Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10000 and CA264_10005 are separated by 268 nucleotides CA264_10005 and CA264_10010 are separated by 483 nucleotides
CA264_10000: CA264_10000 - DNA repair protein, at 2,325,869 to 2,326,336
_10000
CA264_10005: CA264_10005 - hypothetical protein, at 2,326,605 to 2,326,790
_10005
CA264_10010: CA264_10010 - hypothetical protein, at 2,327,274 to 2,327,855
_10010
Position (kb)
2326
2327 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2325.707 kb on + strand at 2325.736 kb on + strand at 2325.736 kb on + strand at 2325.737 kb on - strand at 2325.737 kb on - strand at 2325.737 kb on - strand at 2325.805 kb on - strand at 2325.805 kb on - strand at 2325.835 kb on + strand at 2325.852 kb on + strand at 2325.852 kb on + strand at 2325.980 kb on + strand, within CA264_10000 at 2326.079 kb on + strand, within CA264_10000 at 2326.130 kb on - strand, within CA264_10000 at 2326.147 kb on - strand, within CA264_10000 at 2326.175 kb on - strand, within CA264_10000 at 2326.307 kb on + strand at 2326.360 kb on - strand at 2326.360 kb on - strand at 2326.427 kb on - strand at 2326.431 kb on + strand at 2326.431 kb on + strand at 2326.432 kb on - strand at 2326.432 kb on - strand at 2326.432 kb on - strand at 2326.432 kb on - strand at 2326.440 kb on + strand at 2326.440 kb on + strand at 2326.441 kb on - strand at 2326.441 kb on - strand at 2326.441 kb on - strand at 2326.441 kb on - strand at 2326.474 kb on + strand at 2326.474 kb on + strand at 2326.475 kb on - strand at 2326.475 kb on - strand at 2326.475 kb on - strand at 2326.475 kb on - strand at 2326.497 kb on - strand at 2326.534 kb on - strand at 2326.534 kb on - strand at 2326.605 kb on - strand at 2326.605 kb on - strand at 2326.646 kb on + strand, within CA264_10005 at 2326.725 kb on + strand, within CA264_10005 at 2326.725 kb on + strand, within CA264_10005 at 2326.834 kb on + strand at 2326.916 kb on - strand at 2326.916 kb on - strand at 2326.920 kb on - strand at 2326.955 kb on + strand at 2326.955 kb on + strand at 2326.965 kb on + strand at 2326.966 kb on - strand at 2326.966 kb on - strand at 2326.980 kb on + strand at 2327.055 kb on - strand at 2327.055 kb on - strand at 2327.055 kb on - strand at 2327.058 kb on + strand at 2327.067 kb on - strand at 2327.085 kb on + strand at 2327.086 kb on - strand at 2327.086 kb on - strand at 2327.139 kb on + strand at 2327.142 kb on + strand at 2327.142 kb on + strand at 2327.143 kb on - strand at 2327.143 kb on - strand at 2327.151 kb on - strand at 2327.164 kb on + strand at 2327.165 kb on - strand at 2327.184 kb on - strand at 2327.204 kb on - strand at 2327.220 kb on - strand at 2327.230 kb on - strand at 2327.230 kb on - strand at 2327.230 kb on - strand at 2327.234 kb on + strand at 2327.254 kb on + strand at 2327.255 kb on - strand at 2327.287 kb on - strand at 2327.349 kb on - strand, within CA264_10010 at 2327.454 kb on - strand, within CA264_10010 at 2327.562 kb on + strand, within CA264_10010 at 2327.562 kb on + strand, within CA264_10010 at 2327.563 kb on - strand, within CA264_10010 at 2327.584 kb on - strand, within