Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05055 and CA264_05060 are separated by 1 nucleotides CA264_05060 and CA264_05065 are separated by 91 nucleotides CA264_05065 and CA264_05070 are separated by 34 nucleotides CA264_05070 and CA264_05075 are separated by 20 nucleotides
CA264_05055: CA264_05055 - anthranilate synthase component I, at 1,171,186 to 1,172,598
_05055
CA264_05060: CA264_05060 - glutamine amidotransferase, at 1,172,600 to 1,173,163
_05060
CA264_05065: CA264_05065 - anthranilate phosphoribosyltransferase, at 1,173,255 to 1,174,262
_05065
CA264_05070: CA264_05070 - indole-3-glycerol phosphate synthase, at 1,174,297 to 1,175,115
_05070
CA264_05075: CA264_05075 - hypothetical protein, at 1,175,136 to 1,175,759
_05075
Position (kb)
1173
1174
1175 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1172.477 kb on + strand at 1172.478 kb on - strand at 1172.478 kb on - strand at 1172.479 kb on + strand at 1172.480 kb on - strand at 1172.625 kb on - strand at 1172.626 kb on - strand at 1172.642 kb on - strand at 1172.679 kb on + strand, within CA264_05060 at 1172.759 kb on - strand, within CA264_05060 at 1172.802 kb on - strand, within CA264_05060 at 1172.835 kb on + strand, within CA264_05060 at 1172.859 kb on + strand, within CA264_05060 at 1172.860 kb on - strand, within CA264_05060 at 1173.050 kb on + strand, within CA264_05060 at 1173.053 kb on - strand, within CA264_05060 at 1173.162 kb on - strand at 1173.201 kb on + strand at 1173.234 kb on + strand at 1173.240 kb on + strand at 1173.241 kb on - strand at 1173.277 kb on + strand at 1173.468 kb on + strand, within CA264_05065 at 1173.469 kb on - strand, within CA264_05065 at 1173.471 kb on - strand, within CA264_05065 at 1173.513 kb on - strand, within CA264_05065 at 1173.524 kb on - strand, within CA264_05065 at 1173.524 kb on - strand, within CA264_05065 at 1173.528 kb on - strand, within CA264_05065 at 1173.528 kb on - strand, within CA264_05065 at 1173.532 kb on + strand, within CA264_05065 at 1173.563 kb on - strand, within CA264_05065 at 1173.585 kb on + strand, within CA264_05065 at 1173.675 kb on - strand, within CA264_05065 at 1173.675 kb on - strand, within CA264_05065 at 1173.677 kb on - strand, within CA264_05065 at 1173.677 kb on - strand, within CA264_05065 at 1173.684 kb on + strand, within CA264_05065 at 1173.684 kb on + strand, within CA264_05065 at 1173.685 kb on - strand, within CA264_05065 at 1173.685 kb on - strand, within CA264_05065 at 1173.687 kb on - strand, within CA264_05065 at 1173.687 kb on - strand, within CA264_05065 at 1173.690 kb on - strand, within CA264_05065 at 1173.690 kb on - strand, within CA264_05065 at 1173.859 kb on - strand, within CA264_05065 at 1173.859 kb on - strand, within CA264_05065 at 1173.859 kb on - strand, within CA264_05065 at 1173.859 kb on - strand, within CA264_05065 at 1173.870 kb on + strand, within CA264_05065 at 1173.893 kb on + strand, within