Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12715 and CA264_12720 are separated by 295 nucleotides CA264_12720 and CA264_12725 are separated by 156 nucleotides
CA264_12715: CA264_12715 - peptidase M61, at 2,963,463 to 2,965,295
_12715
CA264_12720: CA264_12720 - hypothetical protein, at 2,965,591 to 2,966,046
_12720
CA264_12725: CA264_12725 - hypothetical protein, at 2,966,203 to 2,967,216
_12725
Position (kb)
2965
2966
2967 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2964.650 kb on + strand, within CA264_12715 at 2964.657 kb on + strand, within CA264_12715 at 2964.660 kb on + strand, within CA264_12715 at 2964.661 kb on - strand, within CA264_12715 at 2964.666 kb on + strand, within CA264_12715 at 2964.666 kb on + strand, within CA264_12715 at 2964.667 kb on - strand, within CA264_12715 at 2964.715 kb on - strand, within CA264_12715 at 2964.759 kb on + strand, within CA264_12715 at 2964.760 kb on - strand, within CA264_12715 at 2964.929 kb on + strand, within CA264_12715 at 2965.009 kb on + strand, within CA264_12715 at 2965.010 kb on - strand, within CA264_12715 at 2965.026 kb on - strand, within CA264_12715 at 2965.037 kb on - strand, within CA264_12715 at 2965.149 kb on - strand at 2965.195 kb on + strand at 2965.210 kb on + strand at 2965.240 kb on + strand at 2965.407 kb on + strand at 2965.415 kb on + strand at 2965.415 kb on + strand at 2965.418 kb on + strand at 2965.580 kb on - strand at 2965.630 kb on + strand at 2965.631 kb on - strand at 2965.635 kb on - strand at 2965.635 kb on - strand at 2965.635 kb on - strand at 2965.694 kb on - strand, within CA264_12720 at 2965.711 kb on + strand, within CA264_12720 at 2965.711 kb on + strand, within CA264_12720 at 2965.711 kb on + strand, within CA264_12720 at 2965.753 kb on + strand, within CA264_12720 at 2965.753 kb on + strand, within CA264_12720 at 2965.754 kb on - strand, within CA264_12720 at 2965.778 kb on - strand, within CA264_12720 at 2965.888 kb on + strand, within CA264_12720 at 2965.948 kb on - strand, within CA264_12720 at 2966.048 kb on + strand at 2966.069 kb on - strand at 2966.175 kb on - strand at 2966.176 kb on + strand at 2966.178 kb on + strand at 2966.214 kb on + strand at 2966.256 kb on + strand at 2966.270 kb on - strand at 2966.398 kb on + strand, within CA264_12725 at 2966.398 kb on + strand, within CA264_12725 at 2966.398 kb on + strand, within CA264_12725 at 2966.499 kb on + strand, within CA264_12725 at 2966.597 kb on + strand, within CA264_12725 at 2966.597 kb on + strand, within CA264_12725 at 2966.598 kb on - strand, within CA264_12725 at 2966.598 kb on - strand, within CA264_12725 at 2966.673 kb on - strand, within CA264_12725 at 2966.705 kb on + strand, within CA264_12725 at 2966.705 kb on + strand, within CA264_12725 at 2966.705 kb on + strand, within CA264_12725 at 2966.706 kb on - strand, within CA264_12725 at 2966.762 kb on - strand, within CA264_12725 at 2966.890 kb on + strand, within CA264_12725 at 2966.923 kb on + strand, within CA264_12725 at 2966.933 kb on + strand, within CA264_12725 at 2966.984 kb on - strand, within CA264_12725 at 2966.984 kb on - strand, within CA264_12725
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 2,964,650 + CA264_12715 0.65 +0.5 2,964,657 + CA264_12715 0.65 -0.1 2,964,660 + CA264_12715 0.65 -0.3 2,964,661 - CA264_12715 0.65 +0.2 2,964,666 + CA264_12715 0.66 -0.1 2,964,666 + CA264_12715 0.66 -1.6 2,964,667 - CA264_12715 0.66 -0.5 2,964,715 - CA264_12715 0.68 +0.0 2,964,759 + CA264_12715 0.71 -1.6 2,964,760 - CA264_12715 0.71 -1.1 2,964,929 + CA264_12715 0.80 -0.1 2,965,009 + CA264_12715 0.84 -0.3 2,965,010 - CA264_12715 0.84 +0.3 2,965,026 - CA264_12715 0.85 +0.5 2,965,037 - CA264_12715 0.86 -0.1 2,965,149 - -0.5 2,965,195 + -0.2 2,965,210 + -0.1 2,965,240 + -0.3 2,965,407 + -0.1 2,965,415 + -1.5 2,965,415 + -1.4 2,965,418 + -0.2 2,965,580 - +0.0 2,965,630 + -0.5 2,965,631 - -1.3 2,965,635 - +1.1 2,965,635 - -0.4 2,965,635 - -0.1 2,965,694 - CA264_12720 0.23 +1.3 2,965,711 + CA264_12720 0.26 +0.4 2,965,711 + CA264_12720 0.26 +0.1 2,965,711 + CA264_12720 0.26 +0.7 2,965,753 + CA264_12720 0.36 -0.4 2,965,753 + CA264_12720 0.36 +0.8 2,965,754 - CA264_12720 0.36 -0.2 2,965,778 - CA264_12720 0.41 -1.4 2,965,888 + CA264_12720 0.65 +2.2 2,965,948 - CA264_12720 0.78 +0.8 2,966,048 + +0.3 2,966,069 - +0.5 2,966,175 - -0.6 2,966,176 + -0.8 2,966,178 + -0.1 2,966,214 + -0.5 2,966,256 + -0.1 2,966,270 - -2.1 2,966,398 + CA264_12725 0.19 -1.9 2,966,398 + CA264_12725 0.19 +0.4 2,966,398 + CA264_12725 0.19 -1.1 2,966,499 + CA264_12725 0.29 -2.7 2,966,597 + CA264_12725 0.39 -0.0 2,966,597 + CA264_12725 0.39 -0.9 2,966,598 - CA264_12725 0.39 -0.4 2,966,598 - CA264_12725 0.39 -0.8 2,966,673 - CA264_12725 0.46 +0.5 2,966,705 + CA264_12725 0.50 -0.3 2,966,705 + CA264_12725 0.50 +0.2 2,966,705 + CA264_12725 0.50 -0.4 2,966,706 - CA264_12725 0.50 +0.1 2,966,762 - CA264_12725 0.55 +0.5 2,966,890 + CA264_12725 0.68 +0.2 2,966,923 + CA264_12725 0.71 -0.1 2,966,933 + CA264_12725 0.72 -0.5 2,966,984 - CA264_12725 0.77 +1.3 2,966,984 - CA264_12725 0.77 -0.8
Or see this region's nucleotide sequence