Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03145

Experiment: m.b. Cobalt chloride 0.05 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03140 and CA264_03145 are separated by 89 nucleotidesCA264_03145 and CA264_03150 are separated by 328 nucleotides CA264_03140: CA264_03140 - hypothetical protein, at 732,954 to 733,835 _03140 CA264_03145: CA264_03145 - cellulose synthase, at 733,925 to 735,706 _03145 CA264_03150: CA264_03150 - hypothetical protein, at 736,035 to 737,237 _03150 Position (kb) 733 734 735 736Strain fitness (log2 ratio) -2 -1 0 1 2at 732.943 kb on + strandat 732.943 kb on + strandat 732.998 kb on - strandat 732.998 kb on - strandat 733.001 kb on + strandat 733.063 kb on + strand, within CA264_03140at 733.064 kb on - strand, within CA264_03140at 733.090 kb on + strand, within CA264_03140at 733.109 kb on - strand, within CA264_03140at 733.109 kb on - strand, within CA264_03140at 733.121 kb on + strand, within CA264_03140at 733.162 kb on + strand, within CA264_03140at 733.163 kb on - strand, within CA264_03140at 733.184 kb on - strand, within CA264_03140at 733.261 kb on + strand, within CA264_03140at 733.262 kb on - strand, within CA264_03140at 733.427 kb on + strand, within CA264_03140at 733.430 kb on - strand, within CA264_03140at 733.585 kb on + strand, within CA264_03140at 733.612 kb on + strand, within CA264_03140at 733.612 kb on + strand, within CA264_03140at 733.613 kb on - strand, within CA264_03140at 733.613 kb on - strand, within CA264_03140at 733.613 kb on - strand, within CA264_03140at 733.614 kb on + strand, within CA264_03140at 733.614 kb on + strand, within CA264_03140at 733.614 kb on + strand, within CA264_03140at 733.614 kb on + strand, within CA264_03140at 733.614 kb on + strand, within CA264_03140at 733.614 kb on + strand, within CA264_03140at 733.615 kb on - strand, within CA264_03140at 733.615 kb on - strand, within CA264_03140at 733.615 kb on - strand, within CA264_03140at 733.615 kb on - strand, within CA264_03140at 733.616 kb on + strand, within CA264_03140at 733.617 kb on - strand, within CA264_03140at 733.721 kb on - strand, within CA264_03140at 733.721 kb on - strand, within CA264_03140at 733.735 kb on + strand, within CA264_03140at 733.822 kb on + strandat 733.823 kb on - strandat 733.872 kb on + strandat 733.880 kb on + strandat 734.007 kb on - strandat 734.007 kb on - strandat 734.095 kb on - strandat 734.225 kb on + strand, within CA264_03145at 734.228 kb on + strand, within CA264_03145at 734.229 kb on - strand, within CA264_03145at 734.229 kb on - strand, within CA264_03145at 734.272 kb on - strand, within CA264_03145at 734.284 kb on - strand, within CA264_03145at 734.340 kb on - strand, within CA264_03145at 734.340 kb on - strand, within CA264_03145at 734.340 kb on - strand, within CA264_03145at 734.345 kb on + strand, within CA264_03145at 734.433 kb on + strand, within CA264_03145at 734.520 kb on + strand, within CA264_03145at 734.557 kb on + strand, within CA264_03145at 734.558 kb on - strand, within CA264_03145at 734.682 kb on + strand, within CA264_03145at 734.683 kb on - strand, within CA264_03145at 734.683 kb on - strand, within CA264_03145at 734.701 kb on - strand, within CA264_03145at 734.723 kb on - strand, within CA264_03145at 734.803 kb on - strand, within CA264_03145at 734.854 kb on - strand, within CA264_03145at 734.991 kb on + strand, within CA264_03145at 734.992 kb on - strand, within CA264_03145at 735.021 kb on + strand, within CA264_03145at 735.077 kb on - strand, within CA264_03145at 