Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10180 and CA264_10185 overlap by 4 nucleotides CA264_10185 and CA264_10190 are separated by 889 nucleotides
CA264_10180: CA264_10180 - SOS mutagenesis and repair protein UmuC, at 2,366,052 to 2,367,320
_10180
CA264_10185: CA264_10185 - hypothetical protein, at 2,367,317 to 2,367,778
_10185
CA264_10190: CA264_10190 - hypothetical protein, at 2,368,668 to 2,369,003
_10190
Position (kb)
2367
2368 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2366.483 kb on + strand, within CA264_10180 at 2366.484 kb on - strand, within CA264_10180 at 2366.484 kb on - strand, within CA264_10180 at 2366.484 kb on - strand, within CA264_10180 at 2366.509 kb on + strand, within CA264_10180 at 2366.509 kb on + strand, within CA264_10180 at 2366.509 kb on + strand, within CA264_10180 at 2366.510 kb on - strand, within CA264_10180 at 2366.546 kb on - strand, within CA264_10180 at 2366.550 kb on - strand, within CA264_10180 at 2366.889 kb on - strand, within CA264_10180 at 2366.889 kb on - strand, within CA264_10180 at 2367.020 kb on - strand, within CA264_10180 at 2367.027 kb on + strand, within CA264_10180 at 2367.091 kb on + strand, within CA264_10180 at 2367.092 kb on - strand, within CA264_10180 at 2367.281 kb on - strand at 2367.281 kb on - strand at 2367.281 kb on - strand at 2367.281 kb on - strand at 2367.480 kb on - strand, within CA264_10185 at 2367.544 kb on + strand, within CA264_10185 at 2367.545 kb on - strand, within CA264_10185 at 2367.545 kb on - strand, within CA264_10185 at 2367.545 kb on - strand, within CA264_10185 at 2367.559 kb on + strand, within CA264_10185 at 2367.612 kb on + strand, within CA264_10185 at 2367.642 kb on + strand, within CA264_10185 at 2367.642 kb on + strand, within CA264_10185 at 2367.822 kb on - strand at 2367.953 kb on - strand at 2368.020 kb on + strand at 2368.035 kb on + strand at 2368.044 kb on - strand at 2368.045 kb on + strand at 2368.051 kb on - strand at 2368.071 kb on - strand at 2368.084 kb on + strand at 2368.095 kb on + strand at 2368.105 kb on + strand at 2368.106 kb on - strand at 2368.130 kb on - strand at 2368.148 kb on + strand at 2368.197 kb on - strand at 2368.224 kb on + strand at 2368.225 kb on - strand at 2368.236 kb on - strand at 2368.249 kb on + strand at 2368.249 kb on + strand at 2368.250 kb on - strand at 2368.250 kb on - strand at 2368.280 kb on + strand at 2368.280 kb on + strand at 2368.280 kb on + strand at 2368.281 kb on - strand at 2368.300 kb on - strand at 2368.325 kb on + strand at 2368.336 kb on - strand at 2368.340 kb on - strand at 2368.402 kb on + strand at 2368.402 kb on + strand at 2368.403 kb on - strand at 2368.403 kb on - strand at 2368.403 kb on - strand at 2368.410 kb on - strand at 2368.410 kb on - strand at 2368.493 kb on - strand at 2368.503 kb on - strand at 2368.505 kb on + strand at 2368.522 kb on + strand at 2368.523 kb on - strand at 2368.535 kb on - strand at 2368.545 kb on - strand at 2368.548 kb on - strand at 2368.559 kb on + strand at 2368.586 kb on + strand at 2368.587 kb on - strand at 2368.624 kb on + strand at 2368.706 kb on + strand, within CA264_10190 at 2368.738 kb on - strand, within CA264_10190 at 2368.753 kb on + strand, within CA264_10190 at 2368.756 kb on - strand, within CA264_10190 at 2368.756 kb on - strand, within CA264_10190
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 2,366,483 + CA264_10180 0.34 -0.7 2,366,484 - CA264_10180 0.34 +1.2 2,366,484 - CA264_10180 0.34 +0.1 2,366,484 - CA264_10180 0.34 -1.1 2,366,509 + CA264_10180 0.36 -0.3 2,366,509 + CA264_10180 0.36 +0.0 2,366,509 + CA264_10180 0.36 -1.1 2,366,510 - CA264_10180 0.36 +0.3 2,366,546 - CA264_10180 0.39 -0.3 2,366,550 - CA264_10180 0.39 +0.8 2,366,889 - CA264_10180 0.66 -0.4 2,366,889 - CA264_10180 0.66 -1.0 2,367,020 - CA264_10180 0.76 -0.1 2,367,027 + CA264_10180 0.77 -0.0 2,367,091 + CA264_10180 0.82 -0.5 2,367,092 - CA264_10180 0.82 +0.4 2,367,281 - -0.4 2,367,281 - +0.3 2,367,281 - -1.4 2,367,281 - +0.5 2,367,480 - CA264_10185 0.35 +0.3 2,367,544 + CA264_10185 0.49 -1.8 2,367,545 - CA264_10185 0.49 +0.1 2,367,545 - CA264_10185 0.49 -0.1 2,367,545 - CA264_10185 0.49 +2.0 2,367,559 + CA264_10185 0.52 +0.5 2,367,612 + CA264_10185 0.64 +0.1 2,367,642 + CA264_10185 0.70 -0.4 2,367,642 + CA264_10185 0.70 +1.4 2,367,822 - -0.7 2,367,953 - +0.8 2,368,020 + -0.3 2,368,035 + -0.0 2,368,044 - +0.1 2,368,045 + +0.1 2,368,051 - -0.3 2,368,071 - -0.1 2,368,084 + -1.0 2,368,095 + +0.1 2,368,105 + +0.4 2,368,106 - +0.0 2,368,130 - -0.5 2,368,148 + +0.1 2,368,197 - +0.9 2,368,224 + +0.7 2,368,225 - -0.1 2,368,236 - -0.7 2,368,249 + -0.3 2,368,249 + -0.1 2,368,250 - +0.0 2,368,250 - +0.1 2,368,280 + +0.5 2,368,280 + +0.4 2,368,280 + -1.2 2,368,281 - +0.1 2,368,300 - +0.5 2,368,325 + +0.1 2,368,336 - +0.2 2,368,340 - -0.3 2,368,402 + +0.3 2,368,402 + -1.2 2,368,403 - -0.1 2,368,403 - -0.1 2,368,403 - -0.2 2,368,410 - -1.5 2,368,410 - +0.8 2,368,493 - -1.9 2,368,503 - -0.1 2,368,505 + +0.1 2,368,522 + -0.3 2,368,523 - -1.2 2,368,535 - +0.5 2,368,545 - +1.2 2,368,548 - +0.4 2,368,559 + -0.7 2,368,586 + -0.7 2,368,587 - -0.7 2,368,624 + -0.1 2,368,706 + CA264_10190 0.11 +0.1 2,368,738 - CA264_10190 0.21 -0.9 2,368,753 + CA264_10190 0.25 -1.1 2,368,756 - CA264_10190 0.26 +2.0 2,368,756 - CA264_10190 0.26 +0.7
Or see this region's nucleotide sequence