Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00490 and CA264_00495 are separated by 287 nucleotides CA264_00495 and CA264_00500 overlap by 101 nucleotides
CA264_00490: CA264_00490 - TonB-dependent siderophore receptor, at 107,345 to 109,738
_00490
CA264_00495: CA264_00495 - hypothetical protein, at 110,026 to 111,225
_00495
CA264_00500: CA264_00500 - hypothetical protein, at 111,125 to 113,461
_00500
Position (kb)
110
111
112 Strain fitness (log2 ratio)
-1
0
1
2
3 at 109.043 kb on - strand, within CA264_00490 at 109.179 kb on + strand, within CA264_00490 at 109.179 kb on + strand, within CA264_00490 at 109.179 kb on + strand, within CA264_00490 at 109.180 kb on - strand, within CA264_00490 at 109.236 kb on - strand, within CA264_00490 at 109.238 kb on + strand, within CA264_00490 at 109.238 kb on + strand, within CA264_00490 at 109.244 kb on - strand, within CA264_00490 at 109.266 kb on - strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.287 kb on - strand, within CA264_00490 at 109.287 kb on - strand, within CA264_00490 at 109.353 kb on + strand, within CA264_00490 at 109.441 kb on + strand, within CA264_00490 at 109.442 kb on - strand, within CA264_00490 at 109.446 kb on - strand, within CA264_00490 at 109.446 kb on - strand, within CA264_00490 at 109.499 kb on - strand at 109.500 kb on + strand at 109.500 kb on + strand at 109.505 kb on - strand at 109.575 kb on - strand at 109.673 kb on + strand at 109.673 kb on + strand at 109.718 kb on + strand at 109.718 kb on + strand at 109.721 kb on + strand at 109.721 kb on + strand at 109.722 kb on - strand at 109.724 kb on - strand at 109.738 kb on + strand at 109.739 kb on - strand at 109.747 kb on + strand at 109.748 kb on - strand at 109.748 kb on - strand at 109.750 kb on + strand at 109.819 kb on + strand at 109.819 kb on + strand at 109.859 kb on + strand at 109.859 kb on + strand at 109.862 kb on + strand at 109.862 kb on + strand at 109.862 kb on + strand at 109.863 kb on - strand at 109.867 kb on - strand at 109.867 kb on - strand at 109.867 kb on - strand at 109.869 kb on - strand at 109.880 kb on + strand at 109.881 kb on - strand at 109.886 kb on + strand at 109.910 kb on - strand at 109.953 kb on + strand at 109.953 kb on + strand at 109.953 kb on + strand at 110.010 kb on + strand at 110.010 kb on + strand at 110.011 kb on - strand at 110.022 kb on + strand at 110.023 kb on - strand at 110.237 kb on + strand, within CA264_00495 at 110.238 kb on - strand, within CA264_00495 at 110.298 kb on - strand, within CA264_00495 at 110.300 kb on + strand, within CA264_00495 at 110.301 kb on - strand, within CA264_00495 at 110.336 kb on - strand, within CA264_00495 at 110.336 kb on - strand, within CA264_00495 at 110.369 kb on + strand, within CA264_00495 at 110.369 kb on + strand, within CA264_00495 at 110.370 kb on - strand, within CA264_00495 at 110.370 kb on - strand, within CA264_00495 at 110.373 kb on + strand, within CA264_00495 at 110.373 kb on + strand, within CA264_00495 at 110.373 kb on + strand, within CA264_00495 at 110.374 kb on - strand, within CA264_00495 at 110.485 kb on + strand, within CA264_00495 at 110.491 kb on - strand, within CA264_00495 at 110.519 kb on - strand, within CA264_00495 at 110.529 