735.126 kb on + strand, within CA264_03145at 735.221 kb on + strand, within CA264_03145at 735.222 kb on - strand, within CA264_03145at 735.296 kb on + strand, within CA264_03145at 735.296 kb on + strand, within CA264_03145at 735.383 kb on - strand, within CA264_03145at 735.406 kb on - strand, within CA264_03145at 735.422 kb on + strand, within CA264_03145at 735.423 kb on - strand, within CA264_03145at 735.423 kb on - strand, within CA264_03145at 735.423 kb on - strand, within CA264_03145at 735.472 kb on - strand, within CA264_03145at 735.472 kb on - strand, within CA264_03145at 735.474 kb on + strand, within CA264_03145at 735.474 kb on + strand, within CA264_03145at 735.475 kb on - strand, within CA264_03145at 735.475 kb on - strand, within CA264_03145at 735.475 kb on - strand, within CA264_03145at 735.537 kb on + strandat 735.538 kb on - strandat 735.549 kb on + strandat 735.549 kb on + strandat 735.555 kb on - strandat 735.555 kb on - strandat 735.722 kb on + strandat 735.727 kb on + strandat 735.733 kb on - strandat 735.733 kb on - strandat 735.733 kb on - strandat 735.822 kb on - strandat 735.845 kb on + strandat 735.851 kb on + strandat 735.895 kb on + strandat 735.896 kb on - strandat 735.899 kb on + strandat 735.899 kb on + strandat 735.899 kb on + strandat 735.900 kb on - strandat 735.900 kb on - strandat 735.948 kb on - strandat 735.956 kb on - strandat 736.006 kb on - strandat 736.080 kb on + strandat 736.081 kb on - strandat 736.086 kb on - strandat 736.110 kb on + strandat 736.111 kb on - strandat 736.123 kb on + strandat 736.124 kb on - strandat 736.208 kb on + strand, within CA264_03150at 736.253 kb on + strand, within CA264_03150at 736.253 kb on + strand, within CA264_03150at 736.253 kb on + strand, within CA264_03150at 736.254 kb on - strand, within CA264_03150at 736.257 kb on + strand, within CA264_03150at 736.261 kb on - strand, within CA264_03150at 736.261 kb on - strand, within CA264_03150at 736.261 kb on - strand, within CA264_03150at 736.365 kb on + strand, within CA264_03150at 736.365 kb on + strand, within CA264_03150at 736.366 kb on - strand, within CA264_03150at 736.366 kb on - strand, within CA264_03150at 736.487 kb on - strand, within CA264_03150at 736.487 kb on - strand, within CA264_03150at 736.520 kb on + strand, within CA264_03150at 736.530 kb on - strand, within CA264_03150at 736.530 kb on - strand, within CA264_03150at 736.596 kb on + strand, within CA264_03150at 736.597 kb on - strand, within CA264_03150at 736.601 kb on + strand, within CA264_03150at 736.602 kb on - strand, within CA264_03150at 736.638 kb on + strand, within CA264_03150at 736.638 kb on + strand, within CA264_03150at 736.639 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.644 kb on - strand, within CA264_03150

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM
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732,943 + -0.1
732,943 + -0.9
732,998 - -0.5
732,998 - +0.4
733,001 + -0.2
733,063 + CA264_03140 0.12 +0.7
733,064 - CA264_03140 0.12 -0.0
733,090 + CA264_03140 0.15 -0.6
733,109 - CA264_03140 0.18 +0.1
733,109 - CA264_03140 0.18 -0.5
733,121 + CA264_03140 0.19 -0.3
733,162 + CA264_03140 0.24 +0.1
733,163 - CA264_03140 0.24 -0.6
733,184 - CA264_03140 0.26 -0.4
733,261 + CA264_03140 0.35 +0.2
733,262 - CA264_03140 0.35 +0.0
733,427 + CA264_03140 0.54 -0.1
733,430 - CA264_03140 0.54 +0.7
733,585 + CA264_03140 0.72 +1.3
733,612 + CA264_03140 0.75 -0.3
733,612 + CA264_03140 0.75 +0.4
733,613 - CA264_03140 0.75 -0.5
733,613 - CA264_03140 0.75 -0.4
