Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10355

Experiment: m.b. Cobalt chloride 0.05 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10350 and CA264_10355 are separated by 134 nucleotidesCA264_10355 and CA264_10360 are separated by 85 nucleotides CA264_10350: CA264_10350 - hypothetical protein, at 2,405,927 to 2,407,333 _10350 CA264_10355: CA264_10355 - hypothetical protein, at 2,407,468 to 2,408,946 _10355 CA264_10360: CA264_10360 - hypothetical protein, at 2,409,032 to 2,410,042 _10360 Position (kb) 2407 2408 2409Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2406.517 kb on + strand, within CA264_10350at 2406.518 kb on - strand, within CA264_10350at 2406.573 kb on - strand, within CA264_10350at 2406.576 kb on + strand, within CA264_10350at 2406.577 kb on - strand, within CA264_10350at 2406.577 kb on - strand, within CA264_10350at 2406.581 kb on + strand, within CA264_10350at 2406.596 kb on - strand, within CA264_10350at 2406.599 kb on + strand, within CA264_10350at 2406.600 kb on - strand, within CA264_10350at 2406.603 kb on - strand, within CA264_10350at 2406.676 kb on - strand, within CA264_10350at 2406.692 kb on + strand, within CA264_10350at 2406.735 kb on - strand, within CA264_10350at 2406.739 kb on + strand, within CA264_10350at 2406.739 kb on - strand, within CA264_10350at 2406.803 kb on + strand, within CA264_10350at 2406.811 kb on + strand, within CA264_10350at 2406.811 kb on + strand, within CA264_10350at 2406.811 kb on + strand, within CA264_10350at 2406.812 kb on - strand, within CA264_10350at 2406.812 kb on - strand, within CA264_10350at 2406.814 kb on - strand, within CA264_10350at 2406.814 kb on - strand, within CA264_10350at 2406.841 kb on - strand, within CA264_10350at 2406.857 kb on - strand, within CA264_10350at 2406.902 kb on - strand, within CA264_10350at 2406.923 kb on + strand, within CA264_10350at 2406.924 kb on - strand, within CA264_10350at 2406.928 kb on + strand, within CA264_10350at 2406.929 kb on - strand, within CA264_10350at 2406.929 kb on - strand, within CA264_10350at 2406.931 kb on - strand, within CA264_10350at 2406.931 kb on - strand, within CA264_10350at 2406.947 kb on - strand, within CA264_10350at 2406.964 kb on - strand, within CA264_10350at 2406.968 kb on - strand, within CA264_10350at 2406.982 kb on + strand, within CA264_10350at 2407.019 kb on + strand, within CA264_10350at 2407.019 kb on + strand, within CA264_10350at 2407.087 kb on + strand, within CA264_10350at 2407.113 kb on + strand, within CA264_10350at 2407.113 kb on + strand, within CA264_10350at 2407.118 kb on + strand, within CA264_10350at 2407.193 kb on + strandat 2407.194 kb on - strandat 2407.194 kb on - strandat 2407.195 kb on + strandat 2407.196 kb on - strandat 2407.209 kb on + strandat 2407.210 kb on - strandat 2407.210 kb on - strandat 2407.279 kb on - strandat 2407.291 kb on - strandat 2407.331 kb on + strandat 2407.426 kb on - strandat 2407.438 kb on - strandat 2407.445 kb on - strandat 2407.448 kb on + strandat 2407.451 kb on + strandat 2407.530 kb on + strandat 2407.531 kb on - strandat 2407.531 kb on - strandat 2407.567 kb on - strandat 2407.601 kb on + strandat 2407.602 kb on - strandat 2407.647 kb on + strand, within CA264_10355at 2407.648 kb on - strand, within CA264_10355at 2407.648 kb on - strand, within CA264_10355at 2407.655 kb on - strand, within CA264_10355at 2407.657 kb on + strand, within CA264_10355at 2407.658 kb on - strand, within CA264_10355at 2407.672 kb on - strand, within CA264_10355at 2407.680 kb on + strand, within CA264_10355at 2407.680 kb on + strand, within CA264_10355at 2407.681 kb on - strand, within CA264_10355at 2407.683 kb on + strand, within CA264_10355at 2407.713 kb on - strand, within CA264_10355at 2407.713 kb on - strand, within