Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05630 and CA264_05635 are separated by 5 nucleotides CA264_05635 and CA264_05640 are separated by 5 nucleotides
CA264_05630: CA264_05630 - glycerol-3-phosphate dehydrogenase, at 1,307,906 to 1,308,895
_05630
CA264_05635: CA264_05635 - efflux transporter periplasmic adaptor subunit, at 1,308,901 to 1,310,289
_05635
CA264_05640: CA264_05640 - transporter, at 1,310,295 to 1,311,761
_05640
Position (kb)
1308
1309
1310
1311 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1307.962 kb on - strand at 1307.966 kb on + strand at 1307.967 kb on - strand at 1307.973 kb on + strand at 1307.976 kb on - strand at 1308.042 kb on + strand, within CA264_05630 at 1308.145 kb on - strand, within CA264_05630 at 1308.155 kb on + strand, within CA264_05630 at 1308.336 kb on + strand, within CA264_05630 at 1308.336 kb on + strand, within CA264_05630 at 1308.337 kb on - strand, within CA264_05630 at 1308.699 kb on - strand, within CA264_05630 at 1308.699 kb on - strand, within CA264_05630 at 1308.699 kb on - strand, within CA264_05630 at 1308.716 kb on + strand, within CA264_05630 at 1308.717 kb on - strand, within CA264_05630 at 1309.018 kb on + strand at 1309.085 kb on - strand, within CA264_05635 at 1309.261 kb on + strand, within CA264_05635 at 1309.261 kb on + strand, within CA264_05635 at 1309.267 kb on + strand, within CA264_05635 at 1309.267 kb on + strand, within CA264_05635 at 1309.268 kb on - strand, within CA264_05635 at 1309.268 kb on - strand, within CA264_05635 at 1309.270 kb on + strand, within CA264_05635 at 1309.271 kb on - strand, within CA264_05635 at 1309.300 kb on + strand, within CA264_05635 at 1309.385 kb on - strand, within CA264_05635 at 1309.481 kb on + strand, within CA264_05635 at 1309.614 kb on + strand, within CA264_05635 at 1309.614 kb on + strand, within CA264_05635 at 1309.618 kb on + strand, within CA264_05635 at 1309.676 kb on + strand, within CA264_05635 at 1309.677 kb on - strand, within CA264_05635 at 1309.677 kb on - strand, within CA264_05635 at 1309.837 kb on + strand, within CA264_05635 at 1309.981 kb on - strand, within CA264_05635 at 1309.981 kb on - strand, within CA264_05635 at 1310.092 kb on + strand, within CA264_05635 at 1310.128 kb on + strand, within CA264_05635 at 1310.167 kb on + strand at 1310.167 kb on + strand at 1310.194 kb on + strand at 1310.245 kb on + strand at 1310.246 kb on - strand at 1310.259 kb on + strand at 1310.265 kb on + strand at 1310.266 kb on - strand at 1310.290 kb on - strand at 1310.290 kb on - strand at 1310.350 kb on + strand at 1310.350 kb on + strand at 1310.356 kb on + strand at 1310.506 kb on + strand, within CA264_05640 at 1310.507 kb on - strand, within CA264_05640 at 1310.547 kb on + strand, within CA264_05640 at 1310.547 kb on + strand, within CA264_05640 at 1310.548 kb on - strand, within CA264_05640 at 1310.548 kb on - strand, within CA264_05640 at 1310.548 kb on - strand, within CA264_05640 at 1310.560 kb on - strand, within CA264_05640 at 1310.689 kb on + strand, within CA264_05640 at 1310.752 kb on + strand, within CA264_05640 at 1310.753 