733,613 - CA264_03140 0.75 -0.7
733,614 + CA264_03140 0.75 -0.8
733,614 + CA264_03140 0.75 -0.3
733,614 + CA264_03140 0.75 -1.1
733,614 + CA264_03140 0.75 +0.1
733,614 + CA264_03140 0.75 +1.0
733,614 + CA264_03140 0.75 -0.6
733,615 - CA264_03140 0.75 -0.6
733,615 - CA264_03140 0.75 +1.7
733,615 - CA264_03140 0.75 +0.1
733,615 - CA264_03140 0.75 -0.2
733,616 + CA264_03140 0.75 +0.4
733,617 - CA264_03140 0.75 +0.4
733,721 - CA264_03140 0.87 +0.4
733,721 - CA264_03140 0.87 -0.5
733,735 + CA264_03140 0.89 +0.3
733,822 + -0.1
733,823 - -0.5
733,872 + -1.2
733,880 + -1.2
734,007 - -1.0
734,007 - -2.5
734,095 - -0.3
734,225 + CA264_03145 0.17 +0.4
734,228 + CA264_03145 0.17 +0.7
734,229 - CA264_03145 0.17 -0.1
734,229 - CA264_03145 0.17 +0.3
734,272 - CA264_03145 0.19 -1.1
734,284 - CA264_03145 0.20 -0.0
734,340 - CA264_03145 0.23 -0.4
734,340 - CA264_03145 0.23 -0.7
734,340 - CA264_03145 0.23 +0.4
734,345 + CA264_03145 0.24 +1.0
734,433 + CA264_03145 0.29 -0.6
734,520 + CA264_03145 0.33 +1.7
734,557 + CA264_03145 0.35 +0.0
734,558 - CA264_03145 0.36 -0.4
734,682 + CA264_03145 0.42 -0.4
734,683 - CA264_03145 0.43 -0.0
734,683 - CA264_03145 0.43 +0.1
734,701 - CA264_03145 0.44 -0.3
734,723 - CA264_03145 0.45 -0.3
734,803 - CA264_03145 0.49 +0.5
734,854 - CA264_03145 0.52 -0.1
734,991 + CA264_03145 0.60 -0.1
734,992 - CA264_03145 0.60 +0.7
735,021 + CA264_03145 0.62 -1.1
735,077 - CA264_03145 0.65 +0.8
735,126 + CA264_03145 0.67 -0.5
735,221 + CA264_03145 0.73 +0.2
735,222 - CA264_03145 0.73 -0.3
735,296 + CA264_03145 0.77 +0.8
735,296 + CA264_03145 0.77 -0.3
735,383 - CA264_03145 0.82 +0.1
735,406 - CA264_03145 0.83 +0.7
735,422 + CA264_03145 0.84 +1.2
735,423 - CA264_03145 0.84 +1.4
735,423 - CA264_03145 0.84 +1.3
735,423 - CA264_03145 0.84 +0.0
735,472 - CA264_03145 0.87 +0.4
735,472 - CA264_03145 0.87 +0.6
735,474 + CA264_03145 0.87 +0.3
735,474 + CA264_03145 0.87 +1.3
735,475 - CA264_03145 0.87 +0.0
735,475 - CA264_03145 0.87 +0.1
735,475 - CA264_03145 0.87 +0.2
735,537 + -0.0
735,538 - +0.1
735,549 + -0.7
735,549 + +0.2
735,555 - -0.2
735,555 - +0.0
735,722 + +0.1
735,727 + -0.5
735,733 - -0.1
735,733 - +1.9
735,733 - +0.6
735,822 - +0.6
735,845 + -1.3
735,851 + +0.5
735,895 + -0.1
735,896 - +0.5
735,899 + -1.2
735,899 + -0.6
735,899 + -0.4
735,900 - -0.5
735,900 - -1.2
735,948 - +0.1
735,956 - -1.1
736,006 - +0.1
736,080 + +0.1
736,081 - -0.1
736,086 - -0.2
736,110 + +0.2
736,111 - -0.1
736,123 + -0.6
736,124 - -0.1
736,208 + CA264_03150 0.14 -0.2
736,253 + CA264_03150 0.18 +0.1
736,253 + CA264_03150 0.18 -0.2
736,253 + CA264_03150 0.18 -1.4
736,254 - CA264_03150 0.18 +0.3
736,257 + CA264_03150 0.18 +0.3
736,261 - CA264_03150 0.19 +0.7
736,261 - CA264_03150 0.19 +0.5
736,261 - CA264_03150 0.19 +0.2
736,365 + CA264_03150 0.27 -0.6
736,365 + CA264_03150 0.27 +0.1
736,366 - CA264_03150 0.28 -0.6
736,366 - CA264_03150 0.28 -0.1
736,487 - CA264_03150 0.38 +0.2
736,487 - CA264_03150 0.38 -1.1
736,520 + CA264_03150 0.40 +0.7
736,530 - CA264_03150 0.41 -0.2
736,530 - CA264_03150 0.41 +1.7
736,596 + CA264_03150 0.47 +0.0
736,597 - CA264_03150 0.47 +0.4
736,601 + CA264_03150 0.47 +0.0
736,602 - CA264_03150 0.47 +0.3
736,638 + CA264_03150 0.50 -1.0
736,638 + CA264_03150 0.50 +1.4
736,639 - CA264_03150 0.50 +0.6
736,642 - CA264_03150 0.50 -0.5
736,642 - CA264_03150 0.50 +0.0
736,642 - CA264_03150 0.50 -0.5
736,642 - CA264_03150 0.50 +0.1
736,642 - CA264_03150 0.50 -0.0
736,642 - CA264_03150 0.50 +0.8
736,644 - CA264_03150 0.51 -0.4

Or see this region's nucleotide sequence