CA264_10355at 2407.800 kb on + strand, within CA264_10355at 2407.801 kb on - strand, within CA264_10355at 2407.855 kb on - strand, within CA264_10355at 2407.875 kb on - strand, within CA264_10355at 2407.918 kb on + strand, within CA264_10355at 2407.933 kb on + strand, within CA264_10355at 2407.934 kb on - strand, within CA264_10355at 2407.951 kb on + strand, within CA264_10355at 2408.011 kb on + strand, within CA264_10355at 2408.013 kb on + strand, within CA264_10355at 2408.014 kb on - strand, within CA264_10355at 2408.033 kb on + strand, within CA264_10355at 2408.054 kb on + strand, within CA264_10355at 2408.055 kb on - strand, within CA264_10355at 2408.055 kb on - strand, within CA264_10355at 2408.082 kb on + strand, within CA264_10355at 2408.091 kb on + strand, within CA264_10355at 2408.150 kb on - strand, within CA264_10355at 2408.164 kb on - strand, within CA264_10355at 2408.222 kb on + strand, within CA264_10355at 2408.296 kb on - strand, within CA264_10355at 2408.309 kb on + strand, within CA264_10355at 2408.310 kb on - strand, within CA264_10355at 2408.310 kb on - strand, within CA264_10355at 2408.330 kb on + strand, within CA264_10355at 2408.330 kb on + strand, within CA264_10355at 2408.331 kb on - strand, within CA264_10355at 2408.411 kb on - strand, within CA264_10355at 2408.414 kb on - strand, within CA264_10355at 2408.474 kb on + strand, within CA264_10355at 2408.508 kb on + strand, within CA264_10355at 2408.509 kb on - strand, within CA264_10355at 2408.518 kb on + strand, within CA264_10355at 2408.602 kb on + strand, within CA264_10355at 2408.603 kb on - strand, within CA264_10355at 2408.606 kb on + strand, within CA264_10355at 2408.606 kb on + strand, within CA264_10355at 2408.606 kb on + strand, within CA264_10355at 2408.607 kb on - strand, within CA264_10355at 2408.607 kb on - strand, within CA264_10355at 2408.614 kb on + strand, within CA264_10355at 2408.624 kb on - strand, within CA264_10355at 2408.671 kb on + strand, within CA264_10355at 2408.677 kb on - strand, within CA264_10355at 2408.712 kb on + strand, within CA264_10355at 2408.713 kb on - strand, within CA264_10355at 2408.735 kb on + strand, within CA264_10355at 2408.736 kb on - strand, within CA264_10355at 2408.807 kb on - strandat 2408.941 kb on - strandat 2408.951 kb on - strandat 2409.225 kb on + strand, within CA264_10360at 2409.315 kb on + strand, within CA264_10360at 2409.315 kb on + strand, within CA264_10360at 2409.315 kb on + strand, within CA264_10360at 2409.327 kb on + strand, within CA264_10360at 2409.327 kb on + strand, within CA264_10360at 2409.427 kb on + strand, within CA264_10360at 2409.498 kb on + strand, within CA264_10360at 2409.498 kb on + strand, within CA264_10360at 2409.498 kb on + strand, within CA264_10360at 2409.505 kb on + strand, within CA264_10360at 2409.561 kb on + strand, within CA264_10360at 2409.645 kb on + strand, within CA264_10360at 2409.714 kb on + strand, within CA264_10360

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM
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2,406,517 + CA264_10350 0.42 +0.7
2,406,518 - CA264_10350 0.42 +0.0
2,406,573 - CA264_10350 0.46 -0.4
2,406,576 + CA264_10350 0.46 -0.2
2,406,577 - CA264_10350 0.46 -0.1
2,406,577 - CA264_10350 0.46 +0.8
2,406,581 + CA264_10350 0.46 -0.4
2,406,596 - CA264_10350 0.48 +0.4
2,406,599 + CA264_10350 0.48 -0.4
2,406,600 - CA264_10350 0.48 -0.8
2,406,603 - CA264_10350 0.48 -0.1
2,406,676 - CA264_10350 0.53 -0.6
2,406,692 + CA264_10350 0.54 -1.2
2,406,735 - CA264_10350 0.57 -0.2
2,406,739 + CA264_10350 0.58 -0.2
2,406,739 - CA264_10350 0.58 -0.9
2,406,803 + CA264_10350 0.62 +0.3
2,406,811 + CA264_10350 0.63 -1.4
2,406,811 + CA264_10350 0.63 -0.4
2,406,811 + CA264_10350 0.63 -0.4
2,406,812 - CA264_10350 0.63 -0.9
2,406,812 - CA264_10350 0.63 -0.3
