Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11360

Experiment: m.b. Cobalt chloride 0.05 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11355 and CA264_11360 are separated by 439 nucleotidesCA264_11360 and CA264_11365 are separated by 58 nucleotidesCA264_11365 and CA264_11370 are separated by 277 nucleotides CA264_11355: CA264_11355 - FAD-dependent oxidoreductase, at 2,631,189 to 2,632,751 _11355 CA264_11360: CA264_11360 - hypothetical protein, at 2,633,191 to 2,633,424 _11360 CA264_11365: CA264_11365 - hypothetical protein, at 2,633,483 to 2,633,989 _11365 CA264_11370: CA264_11370 - hypothetical protein, at 2,634,267 to 2,635,025 _11370 Position (kb) 2633 2634Strain fitness (log2 ratio) -2 -1 0 1at 2632.487 kb on + strand, within CA264_11355at 2632.926 kb on + strandat 2632.926 kb on + strandat 2632.929 kb on + strandat 2632.937 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.956 kb on - strandat 2633.106 kb on + strandat 2633.107 kb on - strandat 2633.136 kb on + strandat 2633.136 kb on + strandat 2633.137 kb on - strandat 2633.137 kb on - strandat 2633.138 kb on + strandat 2633.139 kb on - strandat 2633.140 kb on + strandat 2633.140 kb on + strandat 2633.141 kb on - strandat 2633.141 kb on - strandat 2633.141 kb on - strandat 2633.197 kb on + strandat 2633.197 kb on + strandat 2633.214 kb on - strandat 2633.250 kb on + strand, within CA264_11360at 2633.294 kb on - strand, within CA264_11360at 2633.366 kb on + strand, within CA264_11360at 2633.386 kb on - strand, within CA264_11360at 2633.410 kb on + strandat 2633.418 kb on + strandat 2633.423 kb on - strandat 2633.423 kb on - strandat 2633.442 kb on - strandat 2633.461 kb on + strandat 2633.462 kb on - strandat 2633.463 kb on + strandat 2633.464 kb on - strandat 2633.493 kb on + strandat 2633.523 kb on - strandat 2633.553 kb on + strand, within CA264_11365at 2633.579 kb on - strand, within CA264_11365at 2633.584 kb on + strand, within CA264_11365at 2633.584 kb on + strand, within CA264_11365at 2633.585 kb on - strand, within CA264_11365at 2633.585 kb on - strand, within CA264_11365at 2633.592 kb on - strand, within CA264_11365at 2633.613 kb on - strand, within CA264_11365at 2633.668 kb on - strand, within CA264_11365at 2633.676 kb on + strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.711 kb on - strand, within CA264_11365at 2633.711 kb on - strand, within CA264_11365at 2633.711 kb on - strand, within CA264_11365at 2633.720 kb on - strand, within CA264_11365at 2633.727 kb on - strand, within CA264_11365at 2633.745 kb on - strand, within CA264_11365at 2633.758 kb on + strand, within CA264_11365at 2633.893 kb on + strand, within CA264_11365at 2633.894 kb on - strand, within CA264_11365at 2633.898 kb on - strand, within CA264_11365at 2633.900 kb on + strand, within CA264_11365at 2633.901 kb on - strand, within CA264_11365at 2633.901 kb on - strand, within CA264_11365at 2633.902 kb on + strand, within CA264_11365at 2633.902 kb on + strand, within CA264_11365at 2633.902 kb on + strand, within CA264_11365at 2633.902 kb on + strand, within CA264_11365at 2633.902 kb on + strand, within CA264_11365at 2633.902 kb on + strand, within CA264_11365at 2633.902 kb on + strand, within CA264_11365at 2633.903 kb on - strand, within CA264_11365at 2633.903 kb on - strand, within CA264_11365at 2633.903 kb on - strand, within CA264_11365at 2633.916 kb on + strand, within CA264_11365at 2633.932 kb on + strand, within CA264_11365at 2633.937 kb on - strand, within CA264_11365at 2633.957 kb on + strandat 2633.993 kb on - strandat 2634.070 kb on - strandat 2634.072 kb on - strandat 2634.092 kb on - strandat 2634.107 kb on + strandat 2634.132 kb on + strandat 2634.234 kb on + strandat 2634.234 kb on + strandat 2634.248 kb on - strandat 2634.248 kb on - strandat 2634.353 kb on - strand, within CA264_11370at 2634.388 kb on + strand, within CA264_11370at 2634.388 kb on + strand, within CA264_11370at 2634.393 kb on - strand, within CA264_11370at 2634.393 kb on - strand, within CA264_11370at 2634.394 kb on + strand, within CA264_11370at 2634.394 kb on + strand, within CA264_11370at 2634.395 kb on - strand, within CA264_11370at 2634.400 kb on + strand, within CA264_11370

