Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_08800 and OH686_08805 are separated by 192 nucleotides OH686_08805 and OH686_08810 are separated by 52 nucleotides
OH686_08800: OH686_08800 - ATP-dependent helicase HrpB, at 1,791,118 to 1,793,640
_08800
OH686_08805: OH686_08805 - Uncharacterized protein, at 1,793,833 to 1,794,249
_08805
OH686_08810: OH686_08810 - Ferrous-iron efflux pump FieF, at 1,794,302 to 1,795,186
_08810
Position (kb)
1793
1794
1795 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1792.978 kb on + strand, within OH686_08800 at 1792.978 kb on + strand, within OH686_08800 at 1792.978 kb on + strand, within OH686_08800 at 1792.978 kb on + strand, within OH686_08800 at 1792.979 kb on - strand, within OH686_08800 at 1793.359 kb on - strand, within OH686_08800 at 1793.667 kb on - strand at 1793.667 kb on - strand at 1793.667 kb on - strand at 1793.667 kb on - strand at 1793.667 kb on - strand at 1793.668 kb on + strand at 1793.668 kb on + strand at 1793.668 kb on + strand at 1793.668 kb on + strand at 1793.668 kb on + strand at 1793.669 kb on - strand at 1793.669 kb on - strand at 1793.669 kb on - strand at 1793.669 kb on - strand at 1793.669 kb on - strand at 1793.802 kb on + strand at 1793.802 kb on + strand at 1793.802 kb on + strand at 1793.802 kb on + strand at 1793.802 kb on + strand at 1793.802 kb on + strand at 1793.802 kb on + strand at 1793.802 kb on + strand at 1793.802 kb on + strand at 1793.803 kb on - strand at 1793.803 kb on - strand at 1793.803 kb on - strand at 1793.803 kb on - strand at 1793.803 kb on - strand at 1793.803 kb on - strand at 1793.803 kb on - strand at 1793.804 kb on + strand at 1793.804 kb on + strand at 1793.805 kb on - strand at 1793.805 kb on - strand at 1793.805 kb on - strand at 1793.805 kb on - strand at 1793.992 kb on + strand, within OH686_08805 at 1793.992 kb on + strand, within OH686_08805 at 1793.992 kb on + strand, within OH686_08805 at 1793.992 kb on + strand, within OH686_08805 at 1793.992 kb on + strand, within OH686_08805 at 1793.992 kb on + strand, within OH686_08805 at 1793.992 kb on + strand, within OH686_08805 at 1793.992 kb on + strand, within OH686_08805 at 1793.992 kb on + strand, within OH686_08805 at 1793.993 kb on - strand, within OH686_08805 at 1793.993 kb on - strand, within OH686_08805 at 1793.993 kb on - strand, within OH686_08805 at 1793.993 kb on - strand, within OH686_08805 at 1793.993 kb on - strand, within OH686_08805 at 1793.993 kb on - strand, within OH686_08805 at 1793.993 kb on - strand, within OH686_08805 at 1793.993 kb on - strand, within OH686_08805 at 1793.993 kb on - strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.046 kb on + strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.047 kb on - strand, within OH686_08805 at 1794.064 kb on + strand, within OH686_08805 at 1794.064 kb on + strand, within OH686_08805 