Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10275 and CA264_10280 are separated by 332 nucleotides CA264_10280 and CA264_10285 are separated by 93 nucleotides CA264_10285 and CA264_10290 are separated by 66 nucleotides
CA264_10275: CA264_10275 - transcriptional regulator, at 2,388,694 to 2,389,089
_10275
CA264_10280: CA264_10280 - hypothetical protein, at 2,389,422 to 2,389,739
_10280
CA264_10285: CA264_10285 - hypothetical protein, at 2,389,833 to 2,390,153
_10285
CA264_10290: CA264_10290 - hypothetical protein, at 2,390,220 to 2,391,650
_10290
Position (kb)
2389
2390
2391 Strain fitness (log2 ratio)
-1
0
1
2 at 2388.850 kb on - strand, within CA264_10275 at 2388.940 kb on + strand, within CA264_10275 at 2389.096 kb on - strand at 2389.140 kb on - strand at 2389.152 kb on + strand at 2389.152 kb on + strand at 2389.153 kb on - strand at 2389.183 kb on + strand at 2389.184 kb on - strand at 2389.185 kb on + strand at 2389.185 kb on + strand at 2389.186 kb on - strand at 2389.211 kb on + strand at 2389.212 kb on - strand at 2389.219 kb on + strand at 2389.220 kb on - strand at 2389.274 kb on - strand at 2389.345 kb on + strand at 2389.442 kb on + strand at 2389.495 kb on - strand, within CA264_10280 at 2389.495 kb on - strand, within CA264_10280 at 2389.715 kb on - strand at 2389.718 kb on - strand at 2389.718 kb on - strand at 2389.748 kb on + strand at 2389.749 kb on - strand at 2389.780 kb on + strand at 2389.780 kb on + strand at 2389.781 kb on - strand at 2389.781 kb on - strand at 2389.812 kb on - strand at 2389.812 kb on - strand at 2389.847 kb on + strand at 2389.848 kb on - strand at 2389.953 kb on + strand, within CA264_10285 at 2390.039 kb on + strand, within CA264_10285 at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.220 kb on - strand at 2390.220 kb on - strand at 2390.220 kb on - strand at 2390.277 kb on + strand at 2390.529 kb on + strand, within CA264_10290 at 2390.529 kb on + strand, within CA264_10290 at 2390.530 kb on - strand, within CA264_10290 at 2390.614 kb on + strand, within CA264_10290 at 2390.643 kb on - strand, within CA264_10290 at 2390.700 kb on + strand, within CA264_10290 at 2391.057 kb on + strand, within CA264_10290 at 2391.057 kb on + strand, within CA264_10290
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 2,388,850 - CA264_10275 0.39 -0.0 2,388,940 + CA264_10275 0.62 -0.2 2,389,096 - -0.1 2,389,140 - +0.3 2,389,152 + -1.2 2,389,152 + -0.5 2,389,153 - +0.1 2,389,183 + -0.8 2,389,184 - -0.1 2,389,185 + +2.4 2,389,185 + -0.1 2,389,186 - -0.5 2,389,211 + -0.8 2,389,212 - +0.8 2,389,219 + +0.8 2,389,220 - -0.5 2,389,274 - -0.7 2,389,345 + -0.1 2,389,442 + -0.3 2,389,495 - CA264_10280 0.23 -0.4 2,389,495 - CA264_10280 0.23 +0.4 2,389,715 - -1.2 2,389,718 - -0.7 2,389,718 - -0.5 2,389,748 + -0.7 2,389,749 - -0.8 2,389,780 + -0.8 2,389,780 + -0.1 2,389,781 - -0.5 2,389,781 - -0.1 2,389,812 - -0.1 2,389,812 - +0.6 2,389,847 + -0.2 2,389,848 - -0.1 2,389,953 + CA264_10285 0.37 -1.5 2,390,039 + CA264_10285 0.64 -1.6 2,390,219 + +0.4 2,390,219 + +0.1 2,390,219 + -0.3 2,390,219 + -0.7 2,390,219 + -0.1 2,390,220 - -0.5 2,390,220 - -0.5 2,390,220 - -1.4 2,390,277 + -0.2 2,390,529 + CA264_10290 0.22 -0.6 2,390,529 + CA264_10290 0.22 -0.5 2,390,530 - CA264_10290 0.22 +1.6 2,390,614 + CA264_10290 0.28 +2.1 2,390,643 - CA264_10290 0.30 +0.6 2,390,700 + CA264_10290 0.34 +0.1 2,391,057 + CA264_10290 0.58 -0.6 2,391,057 + CA264_10290 0.58 -0.3
Or see this region's nucleotide sequence