Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09410 and CA264_09415 are separated by 171 nucleotides CA264_09415 and CA264_09420 are separated by 501 nucleotides
CA264_09410: CA264_09410 - recombinase RecQ, at 2,198,274 to 2,200,187
_09410
CA264_09415: CA264_09415 - hypothetical protein, at 2,200,359 to 2,201,153
_09415
CA264_09420: CA264_09420 - maltose acetyltransferase, at 2,201,655 to 2,202,212
_09420
Position (kb)
2200
2201
2202 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2200.167 kb on + strand at 2200.167 kb on + strand at 2200.167 kb on + strand at 2200.203 kb on - strand at 2200.207 kb on + strand at 2200.294 kb on + strand at 2200.309 kb on - strand at 2200.309 kb on - strand at 2200.339 kb on + strand at 2200.345 kb on + strand at 2200.354 kb on + strand at 2200.458 kb on - strand, within CA264_09415 at 2200.515 kb on - strand, within CA264_09415 at 2200.544 kb on - strand, within CA264_09415 at 2200.682 kb on - strand, within CA264_09415 at 2200.703 kb on + strand, within CA264_09415 at 2200.726 kb on - strand, within CA264_09415 at 2200.757 kb on + strand, within CA264_09415 at 2200.781 kb on + strand, within CA264_09415 at 2200.807 kb on + strand, within CA264_09415 at 2200.807 kb on + strand, within CA264_09415 at 2200.954 kb on - strand, within CA264_09415 at 2200.999 kb on + strand, within CA264_09415 at 2200.999 kb on + strand, within CA264_09415 at 2200.999 kb on + strand, within CA264_09415 at 2201.013 kb on + strand, within CA264_09415 at 2201.015 kb on + strand, within CA264_09415 at 2201.091 kb on + strand at 2201.091 kb on + strand at 2201.091 kb on + strand at 2201.092 kb on - strand at 2201.139 kb on - strand at 2201.174 kb on - strand at 2201.174 kb on - strand at 2201.179 kb on - strand at 2201.182 kb on + strand at 2201.183 kb on - strand at 2201.183 kb on - strand at 2201.185 kb on - strand at 2201.185 kb on - strand at 2201.258 kb on + strand at 2201.282 kb on + strand at 2201.338 kb on + strand at 2201.341 kb on - strand at 2201.419 kb on + strand at 2201.419 kb on + strand at 2201.420 kb on - strand at 2201.549 kb on + strand at 2201.576 kb on - strand at 2201.616 kb on - strand at 2201.643 kb on + strand at 2201.649 kb on + strand at 2201.693 kb on - strand at 2201.695 kb on - strand at 2201.695 kb on - strand at 2201.695 kb on - strand at 2201.695 kb on - strand at 2201.750 kb on - strand, within CA264_09420 at 2201.800 kb on + strand, within CA264_09420 at 2201.812 kb on + strand, within CA264_09420 at 2201.812 kb on + strand, within CA264_09420 at 2201.813 kb on - strand, within CA264_09420 at 2201.842 kb on + strand, within CA264_09420 at 2201.857 kb on - strand, within CA264_09420 at 2201.857 kb on - strand, within CA264_09420 at 2201.865 kb on + strand, within CA264_09420 at 2201.909 kb on + strand, within CA264_09420 at 2201.982 kb on + strand, within CA264_09420 at 2201.982 kb on + strand, within CA264_09420 at 2202.083 kb on - strand, within CA264_09420 at 2202.100 kb on + strand, within CA264_09420 at 2202.125 kb on - strand, within CA264_09420
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 2,200,167 + +1.7 2,200,167 + +0.1 2,200,167 + -0.3 2,200,203 - +0.7 2,200,207 + -0.2 2,200,294 + +0.3 2,200,309 - -0.8 2,200,309 - +2.4 2,200,339 + -0.4 2,200,345 + -2.7 2,200,354 + -0.3 2,200,458 - CA264_09415 0.12 -0.3 2,200,515 - CA264_09415 0.20 +0.1 2,200,544 - CA264_09415 0.23 -1.1 2,200,682 - CA264_09415 0.41 -0.2 2,200,703 + CA264_09415 0.43 +0.4 2,200,726 - CA264_09415 0.46 +0.3 2,200,757 + CA264_09415 0.50 -0.1 2,200,781 + CA264_09415 0.53 +0.1 2,200,807 + CA264_09415 0.56 +1.2 2,200,807 + CA264_09415 0.56 +0.5 2,200,954 - CA264_09415 0.75 -0.9 2,200,999 + CA264_09415 0.81 +0.1 2,200,999 + CA264_09415 0.81 -0.2 2,200,999 + CA264_09415 0.81 -0.1 2,201,013 + CA264_09415 0.82 +0.2 2,201,015 + CA264_09415 0.83 +0.1 2,201,091 + -0.1 2,201,091 + -0.4 2,201,091 + -0.7 2,201,092 - -0.4 2,201,139 - +0.4 2,201,174 - -0.0 2,201,174 - -0.9 2,201,179 - +0.2 2,201,182 + +0.1 2,201,183 - +0.2 2,201,183 - -0.3 2,201,185 - -0.1 2,201,185 - -1.1 2,201,258 + +0.2 2,201,282 + -0.5 2,201,338 + -0.7 2,201,341 - -0.1 2,201,419 + +1.1 2,201,419 + -0.3 2,201,420 - +1.0 2,201,549 + -0.1 2,201,576 - -0.5 2,201,616 - -0.4 2,201,643 + +1.1 2,201,649 + -0.8 2,201,693 - -0.6 2,201,695 - +0.0 2,201,695 - -1.7 2,201,695 - -0.6 2,201,695 - +0.6 2,201,750 - CA264_09420 0.17 -0.6 2,201,800 + CA264_09420 0.26 +0.2 2,201,812 + CA264_09420 0.28 +0.1 2,201,812 + CA264_09420 0.28 +0.1 2,201,813 - CA264_09420 0.28 +0.6 2,201,842 + CA264_09420 0.34 -1.2 2,201,857 - CA264_09420 0.36 +0.2 2,201,857 - CA264_09420 0.36 +0.7 2,201,865 + CA264_09420 0.38 +0.5 2,201,909 + CA264_09420 0.46 -0.5 2,201,982 + CA264_09420 0.59 -0.0 2,201,982 + CA264_09420 0.59 +1.6 2,202,083 - CA264_09420 0.77 +0.6 2,202,100 + CA264_09420 0.80 +1.3 2,202,125 - CA264_09420 0.84 -0.2
Or see this region's nucleotide sequence