Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_21975 and OH686_21980 are separated by 14 nucleotides OH686_21980 and OH686_21985 are separated by 61 nucleotides OH686_21985 and OH686_21990 are separated by 13 nucleotides
OH686_21975: OH686_21975 - beta-N-acetylglucosaminidase , at 4,475,251 to 4,476,261
_21975
OH686_21980: OH686_21980 - methylthioadenosine phosphorylase, at 4,476,276 to 4,477,013
_21980
OH686_21985: OH686_21985 - hypothetical protein, at 4,477,075 to 4,477,599
_21985
OH686_21990: OH686_21990 - transcription-repair coupling factor, at 4,477,613 to 4,481,053
_21990
Position (kb)
4477
4478 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4476.264 kb on + strand at 4476.264 kb on + strand at 4476.264 kb on + strand at 4476.265 kb on - strand at 4476.265 kb on - strand at 4476.285 kb on + strand at 4476.285 kb on + strand at 4476.285 kb on + strand at 4476.285 kb on + strand at 4476.285 kb on + strand at 4476.285 kb on + strand at 4476.285 kb on + strand at 4476.286 kb on - strand at 4476.286 kb on - strand at 4476.286 kb on - strand at 4476.286 kb on - strand at 4476.286 kb on - strand at 4476.286 kb on - strand at 4476.286 kb on - strand at 4476.286 kb on - strand at 4476.334 kb on + strand at 4476.334 kb on + strand at 4476.334 kb on + strand at 4476.363 kb on + strand, within OH686_21980 at 4476.363 kb on + strand, within OH686_21980 at 4476.399 kb on + strand, within OH686_21980 at 4476.400 kb on - strand, within OH686_21980 at 4476.471 kb on + strand, within OH686_21980 at 4476.471 kb on + strand, within OH686_21980 at 4476.472 kb on - strand, within OH686_21980 at 4476.472 kb on - strand, within OH686_21980 at 4476.597 kb on + strand, within OH686_21980 at 4476.597 kb on + strand, within OH686_21980 at 4476.597 kb on + strand, within OH686_21980 at 4476.597 kb on + strand, within OH686_21980 at 4476.597 kb on + strand, within OH686_21980 at 4476.597 kb on + strand, within OH686_21980 at 4476.597 kb on + strand, within OH686_21980 at 4476.597 kb on + strand, within OH686_21980 at 4476.598 kb on - strand, within OH686_21980 at 4476.598 kb on - strand, within OH686_21980 at 4476.666 kb on + strand, within OH686_21980 at 4476.666 kb on + strand, within OH686_21980 at 4476.667 kb on - strand, within OH686_21980 at 4476.747 kb on + strand, within OH686_21980 at 4476.877 kb on - strand, within OH686_21980 at 4476.979 kb on + strand at 4476.980 kb on - strand at 4476.980 kb on - strand at 4476.980 kb on - strand at 4476.980 kb on - strand at 4477.099 kb on + strand at 4477.124 kb on + strand at 4477.124 kb on + strand at 4477.124 kb on + strand at 4477.125 kb on - strand at 4477.371 kb on - strand, within OH686_21985 at 4477.657 kb on + strand at 4477.725 kb on + strand at 4477.725 kb on + strand at 4477.725 kb on + strand at 4477.725 kb on + strand at 4477.977 kb on + strand, within OH686_21990 at 4477.978 kb on - strand, within OH686_21990 at 4477.978 kb on - strand, within OH686_21990 at 4477.978 kb on - strand, within OH686_21990 at 4478.010 kb on + strand, within OH686_21990 at 4478.011 kb on - strand, within OH686_21990 at 4478.011 kb on - strand, within OH686_21990 at 4478.133 kb on + strand, within OH686_21990 at 4478.133 kb on + strand, within OH686_21990 at 4478.133 kb on + strand, within OH686_21990 at 4478.133 kb on + strand, within OH686_21990 at 4478.133 kb on + strand, within OH686_21990 at 4478.133 kb on + strand, within OH686_21990 at 4478.133 kb on + strand, within OH686_21990 at 4478.133 kb on + strand, within OH686_21990 