CA264_05065 at 1173.897 kb on - strand, within CA264_05065 at 1173.898 kb on + strand, within CA264_05065 at 1173.899 kb on - strand, within CA264_05065 at 1173.899 kb on - strand, within CA264_05065 at 1173.905 kb on + strand, within CA264_05065 at 1173.906 kb on - strand, within CA264_05065 at 1173.953 kb on - strand, within CA264_05065 at 1174.026 kb on - strand, within CA264_05065 at 1174.176 kb on - strand at 1174.213 kb on - strand at 1174.267 kb on + strand at 1174.330 kb on + strand at 1174.388 kb on + strand, within CA264_05070 at 1174.408 kb on - strand, within CA264_05070 at 1174.408 kb on - strand, within CA264_05070 at 1174.452 kb on + strand, within CA264_05070 at 1174.482 kb on + strand, within CA264_05070 at 1174.483 kb on - strand, within CA264_05070 at 1174.494 kb on + strand, within CA264_05070 at 1174.502 kb on - strand, within CA264_05070 at 1174.502 kb on - strand, within CA264_05070 at 1174.531 kb on + strand, within CA264_05070 at 1174.579 kb on + strand, within CA264_05070 at 1174.617 kb on + strand, within CA264_05070 at 1174.618 kb on - strand, within CA264_05070 at 1174.618 kb on - strand, within CA264_05070 at 1174.618 kb on - strand, within CA264_05070 at 1174.618 kb on - strand, within CA264_05070 at 1174.621 kb on + strand, within CA264_05070 at 1174.627 kb on + strand, within CA264_05070 at 1174.628 kb on - strand, within CA264_05070 at 1174.653 kb on + strand, within CA264_05070 at 1174.658 kb on + strand, within CA264_05070 at 1174.659 kb on - strand, within CA264_05070 at 1174.673 kb on + strand, within CA264_05070 at 1174.676 kb on + strand, within CA264_05070 at 1174.677 kb on - strand, within CA264_05070 at 1174.677 kb on - strand, within CA264_05070 at 1174.706 kb on + strand, within CA264_05070 at 1174.707 kb on - strand, within CA264_05070 at 1174.707 kb on - strand, within CA264_05070 at 1174.713 kb on - strand, within CA264_05070 at 1174.779 kb on - strand, within CA264_05070 at 1174.844 kb on + strand, within CA264_05070 at 1174.880 kb on + strand, within CA264_05070 at 1174.900 kb on + strand, within CA264_05070 at 1175.026 kb on - strand, within CA264_05070 at 1175.129 kb on + strand at 1175.205 kb on + strand, within CA264_05075 at 1175.206 kb on - strand, within CA264_05075 at 1175.216 kb on + strand, within CA264_05075 at 1175.223 kb on + strand, within CA264_05075 at 1175.224 kb on - strand, within CA264_05075 at 1175.255 kb on + strand, within CA264_05075 at 1175.256 kb on - strand, within CA264_05075