CA264_10010 at 2327.592 kb on + strand, within CA264_10010 at 2327.598 kb on + strand, within CA264_10010 at 2327.598 kb on + strand, within CA264_10010 at 2327.598 kb on + strand, within CA264_10010 at 2327.598 kb on + strand, within CA264_10010 at 2327.598 kb on + strand, within CA264_10010 at 2327.599 kb on - strand, within CA264_10010 at 2327.681 kb on + strand, within CA264_10010 at 2327.727 kb on + strand, within CA264_10010 at 2327.784 kb on + strand, within CA264_10010 at 2327.784 kb on + strand, within CA264_10010 at 2327.784 kb on + strand, within CA264_10010 at 2327.784 kb on + strand, within CA264_10010 at 2327.785 kb on - strand, within CA264_10010 at 2327.785 kb on - strand, within CA264_10010 at 2327.787 kb on - strand, within CA264_10010
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 2,325,707 + -0.2 2,325,736 + -1.2 2,325,736 + -0.1 2,325,737 - -0.4 2,325,737 - +0.2 2,325,737 - -1.2 2,325,805 - -1.8 2,325,805 - -0.3 2,325,835 + -2.1 2,325,852 + +0.7 2,325,852 + -1.1 2,325,980 + CA264_10000 0.24 +0.2 2,326,079 + CA264_10000 0.45 -0.7 2,326,130 - CA264_10000 0.56 -0.6 2,326,147 - CA264_10000 0.59 -0.0 2,326,175 - CA264_10000 0.65 -0.0 2,326,307 + -0.3 2,326,360 - -1.4 2,326,360 - +0.6 2,326,427 - -0.9 2,326,431 + +0.1 2,326,431 + -0.8 2,326,432 - -0.8 2,326,432 - -1.3 2,326,432 - +0.1 2,326,432 - -1.1 2,326,440 + -0.2 2,326,440 + +1.4 2,326,441 - -0.2 2,326,441 - -0.5 2,326,441 - +0.5 2,326,441 - +0.1 2,326,474 + -0.5 2,326,474 + -0.7 2,326,475 - +0.6 2,326,475 - -1.4 2,326,475 - -0.0 2,326,475 - +0.3 2,326,497 - -0.7 2,326,534 - +0.6 2,326,534 - -1.3 2,326,605 - -0.1 2,326,605 - +0.0 2,326,646 + CA264_10005 0.22 +0.5 2,326,725 + CA264_10005 0.65 +1.0 2,326,725 + CA264_10005 0.65 +1.4 2,326,834 + -0.3 2,326,916 - -1.8 2,326,916 - +0.1 2,326,920 - +0.2 2,326,955 + +0.8 2,326,955 + -0.1 2,326,965 + +0.4 2,326,966 - +0.4 2,326,966 - -0.9 2,326,980 + +0.2 2,327,055 - -0.7 2,327,055 - +0.6 2,327,055 - +0.0 2,327,058 + +0.4 2,327,067 - -0.3 2,327,085 + -0.3 2,327,086 - +1.1 2,327,086 - +1.1 2,327,139 + +0.7 2,327,142 + -1.1 2,327,142 + -0.2 2,327,143 - -0.2 2,327,143 - -0.5 2,327,151 - -0.3 2,327,164 + +0.3 2,327,165 - +0.1 2,327,184 - -0.9 2,327,204 - -0.3 2,327,220 - +0.0 2,327,230 - +1.6 2,327,230 - +0.7 2,327,230 - +0.4 2,327,234 + +0.5 2,327,254 + +0.0 2,327,255 - +0.0 2,327,287 - +0.9 2,327,349 - CA264_10010 0.13 -0.4 2,327,454 - CA264_10010 0.31 +0.0 2,327,562 + CA264_10010 0.49 -0.2 2,327,562 + CA264_10010 0.49 -0.5 2,327,563 - CA264_10010 0.50 +0.2 2,327,584 - CA264_10010 0.53 -0.8 2,327,592 + CA264_10010 0.55 -0.2 2,327,598 + CA264_10010 0.56 -0.2 2,327,598 + CA264_10010 0.56 -0.5 2,327,598 + CA264_10010 0.56 -0.4 2,327,598 + CA264_10010 0.56 -0.2 2,327,598 + CA264_10010 0.56 -0.4 2,327,599 - CA264_10010 0.56 +0.9 2,327,681 + CA264_10010 0.70 +0.8 2,327,727 + CA264_10010 0.78 -1.2 2,327,784 + CA264_10010 0.88 +0.3 2,327,784 + CA264_10010 0.88 +0.0 2,327,784 + CA264_10010 0.88 +1.9 2,327,784 + CA264_10010 0.88 +1.5 2,327,785 - CA264_10010 0.88 -0.8 2,327,785 - CA264_10010 0.88 -0.3 2,327,787 - CA264_10010 0.88 -0.0
Or see this region's nucleotide sequence