kb on + strand, within CA264_00495 at 110.573 kb on + strand, within CA264_00495 at 110.573 kb on + strand, within CA264_00495 at 110.593 kb on - strand, within CA264_00495 at 110.647 kb on + strand, within CA264_00495 at 110.648 kb on - strand, within CA264_00495 at 110.649 kb on + strand, within CA264_00495 at 110.732 kb on + strand, within CA264_00495 at 110.753 kb on + strand, within CA264_00495 at 110.784 kb on + strand, within CA264_00495 at 110.785 kb on - strand, within CA264_00495 at 110.788 kb on + strand, within CA264_00495 at 110.788 kb on + strand, within CA264_00495 at 110.893 kb on - strand, within CA264_00495 at 110.893 kb on - strand, within CA264_00495 at 110.990 kb on + strand, within CA264_00495 at 110.990 kb on + strand, within CA264_00495 at 110.990 kb on + strand, within CA264_00495 at 110.991 kb on - strand, within CA264_00495 at 111.004 kb on + strand, within CA264_00495 at 111.004 kb on + strand, within CA264_00495 at 111.004 kb on + strand, within CA264_00495 at 111.005 kb on - strand, within CA264_00495 at 111.006 kb on + strand, within CA264_00495 at 111.006 kb on + strand, within CA264_00495 at 111.006 kb on + strand, within CA264_00495 at 111.007 kb on - strand, within CA264_00495 at 111.027 kb on + strand, within CA264_00495 at 111.089 kb on - strand, within CA264_00495 at 111.126 kb on + strand at 111.196 kb on - strand at 111.201 kb on + strand at 111.216 kb on + strand at 111.216 kb on + strand at 111.219 kb on + strand at 111.220 kb on - strand at 111.220 kb on - strand at 111.422 kb on + strand, within CA264_00500 at 111.513 kb on - strand, within CA264_00500 at 111.594 kb on - strand, within CA264_00500 at 111.603 kb on - strand, within CA264_00500 at 111.697 kb on + strand, within CA264_00500 at 111.752 kb on - strand, within CA264_00500 at 111.779 kb on - strand, within CA264_00500 at 111.804 kb on + strand, within CA264_00500 at 111.804 kb on + strand, within CA264_00500 at 111.813 kb on - strand, within CA264_00500 at 111.840 kb on + strand, within CA264_00500 at 111.840 kb on + strand, within CA264_00500 at 111.841 kb on - strand, within CA264_00500 at 111.888 kb on - strand, within CA264_00500 at 111.892 kb on + strand, within CA264_00500 at 111.998 kb on - strand, within CA264_00500 at 112.003 kb on - strand, within CA264_00500 at 112.044 kb on - strand, within CA264_00500 at 112.109 kb on + strand, within CA264_00500 at 112.109 kb on + strand, within CA264_00500 at 112.140 kb on + strand, within CA264_00500 at 112.153 kb on - strand, within CA264_00500 at 112.156 kb on + strand, within CA264_00500 at 112.157 kb on - strand, within CA264_00500
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 109,043 - CA264_00490 0.71 +0.3 109,179 + CA264_00490 0.77 -0.1 109,179 + CA264_00490 0.77 +1.0 109,179 + CA264_00490 0.77 -0.8 109,180 - CA264_00490 0.77 -0.3 109,236 - CA264_00490 0.79 +1.5 109,238 + CA264_00490 0.79 -0.4 109,238 + CA264_00490 0.79 -0.1 109,244 - CA264_00490 0.79 +0.1 109,266 - CA264_00490 0.80 +0.5 109,286 + CA264_00490 0.81 -0.6 109,286 + CA264_00490 0.81 -0.0 109,286 + CA264_00490 0.81 +0.6 109,286 + CA264_00490 0.81 -0.2 109,286 + CA264_00490 0.81 -0.3 109,287 - CA264_00490 0.81 +0.6 109,287 - CA264_00490 0.81 -0.1 