kb on - strand, within CA264_05640 at 1310.809 kb on + strand, within CA264_05640 at 1310.857 kb on + strand, within CA264_05640 at 1310.897 kb on - strand, within CA264_05640 at 1310.941 kb on - strand, within CA264_05640 at 1310.960 kb on + strand, within CA264_05640 at 1310.960 kb on + strand, within CA264_05640 at 1310.979 kb on + strand, within CA264_05640 at 1310.992 kb on + strand, within CA264_05640 at 1310.992 kb on + strand, within CA264_05640 at 1310.992 kb on + strand, within CA264_05640 at 1310.993 kb on - strand, within CA264_05640 at 1310.993 kb on - strand, within CA264_05640 at 1311.052 kb on - strand, within CA264_05640 at 1311.231 kb on + strand, within CA264_05640
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 1,307,962 - -0.6 1,307,966 + +0.2 1,307,967 - +0.8 1,307,973 + -1.4 1,307,976 - -0.4 1,308,042 + CA264_05630 0.14 +0.9 1,308,145 - CA264_05630 0.24 +1.5 1,308,155 + CA264_05630 0.25 +1.0 1,308,336 + CA264_05630 0.43 +0.0 1,308,336 + CA264_05630 0.43 -0.2 1,308,337 - CA264_05630 0.44 +1.8 1,308,699 - CA264_05630 0.80 +0.0 1,308,699 - CA264_05630 0.80 +0.3 1,308,699 - CA264_05630 0.80 -0.1 1,308,716 + CA264_05630 0.82 -0.2 1,308,717 - CA264_05630 0.82 -0.4 1,309,018 + -1.0 1,309,085 - CA264_05635 0.13 +0.0 1,309,261 + CA264_05635 0.26 -1.1 1,309,261 + CA264_05635 0.26 +0.1 1,309,267 + CA264_05635 0.26 -1.7 1,309,267 + CA264_05635 0.26 -1.4 1,309,268 - CA264_05635 0.26 +0.5 1,309,268 - CA264_05635 0.26 -0.6 1,309,270 + CA264_05635 0.27 +0.0 1,309,271 - CA264_05635 0.27 -0.5 1,309,300 + CA264_05635 0.29 -0.3 1,309,385 - CA264_05635 0.35 -1.4 1,309,481 + CA264_05635 0.42 +0.6 1,309,614 + CA264_05635 0.51 +0.0 1,309,614 + CA264_05635 0.51 -0.1 1,309,618 + CA264_05635 0.52 -0.3 1,309,676 + CA264_05635 0.56 -0.7 1,309,677 - CA264_05635 0.56 -0.3 1,309,677 - CA264_05635 0.56 -0.2 1,309,837 + CA264_05635 0.67 -0.2 1,309,981 - CA264_05635 0.78 -0.6 1,309,981 - CA264_05635 0.78 -2.0 1,310,092 + CA264_05635 0.86 -0.8 1,310,128 + CA264_05635 0.88 -0.2 1,310,167 + +1.0 1,310,167 + +0.3 1,310,194 + -0.4 1,310,245 + -0.5 1,310,246 - +1.9 1,310,259 + +0.1 1,310,265 + -1.2 1,310,266 - -0.2 1,310,290 - -0.9 1,310,290 - -0.2 1,310,350 + -0.6 1,310,350 + -0.7 1,310,356 + +0.4 1,310,506 + CA264_05640 0.14 +0.4 1,310,507 - CA264_05640 0.14 -0.1 1,310,547 + CA264_05640 0.17 -0.2 1,310,547 + CA264_05640 0.17 -0.1 1,310,548 - CA264_05640 0.17 -0.4 1,310,548 - CA264_05640 0.17 +0.5 1,310,548 - CA264_05640 0.17 +0.8 1,310,560 - CA264_05640 0.18 +0.1 1,310,689 + CA264_05640 0.27 -1.1 1,310,752 + CA264_05640 0.31 -0.2 1,310,753 - CA264_05640 0.31 -0.7 1,310,809 + CA264_05640 0.35 -0.1 1,310,857 + CA264_05640 0.38 -1.0 1,310,897 - CA264_05640 0.41 -0.4 1,310,941 - CA264_05640 0.44 +0.1 1,310,960 + CA264_05640 0.45 +0.2 1,310,960 + CA264_05640 0.45 -0.3 1,310,979 + CA264_05640 0.47 -0.8 1,310,992 + CA264_05640 0.48 -0.1 1,310,992 + CA264_05640 0.48 -0.5 1,310,992 + CA264_05640 0.48 -0.1 1,310,993 - CA264_05640 0.48 +0.3 1,310,993 - CA264_05640 0.48 -0.4 1,311,052 - CA264_05640 0.52 -0.1 1,311,231 + CA264_05640 0.64 +0.3
Or see this region's nucleotide sequence