Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04325 and CA264_04330 are separated by 12 nucleotides CA264_04330 and CA264_04335 are separated by 91 nucleotides CA264_04335 and CA264_04340 are separated by 138 nucleotides
CA264_04325: CA264_04325 - amidohydrolase, at 1,000,386 to 1,002,047
_04325
CA264_04330: CA264_04330 - AMP nucleosidase, at 1,002,060 to 1,002,833
_04330
CA264_04335: CA264_04335 - restriction endonuclease subunit R, at 1,002,925 to 1,003,371
_04335
CA264_04340: CA264_04340 - hypothetical protein, at 1,003,510 to 1,005,384
_04340
Position (kb)
1002
1003 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1001.125 kb on + strand, within CA264_04325 at 1001.125 kb on + strand, within CA264_04325 at 1001.182 kb on + strand, within CA264_04325 at 1001.271 kb on + strand, within CA264_04325 at 1001.276 kb on + strand, within CA264_04325 at 1001.283 kb on - strand, within CA264_04325 at 1001.309 kb on + strand, within CA264_04325 at 1001.310 kb on - strand, within CA264_04325 at 1001.310 kb on - strand, within CA264_04325 at 1001.547 kb on + strand, within CA264_04325 at 1001.548 kb on - strand, within CA264_04325 at 1001.548 kb on - strand, within CA264_04325 at 1001.548 kb on - strand, within CA264_04325 at 1001.548 kb on - strand, within CA264_04325 at 1001.652 kb on - strand, within CA264_04325 at 1001.691 kb on + strand, within CA264_04325 at 1001.692 kb on - strand, within CA264_04325 at 1001.753 kb on - strand, within CA264_04325 at 1001.826 kb on - strand, within CA264_04325 at 1001.827 kb on + strand, within CA264_04325 at 1001.827 kb on + strand, within CA264_04325 at 1001.827 kb on + strand, within CA264_04325 at 1001.866 kb on - strand, within CA264_04325 at 1001.910 kb on - strand at 1001.938 kb on + strand at 1002.033 kb on - strand at 1002.148 kb on + strand, within CA264_04330 at 1002.365 kb on - strand, within CA264_04330 at 1002.699 kb on + strand, within CA264_04330 at 1002.731 kb on - strand, within CA264_04330 at 1002.843 kb on - strand at 1002.998 kb on + strand, within CA264_04335 at 1003.055 kb on + strand, within CA264_04335 at 1003.055 kb on + strand, within CA264_04335 at 1003.056 kb on - strand, within CA264_04335 at 1003.056 kb on - strand, within CA264_04335 at 1003.056 kb on - strand, within CA264_04335 at 1003.121 kb on - strand, within CA264_04335 at 1003.157 kb on - strand, within CA264_04335 at 1003.209 kb on - strand, within CA264_04335 at 1003.213 kb on - strand, within CA264_04335 at 1003.247 kb on - strand, within CA264_04335 at 1003.271 kb on - strand, within CA264_04335 at 1003.271 kb on - strand, within CA264_04335 at 1003.333 kb on + strand at 1003.360 kb on + strand at 1003.361 kb on - strand at 1003.472 kb on + strand at 1003.472 kb on + strand at 1003.473 kb on - strand at 1003.511 kb on + strand at 1003.512 kb on - strand at 1003.512 kb on - strand at 1003.526 kb on + strand at 1003.560 kb on - strand at 1003.565 kb on - strand at 1003.632 kb on + strand at 1003.694 kb on + strand at 1003.716 kb on + strand, within CA264_04340 at 1003.790 kb on + strand, within CA264_04340
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 1,001,125 + CA264_04325 0.44 +0.1 1,001,125 + CA264_04325 0.44 -0.0 1,001,182 + CA264_04325 0.48 +0.1 1,001,271 + CA264_04325 0.53 -1.4 1,001,276 + CA264_04325 0.54 -1.1 1,001,283 - CA264_04325 0.54 -1.1 1,001,309 + CA264_04325 0.56 +0.1 1,001,310 - CA264_04325 0.56 +0.4 1,001,310 - CA264_04325 0.56 -0.4 1,001,547 + CA264_04325 0.70 -1.9 1,001,548 - CA264_04325 0.70 -0.3 1,001,548 - CA264_04325 0.70 -0.7 1,001,548 - CA264_04325 0.70 -0.0 1,001,548 - CA264_04325 0.70 +0.1 1,001,652 - CA264_04325 0.76 -0.1 1,001,691 + CA264_04325 0.79 -0.4 1,001,692 - CA264_04325 0.79 +1.1 1,001,753 - CA264_04325 0.82 -0.7 1,001,826 - CA264_04325 0.87 -0.5 1,001,827 + CA264_04325 0.87 -2.1 1,001,827 + CA264_04325 0.87 -3.3 1,001,827 + CA264_04325 0.87 -1.2 1,001,866 - CA264_04325 0.89 -0.1 1,001,910 - -0.6 1,001,938 + -0.9 1,002,033 - +0.1 1,002,148 + CA264_04330 0.11 -3.2 1,002,365 - CA264_04330 0.39 -2.8 1,002,699 + CA264_04330 0.83 -1.6 1,002,731 - CA264_04330 0.87 -4.5 1,002,843 - -2.0 1,002,998 + CA264_04335 0.16 -0.3 1,003,055 + CA264_04335 0.29 +0.5 1,003,055 + CA264_04335 0.29 +0.1 1,003,056 - CA264_04335 0.29 -0.4 1,003,056 - CA264_04335 0.29 -0.2 1,003,056 - CA264_04335 0.29 -1.6 1,003,121 - CA264_04335 0.44 +0.4 1,003,157 - CA264_04335 0.52 -1.4 1,003,209 - CA264_04335 0.64 -0.7 1,003,213 - CA264_04335 0.64 -0.0 1,003,247 - CA264_04335 0.72 -0.3 1,003,271 - CA264_04335 0.77 -1.1 1,003,271 - CA264_04335 0.77 +0.0 1,003,333 + +0.6 1,003,360 + +0.0 1,003,361 - -0.5 1,003,472 + -1.2 1,003,472 + -0.3 1,003,473 - -1.4 1,003,511 + +0.0 1,003,512 - +0.4 1,003,512 - -0.2 1,003,526 + -1.2 1,003,560 - -0.0 1,003,565 - -0.4 1,003,632 + -0.3 1,003,694 + +0.1 1,003,716 + CA264_04340 0.11 +0.6 1,003,790 + CA264_04340 0.15 -0.4
Or see this region's nucleotide sequence