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM
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2,632,487 + CA264_11355 0.83 -2.1
2,632,926 + -0.5
2,632,926 + -0.1
2,632,929 + +0.4
2,632,937 + -1.2
2,632,955 + +0.2
2,632,955 + -0.6
2,632,955 + -0.0
2,632,955 + -0.0
2,632,955 + +0.1
2,632,955 + -0.6
2,632,955 + +0.1
2,632,955 + -1.0
2,632,956 - +1.0
2,633,106 + -0.9
2,633,107 - +0.6
2,633,136 + -0.3
2,633,136 + -0.4
2,633,137 - -0.3
2,633,137 - +0.1
2,633,138 + +0.9
2,633,139 - -0.3
2,633,140 + -2.5
2,633,140 + +1.2
2,633,141 - +0.2
2,633,141 - -0.3
2,633,141 - +0.3
2,633,197 + +0.9
2,633,197 + -1.5
2,633,214 - +0.7
2,633,250 + CA264_11360 0.25 -0.1
2,633,294 - CA264_11360 0.44 +0.2
2,633,366 + CA264_11360 0.75 +0.4
2,633,386 - CA264_11360 0.83 +0.2
2,633,410 + -1.5
2,633,418 + -0.6
2,633,423 - -1.1
2,633,423 - -0.1
2,633,442 - +0.2
2,633,461 + -0.2
2,633,462 - +0.5
2,633,463 + +0.1
2,633,464 - -0.5
2,633,493 + -1.5
2,633,523 - -0.0
2,633,553 + CA264_11365 0.14 -0.2
2,633,579 - CA264_11365 0.19 +0.0
2,633,584 + CA264_11365 0.20 +0.1
2,633,584 + CA264_11365 0.20 -0.2
2,633,585 - CA264_11365 0.20 +0.4
2,633,585 - CA264_11365 0.20 +1.6
2,633,592 - CA264_11365 0.21 -0.1
2,633,613 - CA264_11365 0.26 -0.0
2,633,668 - CA264_11365 0.36 -0.3
2,633,676 + CA264_11365 0.38 -0.3
2,633,682 - CA264_11365 0.39 +0.9
2,633,682 - CA264_11365 0.39 +0.7
2,633,682 - CA264_11365 0.39 -0.7
2,633,682 - CA264_11365 0.39 -0.5
2,633,682 - CA264_11365 0.39 +0.1
2,633,682 - CA264_11365 0.39 +0.0
2,633,711 - CA264_11365 0.45 -1.1
2,633,711 - CA264_11365 0.45 -0.5
2,633,711 - CA264_11365 0.45 +0.1
2,633,720 - CA264_11365 0.47 -0.0
2,633,727 - CA264_11365 0.48 +0.3
2,633,745 - CA264_11365 0.52 +0.0
2,633,758 + CA264_11365 0.54 -0.2
2,633,893 + CA264_11365 0.81 -0.1
2,633,894 - CA264_11365 0.81 -0.1
2,633,898 - CA264_11365 0.82 +0.1
2,633,900 + CA264_11365 0.82 +0.4
2,633,901 - CA264_11365 0.82 +0.1
2,633,901 - CA264_11365 0.82 -1.0
2,633,902 + CA264_11365 0.83 -0.2
2,633,902 + CA264_11365 0.83 -0.5
2,633,902 + CA264_11365 0.83 -0.1
2,633,902 + CA264_11365 0.83 +0.0
2,633,902 + CA264_11365 0.83 -0.4
2,633,902 + CA264_11365 0.83 -1.0
2,633,902 + CA264_11365 0.83 -0.7
2,633,903 - CA264_11365 0.83 -0.4
2,633,903 - CA264_11365 0.83 +0.7
2,633,903 - CA264_11365 0.83 -0.8
2,633,916 + CA264_11365 0.85 -1.6
2,633,932 + CA264_11365 0.89 -0.3
2,633,937 - CA264_11365 0.90 +0.1
2,633,957 + -0.1
2,633,993 - -0.1
2,634,070 - +0.7
2,634,072 - -0.4
2,634,092 - -0.1
2,634,107 + -0.5
2,634,132 + -0.1
2,634,234 + +0.0
2,634,234 + +0.4
2,634,248 - -0.4
2,634,248 - +0.6
2,634,353 - CA264_11370 0.11 +0.3
2,634,388 + CA264_11370 0.16 +0.1
2,634,388 + CA264_11370 0.16 +0.4
2,634,393 - CA264_11370 0.17 +0.7
2,634,393 - CA264_11370 0.17 -0.1
2,634,394 + CA264_11370 0.17 +0.4
2,634,394 + CA264_11370 0.17 -0.6
2,634,395 - CA264_11370 0.17 -1.0
2,634,400 + CA264_11370 0.18 -0.5

Or see this region's nucleotide sequence