at 4478.133 kb on + strand, within OH686_21990 at 4478.134 kb on - strand, within OH686_21990 at 4478.134 kb on - strand, within OH686_21990 at 4478.134 kb on - strand, within OH686_21990 at 4478.134 kb on - strand, within OH686_21990 at 4478.134 kb on - strand, within OH686_21990 at 4478.134 kb on - strand, within OH686_21990 at 4478.319 kb on + strand, within OH686_21990 at 4478.319 kb on + strand, within OH686_21990 at 4478.320 kb on - strand, within OH686_21990 at 4478.320 kb on - strand, within OH686_21990 at 4478.325 kb on + strand, within OH686_21990 at 4478.484 kb on + strand, within OH686_21990 at 4478.484 kb on + strand, within OH686_21990 at 4478.484 kb on + strand, within OH686_21990 at 4478.484 kb on + strand, within OH686_21990 at 4478.485 kb on - strand, within OH686_21990 at 4478.485 kb on - strand, within OH686_21990
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 4,476,264 + -0.2 4,476,264 + -0.2 4,476,264 + -0.4 4,476,265 - +0.1 4,476,265 - -0.2 4,476,285 + -0.2 4,476,285 + +0.6 4,476,285 + +0.2 4,476,285 + -0.8 4,476,285 + -0.6 4,476,285 + +0.7 4,476,285 + -0.1 4,476,286 - +0.8 4,476,286 - +0.3 4,476,286 - -0.3 4,476,286 - +1.4 4,476,286 - -0.8 4,476,286 - -1.5 4,476,286 - +0.3 4,476,286 - +0.4 4,476,334 + +0.7 4,476,334 + -0.0 4,476,334 + -0.0 4,476,363 + OH686_21980 0.12 -1.8 4,476,363 + OH686_21980 0.12 -1.8 4,476,399 + OH686_21980 0.17 -0.4 4,476,400 - OH686_21980 0.17 +1.1 4,476,471 + OH686_21980 0.26 +0.2 4,476,471 + OH686_21980 0.26 +0.2 4,476,472 - OH686_21980 0.27 -1.0 4,476,472 - OH686_21980 0.27 +0.8 4,476,597 + OH686_21980 0.43 -0.1 4,476,597 + OH686_21980 0.43 -1.7 4,476,597 + OH686_21980 0.43 -0.8 4,476,597 + OH686_21980 0.43 -0.5 4,476,597 + OH686_21980 0.43 -0.7 4,476,597 + OH686_21980 0.43 +2.0 4,476,597 + OH686_21980 0.43 +0.0 4,476,597 + OH686_21980 0.43 -1.8 4,476,598 - OH686_21980 0.44 -0.2 4,476,598 - OH686_21980 0.44 -0.8 4,476,666 + OH686_21980 0.53 -0.9 4,476,666 + OH686_21980 0.53 -1.4 4,476,667 - OH686_21980 0.53 -1.2 4,476,747 + OH686_21980 0.64 +1.4 4,476,877 - OH686_21980 0.81 -0.7 4,476,979 + -0.2 4,476,980 - +1.0 4,476,980 - -1.1 4,476,980 - -1.2 4,476,980 - +0.0 4,477,099 + +1.2 4,477,124 + +0.1 4,477,124 + -0.1 4,477,124 + -0.4 4,477,125 - -0.9 4,477,371 - OH686_21985 0.56 -0.2 4,477,657 + -1.1 4,477,725 + -0.7 4,477,725 + -1.3 4,477,725 + -2.4 4,477,725 + -0.4 4,477,977 + OH686_21990 0.11 -0.4 4,477,978 - OH686_21990 0.11 +0.4 4,477,978 - OH686_21990 0.11 -0.9 4,477,978 - OH686_21990 0.11 -0.7 4,478,010 + OH686_21990 0.12 +0.4 4,478,011 - OH686_21990 0.12 -0.0 4,478,011 - OH686_21990 0.12 +1.1 4,478,133 + OH686_21990 0.15 -1.4 4,478,133 + OH686_21990 0.15 -0.6 4,478,133 + OH686_21990 0.15 -0.6 4,478,133 + OH686_21990 0.15 +0.8 4,478,133 + OH686_21990 0.15 +0.6 4,478,133 + OH686_21990 0.15 +0.1 4,478,133 + OH686_21990 0.15 -1.6 4,478,133 + OH686_21990 0.15 +0.3 4,478,133 + OH686_21990 0.15 +0.1 4,478,134 - OH686_21990 0.15 +1.6 4,478,134 - OH686_21990 0.15 -2.0 4,478,134 - OH686_21990 0.15 -0.9 4,478,134 - OH686_21990 0.15 -1.8 4,478,134 - OH686_21990 0.15 +1.0 4,478,134 - OH686_21990 0.15 -1.9 4,478,319 + OH686_21990 0.21 -1.3 4,478,319 + OH686_21990 0.21 +0.2 4,478,320 - OH686_21990 0.21 +0.4 4,478,320 - OH686_21990 0.21 +1.1 4,478,325 + OH686_21990 0.21 +0.1 4,478,484 + OH686_21990 0.25 +0.2 4,478,484 + OH686_21990 0.25 +0.7 4,478,484 + OH686_21990 0.25 -0.5 4,478,484 + OH686_21990 0.25 -0.7 4,478,485 - OH686_21990 0.25 +0.0 4,478,485 - OH686_21990 0.25 +0.0
Or see this region's nucleotide sequence