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 1,172,477 + -0.5 1,172,478 - -0.7 1,172,478 - -1.1 1,172,479 + +1.0 1,172,480 - +1.4 1,172,625 - -0.3 1,172,626 - +1.1 1,172,642 - -1.1 1,172,679 + CA264_05060 0.14 -0.7 1,172,759 - CA264_05060 0.28 -0.4 1,172,802 - CA264_05060 0.36 -0.8 1,172,835 + CA264_05060 0.42 +0.3 1,172,859 + CA264_05060 0.46 -1.8 1,172,860 - CA264_05060 0.46 +0.5 1,173,050 + CA264_05060 0.80 +0.3 1,173,053 - CA264_05060 0.80 -0.1 1,173,162 - -1.1 1,173,201 + -0.1 1,173,234 + -0.3 1,173,240 + -1.1 1,173,241 - +0.3 1,173,277 + +0.0 1,173,468 + CA264_05065 0.21 -0.3 1,173,469 - CA264_05065 0.21 -0.8 1,173,471 - CA264_05065 0.21 -0.8 1,173,513 - CA264_05065 0.26 +0.9 1,173,524 - CA264_05065 0.27 -0.4 1,173,524 - CA264_05065 0.27 +0.4 1,173,528 - CA264_05065 0.27 -0.2 1,173,528 - CA264_05065 0.27 +1.0 1,173,532 + CA264_05065 0.27 -1.4 1,173,563 - CA264_05065 0.31 -2.5 1,173,585 + CA264_05065 0.33 -0.4 1,173,675 - CA264_05065 0.42 +0.8 1,173,675 - CA264_05065 0.42 -0.1 1,173,677 - CA264_05065 0.42 -0.6 1,173,677 - CA264_05065 0.42 +0.0 1,173,684 + CA264_05065 0.43 -0.7 1,173,684 + CA264_05065 0.43 -0.3 1,173,685 - CA264_05065 0.43 -0.5 1,173,685 - CA264_05065 0.43 +0.1 1,173,687 - CA264_05065 0.43 -0.6 1,173,687 - CA264_05065 0.43 +0.6 1,173,690 - CA264_05065 0.43 +0.0 1,173,690 - CA264_05065 0.43 +1.4 1,173,859 - CA264_05065 0.60 -0.2 1,173,859 - CA264_05065 0.60 -0.6 1,173,859 - CA264_05065 0.60 -0.2 1,173,859 - CA264_05065 0.60 +0.5 1,173,870 + CA264_05065 0.61 +0.1 1,173,893 + CA264_05065 0.63 +0.2 1,173,897 - CA264_05065 0.64 -0.4 1,173,898 + CA264_05065 0.64 +0.3 1,173,899 - CA264_05065 0.64 -1.1 1,173,899 - CA264_05065 0.64 +0.1 1,173,905 + CA264_05065 0.64 -1.4 1,173,906 - CA264_05065 0.65 -0.9 1,173,953 - CA264_05065 0.69 +0.1 1,174,026 - CA264_05065 0.76 -0.5 1,174,176 - +1.4 1,174,213 - +0.8 1,174,267 + +0.2 1,174,330 + -0.7 1,174,388 + CA264_05070 0.11 -0.6 1,174,408 - CA264_05070 0.14 -1.2 1,174,408 - CA264_05070 0.14 +1.4 1,174,452 + CA264_05070 0.19 -0.2 1,174,482 + CA264_05070 0.23 -1.4 1,174,483 - CA264_05070 0.23 -1.0 1,174,494 + CA264_05070 0.24 -2.4 1,174,502 - CA264_05070 0.25 -1.4 1,174,502 - CA264_05070 0.25 -1.0 1,174,531 + CA264_05070 0.29 -0.6 1,174,579 + CA264_05070 0.34 -0.7 1,174,617 + CA264_05070 0.39 -0.3 1,174,618 - CA264_05070 0.39 -2.1 1,174,618 - CA264_05070 0.39 -0.7 1,174,618 - CA264_05070 0.39 -3.3 1,174,618 - CA264_05070 0.39 -1.9 1,174,621 + CA264_05070 0.40 -1.7 1,174,627 + CA264_05070 0.40 -0.5 1,174,628 - CA264_05070 0.40 -0.4 1,174,653 + CA264_05070 0.43 -0.4 1,174,658 + CA264_05070 0.44 -1.6 1,174,659 - CA264_05070 0.44 -1.2 1,174,673 + CA264_05070 0.46 -2.0 1,174,676 + CA264_05070 0.46 -0.4 1,174,677 - CA264_05070 0.46 -0.3 1,174,677 - CA264_05070 0.46 -1.4 1,174,706 + CA264_05070 0.50 +0.5 1,174,707 - CA264_05070 0.50 +1.0 1,174,707 - CA264_05070 0.50 -1.4 1,174,713 - CA264_05070 0.51 -0.6 1,174,779 - CA264_05070 0.59 -0.7 1,174,844 + CA264_05070 0.67 -0.3 1,174,880 + CA264_05070 0.71 -3.2 1,174,900 + CA264_05070 0.74 -1.6 1,175,026 - CA264_05070 0.89 -1.4 1,175,129 + +1.6 1,175,205 + CA264_05075 0.11 -0.3 1,175,206 - CA264_05075 0.11 -0.3 1,175,216 + CA264_05075 0.13 -0.7 1,175,223 + CA264_05075 0.14 -1.0 1,175,224 - CA264_05075 0.14 -3.1 1,175,255 + CA264_05075 0.19 -0.4 1,175,256 - CA264_05075 0.19 -0.0
Or see this region's nucleotide sequence