109,353 + CA264_00490 0.84 -0.4 109,441 + CA264_00490 0.88 -0.6 109,442 - CA264_00490 0.88 +1.0 109,446 - CA264_00490 0.88 -0.8 109,446 - CA264_00490 0.88 -0.1 109,499 - -0.6 109,500 + +0.4 109,500 + -0.9 109,505 - +0.7 109,575 - +0.7 109,673 + -0.1 109,673 + +0.4 109,718 + +0.0 109,718 + -0.0 109,721 + -0.5 109,721 + +0.5 109,722 - -0.4 109,724 - +1.6 109,738 + -0.5 109,739 - +0.8 109,747 + +0.6 109,748 - +0.3 109,748 - +2.2 109,750 + +0.1 109,819 + +0.2 109,819 + +0.0 109,859 + -0.5 109,859 + +0.2 109,862 + +0.0 109,862 + +0.4 109,862 + -0.8 109,863 - +0.3 109,867 - -1.3 109,867 - -0.0 109,867 - -0.1 109,869 - -0.2 109,880 + -0.3 109,881 - -0.4 109,886 + -0.2 109,910 - -0.3 109,953 + -0.1 109,953 + +0.0 109,953 + -0.1 110,010 + +0.1 110,010 + -0.5 110,011 - +1.2 110,022 + +0.3 110,023 - -0.3 110,237 + CA264_00495 0.18 +0.1 110,238 - CA264_00495 0.18 -0.4 110,298 - CA264_00495 0.23 -1.2 110,300 + CA264_00495 0.23 +0.2 110,301 - CA264_00495 0.23 -1.6 110,336 - CA264_00495 0.26 -1.2 110,336 - CA264_00495 0.26 -0.1 110,369 + CA264_00495 0.29 -0.9 110,369 + CA264_00495 0.29 -0.7 110,370 - CA264_00495 0.29 -0.6 110,370 - CA264_00495 0.29 +0.7 110,373 + CA264_00495 0.29 -1.6 110,373 + CA264_00495 0.29 +0.6 110,373 + CA264_00495 0.29 -0.6 110,374 - CA264_00495 0.29 -0.8 110,485 + CA264_00495 0.38 -0.7 110,491 - CA264_00495 0.39 +1.1 110,519 - CA264_00495 0.41 +0.1 110,529 + CA264_00495 0.42 +0.2 110,573 + CA264_00495 0.46 -0.5 110,573 + CA264_00495 0.46 +0.0 110,593 - CA264_00495 0.47 +0.2 110,647 + CA264_00495 0.52 -0.4 110,648 - CA264_00495 0.52 -1.2 110,649 + CA264_00495 0.52 -0.1 110,732 + CA264_00495 0.59 -1.0 110,753 + CA264_00495 0.61 +1.7 110,784 + CA264_00495 0.63 -0.6 110,785 - CA264_00495 0.63 -0.3 110,788 + CA264_00495 0.64 -0.4 110,788 + CA264_00495 0.64 -0.4 110,893 - CA264_00495 0.72 +0.5 110,893 - CA264_00495 0.72 -0.0 110,990 + CA264_00495 0.80 +0.3 110,990 + CA264_00495 0.80 +0.9 110,990 + CA264_00495 0.80 +0.5 110,991 - CA264_00495 0.80 -0.2 111,004 + CA264_00495 0.81 -0.1 111,004 + CA264_00495 0.81 -0.5 111,004 + CA264_00495 0.81 -0.9 111,005 - CA264_00495 0.82 -0.1 111,006 + CA264_00495 0.82 +1.0 111,006 + CA264_00495 0.82 -0.8 111,006 + CA264_00495 0.82 -0.2 111,007 - CA264_00495 0.82 +0.2 111,027 + CA264_00495 0.83 +0.4 111,089 - CA264_00495 0.89 -0.5 111,126 + +0.3 111,196 - -1.3 111,201 + -0.3 111,216 + +0.3 111,216 + +0.7 111,219 + -0.5 111,220 - +0.9 111,220 - +0.3 111,422 + CA264_00500 0.13 +1.0 111,513 - CA264_00500 0.17 +0.4 111,594 - CA264_00500 0.20 +1.1 111,603 - CA264_00500 0.20 +0.1 111,697 + CA264_00500 0.24 +1.6 111,752 - CA264_00500 0.27 +0.3 111,779 - CA264_00500 0.28 +0.4 111,804 + CA264_00500 0.29 +0.1 111,804 + CA264_00500 0.29 +0.1 111,813 - CA264_00500 0.29 +0.7 111,840 + CA264_00500 0.31 -0.2 111,840 + CA264_00500 0.31 +0.4 111,841 - CA264_00500 0.31 +0.4 111,888 - CA264_00500 0.33 -0.2 111,892 + CA264_00500 0.33 +0.5 111,998 - CA264_00500 0.37 -0.8 112,003 - CA264_00500 0.38 +0.6 112,044 - CA264_00500 0.39 +2.3 112,109 + CA264_00500 0.42 +1.7 112,109 + CA264_00500 0.42 -0.3 112,140 + CA264_00500 0.43 -0.2 112,153 - CA264_00500 0.44 +3.3 112,156 + CA264_00500 0.44 +1.2 112,157 - CA264_00500 0.44 +1.3
Or see this region's nucleotide sequence