Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01640 and CA264_01645 are separated by 354 nucleotides CA264_01645 and CA264_01650 are separated by 168 nucleotides CA264_01650 and CA264_01655 are separated by 307 nucleotides
CA264_01640: CA264_01640 - DEAD/DEAH box helicase, at 385,758 to 387,176
_01640
CA264_01645: CA264_01645 - hypothetical protein, at 387,531 to 387,713
_01645
CA264_01650: CA264_01650 - YebC/PmpR family DNA-binding transcriptional regulator, at 387,882 to 388,637
_01650
CA264_01655: CA264_01655 - CoA transferase, at 388,945 to 390,054
_01655
Position (kb) 387
388
389 Strain fitness (log2 ratio) -1
0
1
2 at 386.973 kb on + strand, within CA264_01640 at 386.974 kb on - strand, within CA264_01640 at 386.974 kb on - strand, within CA264_01640 at 386.974 kb on - strand, within CA264_01640 at 387.029 kb on - strand, within CA264_01640 at 387.053 kb on + strand at 387.054 kb on - strand at 387.169 kb on + strand at 387.254 kb on - strand at 387.295 kb on - strand at 387.300 kb on + strand at 387.301 kb on - strand at 387.304 kb on - strand at 387.306 kb on - strand at 387.306 kb on - strand at 387.310 kb on - strand at 387.354 kb on + strand at 387.383 kb on + strand at 387.471 kb on + strand at 387.471 kb on + strand at 387.471 kb on + strand at 387.471 kb on + strand at 387.472 kb on - strand at 387.472 kb on - strand at 387.472 kb on - strand at 387.503 kb on + strand at 387.504 kb on - strand at 387.530 kb on - strand at 387.579 kb on - strand, within CA264_01645 at 387.633 kb on + strand, within CA264_01645 at 387.683 kb on + strand, within CA264_01645 at 387.690 kb on + strand, within CA264_01645 at 387.741 kb on + strand at 387.882 kb on - strand at 387.953 kb on - strand at 388.040 kb on - strand, within CA264_01650 at 388.040 kb on - strand, within CA264_01650 at 388.040 kb on - strand, within CA264_01650 at 388.138 kb on - strand, within CA264_01650 at 388.171 kb on - strand, within CA264_01650 at 388.171 kb on - strand, within CA264_01650 at 388.171 kb on - strand, within CA264_01650 at 388.203 kb on - strand, within CA264_01650 at 388.268 kb on - strand, within CA264_01650 at 388.395 kb on + strand, within CA264_01650 at 388.407 kb on + strand, within CA264_01650 at 388.407 kb on + strand, within CA264_01650 at 388.407 kb on + strand, within CA264_01650 at 388.407 kb on + strand, within CA264_01650 at 388.407 kb on + strand, within CA264_01650 at 388.407 kb on + strand, within CA264_01650 at 388.408 kb on - strand, within CA264_01650 at 388.408 kb on - strand, within CA264_01650 at 388.408 kb on - strand, within CA264_01650 at 388.513 kb on + strand, within CA264_01650 at 388.589 kb on - strand at 388.590 kb on + strand at 388.590 kb on + strand at 388.591 kb on - strand at 388.591 kb on - strand at 388.591 kb on - strand at 388.596 kb on - strand at 388.636 kb on - strand at 388.647 kb on + strand at 388.648 kb on - strand at 388.648 kb on - strand at 388.651 kb on - strand at 388.660 kb on + strand at 388.661 kb on - strand