at 1794.491 kb on + strand, within OH686_08810 at 1794.491 kb on + strand, within OH686_08810 at 1794.491 kb on + strand, within OH686_08810 at 1794.491 kb on + strand, within OH686_08810 at 1794.491 kb on + strand, within OH686_08810 at 1794.492 kb on - strand, within OH686_08810 at 1794.492 kb on - strand, within OH686_08810 at 1794.492 kb on - strand, within OH686_08810 at 1794.492 kb on - strand, within OH686_08810 at 1794.525 kb on - strand, within OH686_08810 at 1794.702 kb on + strand, within OH686_08810 at 1794.702 kb on + strand, within OH686_08810 at 1794.702 kb on + strand, within OH686_08810 at 1794.702 kb on + strand, within OH686_08810 at 1794.702 kb on + strand, within OH686_08810 at 1794.702 kb on + strand, within OH686_08810 at 1794.703 kb on - strand, within OH686_08810 at 1794.703 kb on - strand, within OH686_08810 at 1794.703 kb on - strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.872 kb on + strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.873 kb on - strand, within OH686_08810 at 1794.918 kb on + strand, within OH686_08810 at 1795.077 kb on + strand, within OH686_08810 at 1795.078 kb on - strand, within OH686_08810 at 1795.078 kb on - strand, within OH686_08810 at 1795.247 kb on + strand at 1795.248 kb on - strand at 1795.248 kb on - strand at 1795.248 kb on - strand at 1795.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 1,792,978 + OH686_08800 0.74 -0.4 1,792,978 + OH686_08800 0.74 -0.3 1,792,978 + OH686_08800 0.74 +0.4 1,792,978 + OH686_08800 0.74 -0.5 1,792,979 - OH686_08800 0.74 -0.4 1,793,359 - OH686_08800 0.89 -0.9 1,793,667 - -0.6 1,793,667 - +1.1 1,793,667 - -0.2 1,793,667 - -0.4 1,793,667 - -1.1 1,793,668 + -0.2 1,793,668 + -1.1 1,793,668 + -1.4 1,793,668 + -0.4 1,793,668 + +1.4 1,793,669 - +0.8 1,793,669 - -0.4 1,793,669 - -1.8 1,793,669 - -0.1 1,793,669 - -0.1 1,793,802 + +0.3 1,793,802 + -0.7 1,793,802 + +0.9 1,793,802 + +0.5 1,793,802 + -0.8 1,793,802 + -0.3 1,793,802 + +2.2 1,793,802 + +1.0 1,793,802 + +0.3 1,793,803 - +0.1 1,793,803 - -0.5 1,793,803 - -0.2 1,793,803 - -0.4 1,793,803 - -0.8 1,793,803 - -0.4 1,793,803 - +0.2 1,793,804 + +0.2 1,793,804 + -0.7 1,793,805 - -0.4 1,793,805 - -3.3 1,793,805 - +1.0 1,793,805 - +1.0 1,793,992 + OH686_08805 0.38 -1.6 1,793,992 + OH686_08805 0.38 +0.4 1,793,992 + OH686_08805 0.38 -0.8 1,793,992 + OH686_08805 0.38 -0.8 1,793,992 + OH686_08805 0.38 -1.7 1,793,992 + OH686_08805 0.38 +1.0 1,793,992 + OH686_08805 0.38 -1.0 1,793,992 + OH686_08805 0.38 +0.4 1,793,992 + OH686_08805 0.38 -2.3 1,793,993 - OH686_08805 0.38 -1.1 1,793,993 - OH686_08805 0.38 -1.8 1,793,993 - OH686_08805 0.38 -1.9 1,793,993 - OH686_08805 0.38 -2.3 1,793,993 - OH686_08805 0.38 -1.1 1,793,993 - OH686_08805 0.38 +0.4 1,793,993 - OH686_08805 0.38 -0.4 1,793,993 - OH686_08805 0.38 -1.9 1,793,993 - OH686_08805 0.38 -2.4 1,794,046 + OH686_08805 0.51 -0.4 1,794,046 + OH686_08805 0.51 -1.6 1,794,046 + OH686_08805 0.51 -1.3 1,794,046 + OH686_08805 0.51 -0.2 1,794,046 + OH686_08805 0.51 -0.8 1,794,046 + OH686_08805 0.51 -2.7 1,794,046 + OH686_08805 0.51 +1.0 1,794,046 + OH686_08805 0.51 -1.1 1,794,046 + OH686_08805 0.51 -0.1 1,794,046 + OH686_08805 0.51 -1.0 1,794,046 + OH686_08805 0.51 +0.1 1,794,046 + OH686_08805 0.51 -2.6 1,794,046 + OH686_08805 0.51 +0.6 1,794,046 + OH686_08805 0.51 -0.6 1,794,046 + OH686_08805 0.51 -1.4 1,794,047 - OH686_08805 0.51 -1.5 1,794,047 - OH686_08805 0.51 -0.9 1,794,047 - OH686_08805 0.51 -1.3 1,794,047 - OH686_08805 0.51 -2.7 1,794,047 - OH686_08805 0.51 +1.4 1,794,047 - OH686_08805 0.51 -1.1 1,794,047 - OH686_08805 0.51 -1.3 1,794,047 - OH686_08805 0.51 -2.3 1,794,047 - OH686_08805 0.51 +0.4 1,794,047 - OH686_08805 0.51 +1.4 1,794,047 - OH686_08805 0.51 -0.9 1,794,047 - OH686_08805 0.51 -2.4 1,794,047 - OH686_08805 0.51 -1.4 1,794,047 - OH686_08805 0.51 -1.3 1,794,047 - OH686_08805 0.51 -1.1 1,794,047 - OH686_08805 0.51 +0.1 1,794,047 - OH686_08805 0.51 -2.4 1,794,064 + OH686_08805 0.55 -1.1 1,794,064 + OH686_08805 0.55 -0.8 1,794,491 + OH686_08810 0.21 +1.4 1,794,491 + OH686_08810 0.21 -0.3 1,794,491 + OH686_08810 0.21 +0.1 1,794,491 + OH686_08810 0.21 -0.9 1,794,491 + OH686_08810 0.21 +0.7 1,794,492 - OH686_08810 0.21 -1.6 1,794,492 - OH686_08810 0.21 -0.7 1,794,492 - OH686_08810 0.21 -3.1 1,794,492 - OH686_08810 0.21 -0.7 1,794,525 - OH686_08810 0.25 -1.2 1,794,702 + OH686_08810 0.45 -0.1 1,794,702 + OH686_08810 0.45 -0.6 1,794,702 + OH686_08810 0.45 -0.4 1,794,702 + OH686_08810 0.45 -1.2 1,794,702 + OH686_08810 0.45 +0.7 1,794,702 + OH686_08810 0.45 +1.3 1,794,703 - OH686_08810 0.45 +0.1 1,794,703 - OH686_08810 0.45 -1.4 1,794,703 - OH686_08810 0.45 -2.5 1,794,872 + OH686_08810 0.64 +1.3 1,794,872 + OH686_08810 0.64 +0.0 1,794,872 + OH686_08810 0.64 +0.5 1,794,872 + OH686_08810 0.64 -0.1 1,794,872 + OH686_08810 0.64 -0.7 1,794,872 + OH686_08810 0.64 +0.0 1,794,872 + OH686_08810 0.64 -0.8 1,794,872 + OH686_08810 0.64 -0.4 1,794,872 + OH686_08810 0.64 +0.4 1,794,872 + OH686_08810 0.64 -0.5 1,794,872 + OH686_08810 0.64 -0.2 1,794,872 + OH686_08810 0.64 +0.1 1,794,873 - OH686_08810 0.65 +1.6 1,794,873 - OH686_08810 0.65 +0.0 1,794,873 - OH686_08810 0.65 -2.7 1,794,873 - OH686_08810 0.65 -0.1 1,794,873 - OH686_08810 0.65 -2.0 1,794,873 - OH686_08810 0.65 +0.8 1,794,873 - OH686_08810 0.65 -1.4 1,794,873 - OH686_08810 0.65 -0.1 1,794,873 - OH686_08810 0.65 +1.1 1,794,873 - OH686_08810 0.65 -0.7 1,794,873 - OH686_08810 0.65 +0.1 1,794,873 - OH686_08810 0.65 -0.3 1,794,873 - OH686_08810 0.65 -0.0 1,794,918 + OH686_08810 0.70 -1.0 1,795,077 + OH686_08810 0.88 +0.2 1,795,078 - OH686_08810 0.88 -0.3 1,795,078 - OH686_08810 0.88 -0.4 1,795,247 + +1.0 1,795,248 - -0.6 1,795,248 - -0.4 1,795,248 - +0.7 1,795,248 - +1.1
Or see this region's nucleotide sequence