand at 3166.001 kb on + strand, within CA264_13565 at 3166.002 kb on - strand, within CA264_13565 at 3166.102 kb on + strand, within CA264_13565 at 3166.102 kb on + strand, within CA264_13565 at 3166.103 kb on - strand, within CA264_13565 at 3166.103 kb on - strand, within CA264_13565 at 3166.103 kb on - strand, within CA264_13565 at 3166.111 kb on + strand, within CA264_13565 at 3166.176 kb on - strand, within CA264_13565 at 3166.184 kb on + strand, within CA264_13565 at 3166.184 kb on + strand, within CA264_13565 at 3166.266 kb on + strand, within CA264_13565 at 3166.267 kb on - strand, within CA264_13565 at 3166.267 kb on - strand, within CA264_13565 at 3166.267 kb on - strand, within CA264_13565 at 3166.277 kb on + strand, within CA264_13565 at 3166.279 kb on + strand, within CA264_13565 at 3166.280 kb on - strand, within CA264_13565 at 3166.280 kb on - strand, within CA264_13565 at 3166.280 kb on - strand, within CA264_13565 at 3166.325 kb on + strand, within CA264_13565 at 3166.330 kb on + strand, within CA264_13565 at 3166.330 kb on + strand, within CA264_13565 at 3166.330 kb on + strand at 3166.331 kb on - strand, within CA264_13565
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 3,164,345 + CA264_13550 0.81 -0.3 3,164,345 + CA264_13550 0.81 -0.4 3,164,519 + -0.8 3,164,520 - +0.6 3,164,544 + +0.4 3,164,545 - -0.4 3,164,545 - +0.1 3,164,586 - +0.3 3,164,586 - +0.2 3,164,622 + -0.3 3,164,623 - -1.1 3,164,623 - -0.1 3,164,625 - +0.2 3,164,638 - +0.3 3,164,638 - -0.1 3,164,640 + +0.0 3,164,643 - -0.5 3,164,643 - +0.0 3,164,644 + -0.0 3,164,656 + +0.6 3,164,656 + +0.1 3,164,664 + -0.2 3,164,724 - -0.4 3,164,727 + +0.6 3,164,822 - -0.4 3,164,823 + -0.3 3,164,944 + CA264_13555 0.43 -1.0 3,164,948 + CA264_13555 0.44 -1.6 3,164,948 + CA264_13555 0.44 -0.5 3,164,956 + CA264_13555 0.47 -0.3 3,165,024 + CA264_13555 0.70 +0.2 3,165,024 + CA264_13555 0.70 -0.0 3,165,105 + -0.2 3,165,124 + +0.7 3,165,155 - +0.4 3,165,164 - -0.1 3,165,168 - -0.3 3,165,191 + +0.1 3,165,191 + +0.4 3,165,192 - +1.6 3,165,197 - +0.1 3,165,204 - +0.0 3,165,217 - -0.3 3,165,289 + +0.0 3,165,289 + -0.0 3,165,290 - -0.5 3,165,377 - CA264_13560 0.40 -0.0 3,165,400 + CA264_13560 0.50 -0.5 3,165,548 - +0.1 3,165,570 + +0.5 3,165,575 - +0.8 3,165,666 + +0.6 3,165,701 - +0.0 3,165,804 + -0.2 3,165,805 - -0.8 3,166,001 + CA264_13565 0.15 +0.1 3,166,002 - CA264_13565 0.15 +0.2 3,166,102 + CA264_13565 0.19 -0.6 3,166,102 + CA264_13565 0.19 +1.3 3,166,103 - CA264_13565 0.19 +0.2 3,166,103 - CA264_13565 0.19 +0.3 3,166,103 - CA264_13565 0.19 +0.1 3,166,111 + CA264_13565 0.20 -1.4 3,166,176 - CA264_13565 0.23 -0.3 3,166,184 + CA264_13565 0.23 +0.4 3,166,184 + CA264_13565 0.23 -0.1 3,166,266 + CA264_13565 0.27 -0.4 3,166,267 - CA264_13565 0.27 +0.1 3,166,267 - CA264_13565 0.27 -0.2 3,166,267 - CA264_13565 0.27 +0.5 3,166,277 + CA264_13565 0.27 +0.0 3,166,279 + CA264_13565 0.27 -0.8 3,166,280 - CA264_13565 0.27 -0.2 3,166,280 - CA264_13565 0.27 -0.3 3,166,280 - CA264_13565 0.27 +0.1 3,166,325 + CA264_13565 0.29 +0.3 3,166,330 + CA264_13565 0.29 -0.4 3,166,330 + CA264_13565 0.29 -0.5 3,166,330 + +1.0 3,166,331 - CA264_13565 0.30 +0.4
Or see this region's nucleotide sequence