at 388.724 kb on - strand at 388.724 kb on - strand at 388.745 kb on + strand at 388.745 kb on + strand at 388.745 kb on + strand at 388.922 kb on + strand at 388.923 kb on - strand at 388.928 kb on - strand at 388.941 kb on - strand at 388.963 kb on - strand at 389.049 kb on + strand at 389.049 kb on + strand at 389.049 kb on + strand at 389.210 kb on - strand, within CA264_01655 at 389.210 kb on - strand, within CA264_01655 at 389.235 kb on - strand, within CA264_01655 at 389.235 kb on - strand, within CA264_01655 at 389.248 kb on + strand, within CA264_01655 at 389.249 kb on - strand, within CA264_01655 at 389.279 kb on + strand, within CA264_01655 at 389.285 kb on - strand, within CA264_01655 at 389.320 kb on + strand, within CA264_01655 at 389.365 kb on + strand, within CA264_01655 at 389.366 kb on - strand, within CA264_01655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 386,973 + CA264_01640 0.86 -0.3 386,974 - CA264_01640 0.86 +0.6 386,974 - CA264_01640 0.86 -0.8 386,974 - CA264_01640 0.86 -0.3 387,029 - CA264_01640 0.90 -0.2 387,053 + -1.3 387,054 - -1.4 387,169 + -0.3 387,254 - +0.9 387,295 - -0.1 387,300 + +0.6 387,301 - +0.4 387,304 - -0.2 387,306 - +0.0 387,306 - -0.4 387,310 - +0.3 387,354 + -0.2 387,383 + +0.6 387,471 + -0.2 387,471 + +0.1 387,471 + -0.7 387,471 + +0.1 387,472 - -1.2 387,472 - -0.0 387,472 - -0.4 387,503 + +1.1 387,504 - -0.5 387,530 - -1.4 387,579 - CA264_01645 0.26 +0.6 387,633 + CA264_01645 0.56 -0.4 387,683 + CA264_01645 0.83 -0.2 387,690 + CA264_01645 0.87 -1.3 387,741 + +0.5 387,882 - -0.2 387,953 - -0.4 388,040 - CA264_01650 0.21 -0.9 388,040 - CA264_01650 0.21 -0.0 388,040 - CA264_01650 0.21 -0.1 388,138 - CA264_01650 0.34 -1.0 388,171 - CA264_01650 0.38 -0.2 388,171 - CA264_01650 0.38 -0.4 388,171 - CA264_01650 0.38 -0.1 388,203 - CA264_01650 0.42 -0.5 388,268 - CA264_01650 0.51 +0.1 388,395 + CA264_01650 0.68 -0.4 388,407 + CA264_01650 0.69 -0.6 388,407 + CA264_01650 0.69 +0.0 388,407 + CA264_01650 0.69 +0.4 388,407 + CA264_01650 0.69 -1.7 388,407 + CA264_01650 0.69 -0.7 388,407 + CA264_01650 0.69 +1.1 388,408 - CA264_01650 0.70 -0.7 388,408 - CA264_01650 0.70 +0.2 388,408 - CA264_01650 0.70 -1.3 388,513 + CA264_01650 0.83 -1.5 388,589 - -0.0 388,590 + +0.6 388,590 + -0.7 388,591 - -0.4 388,591 - +1.3 388,591 - +0.0 388,596 - -0.3 388,636 - -1.7 388,647 + +0.2 388,648 - +0.7 388,648 - +2.3 388,651 - -0.0 388,660 + +0.7 388,661 - -0.4 388,724 - +0.6 388,724 - -0.2 388,745 + -0.0 388,745 + +0.2 388,745 + -0.3 388,922 + +1.2 388,923 - +0.1 388,928 - -0.1 388,941 - +0.8 388,963 - +0.0 389,049 + +0.6 389,049 + -0.9 389,049 + -0.1 389,210 - CA264_01655 0.24 -0.8 389,210 - CA264_01655 0.24 +0.7 389,235 - CA264_01655 0.26 +0.0 389,235 - CA264_01655 0.26 +0.9 389,248 + CA264_01655 0.27 -0.6 389,249 - CA264_01655 0.27 -0.0 389,279 + CA264_01655 0.30 +0.7 389,285 - CA264_01655 0.31 -0.9 389,320 + CA264_01655 0.34 +0.1 389,365 + CA264_01655 0.38 +1.1 389,366 - CA264_01655 0.38 -0.2
Or see this region's nucleotide sequence