2,406,814 - CA264_10350 0.63 -0.7
2,406,814 - CA264_10350 0.63 +0.2
2,406,841 - CA264_10350 0.65 -0.3
2,406,857 - CA264_10350 0.66 -0.0
2,406,902 - CA264_10350 0.69 -2.0
2,406,923 + CA264_10350 0.71 -0.3
2,406,924 - CA264_10350 0.71 +0.6
2,406,928 + CA264_10350 0.71 -0.7
2,406,929 - CA264_10350 0.71 +0.2
2,406,929 - CA264_10350 0.71 -0.3
2,406,931 - CA264_10350 0.71 +0.3
2,406,931 - CA264_10350 0.71 -0.5
2,406,947 - CA264_10350 0.72 +0.5
2,406,964 - CA264_10350 0.74 +0.0
2,406,968 - CA264_10350 0.74 +1.0
2,406,982 + CA264_10350 0.75 +0.1
2,407,019 + CA264_10350 0.78 +0.8
2,407,019 + CA264_10350 0.78 -0.0
2,407,087 + CA264_10350 0.82 +0.9
2,407,113 + CA264_10350 0.84 -0.1
2,407,113 + CA264_10350 0.84 -0.3
2,407,118 + CA264_10350 0.85 -0.8
2,407,193 + +0.1
2,407,194 - +0.4
2,407,194 - +0.5
2,407,195 + +0.1
2,407,196 - -0.6
2,407,209 + -0.2
2,407,210 - +1.0
2,407,210 - -0.1
2,407,279 - -0.3
2,407,291 - +0.0
2,407,331 + -0.1
2,407,426 - -0.3
2,407,438 - -0.2
2,407,445 - -0.6
2,407,448 + -1.8
2,407,451 + +0.1
2,407,530 + -1.4
2,407,531 - -0.7
2,407,531 - -0.1
2,407,567 - -0.6
2,407,601 + -0.6
2,407,602 - -0.1
2,407,647 + CA264_10355 0.12 +0.2
2,407,648 - CA264_10355 0.12 -0.4
2,407,648 - CA264_10355 0.12 -0.5
2,407,655 - CA264_10355 0.13 +3.1
2,407,657 + CA264_10355 0.13 -0.5
2,407,658 - CA264_10355 0.13 -0.8
2,407,672 - CA264_10355 0.14 +0.1
2,407,680 + CA264_10355 0.14 -1.5
2,407,680 + CA264_10355 0.14 -0.4
2,407,681 - CA264_10355 0.14 -1.3
2,407,683 + CA264_10355 0.15 +0.2
2,407,713 - CA264_10355 0.17 -0.2
2,407,713 - CA264_10355 0.17 -0.4
2,407,800 + CA264_10355 0.22 -0.8
2,407,801 - CA264_10355 0.23 -0.0
2,407,855 - CA264_10355 0.26 +1.7
2,407,875 - CA264_10355 0.28 +0.9
2,407,918 + CA264_10355 0.30 +0.1
2,407,933 + CA264_10355 0.31 +0.4
2,407,934 - CA264_10355 0.32 -0.5
2,407,951 + CA264_10355 0.33 +0.6
2,408,011 + CA264_10355 0.37 -1.0
2,408,013 + CA264_10355 0.37 +0.2
2,408,014 - CA264_10355 0.37 +0.5
2,408,033 + CA264_10355 0.38 +0.5
2,408,054 + CA264_10355 0.40 -0.1
2,408,055 - CA264_10355 0.40 -0.1
2,408,055 - CA264_10355 0.40 -0.5
2,408,082 + CA264_10355 0.42 +0.9
2,408,091 + CA264_10355 0.42 +1.0
2,408,150 - CA264_10355 0.46 -0.5
2,408,164 - CA264_10355 0.47 +0.2
2,408,222 + CA264_10355 0.51 -0.4
2,408,296 - CA264_10355 0.56 -1.0
2,408,309 + CA264_10355 0.57 -0.2
2,408,310 - CA264_10355 0.57 +0.9
2,408,310 - CA264_10355 0.57 -0.2
2,408,330 + CA264_10355 0.58 -0.6
2,408,330 + CA264_10355 0.58 +0.1
2,408,331 - CA264_10355 0.58 +0.0
2,408,411 - CA264_10355 0.64 -0.8
2,408,414 - CA264_10355 0.64 -2.0
2,408,474 + CA264_10355 0.68 +0.4
2,408,508 + CA264_10355 0.70 -0.2
2,408,509 - CA264_10355 0.70 -0.6
2,408,518 + CA264_10355 0.71 -0.2
2,408,602 + CA264_10355 0.77 +0.5
2,408,603 - CA264_10355 0.77 +0.6
2,408,606 + CA264_10355 0.77 -0.3
2,408,606 + CA264_10355 0.77 -0.1
2,408,606 + CA264_10355 0.77 -0.6
2,408,607 - CA264_10355 0.77 -0.2
2,408,607 - CA264_10355 0.77 +0.5
2,408,614 + CA264_10355 0.77 -0.8
2,408,624 - CA264_10355 0.78 +0.1
2,408,671 + CA264_10355 0.81 -0.1
2,408,677 - CA264_10355 0.82 +0.3
2,408,712 + CA264_10355 0.84 -0.3
2,408,713 - CA264_10355 0.84 -0.1
2,408,735 + CA264_10355 0.86 -0.2
2,408,736 - CA264_10355 0.86 -0.3
2,408,807 - -1.1
2,408,941 - +0.4
2,408,951 - -0.8
2,409,225 + CA264_10360 0.19 -1.1
2,409,315 + CA264_10360 0.28 -3.1
2,409,315 + CA264_10360 0.28 -1.6
2,409,315 + CA264_10360 0.28 -2.8
2,409,327 + CA264_10360 0.29 -0.4
2,409,327 + CA264_10360 0.29 -0.5
2,409,427 + CA264_10360 0.39 -0.7
2,409,498 + CA264_10360 0.46 -1.2
2,409,498 + CA264_10360 0.46 -1.8
2,409,498 + CA264_10360 0.46 -0.2
2,409,505 + CA264_10360 0.47 -2.2
2,409,561 + CA264_10360 0.52 -1.4
2,409,645 + CA264_10360 0.61 -1.5
2,409,714 + CA264_10360 0.67 -0.2

Or see this region's nucleotide sequence