Strain Fitness in Serratia liquefaciens MT49 around IAI46_23785

Experiment: Cadmium acetate 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cadmium acetate 40 uM, aerobic
5,056,188	+				+0.1
5,056,189	-				-1.5
5,056,189	-				+0.5
5,056,189	-				+0.3
5,056,240	-				-0.3
5,056,240	-				-2.2
5,056,242	+				+0.2
5,056,253	+				-1.3
5,056,253	+				-0.1
5,056,253	+				+0.0
5,056,265	+				-0.2
5,056,265	+				+1.1
5,056,265	+				+0.4
5,056,265	+				-0.4
5,056,266	-				+0.8
5,056,266	-				-1.3
5,056,328	+				-1.4
5,056,328	+				-0.1
5,056,329	-				-0.5
5,056,329	-				+0.2
5,056,332	-				+0.2
5,056,373	+				+0.1
5,056,374	-				+0.8
5,056,378	+				-0.2
5,056,405	+		IAI46_23775	0.14	-0.2
5,056,406	-		IAI46_23775	0.14	+0.9
5,056,486	+		IAI46_23775	0.45	-1.2
5,056,486	+		IAI46_23775	0.45	-0.2
5,056,627	+				-0.6
5,056,627	+				-0.1
5,056,628	-				+0.0
5,056,628	-				+0.1
5,056,643	-				+1.9
5,056,682	+		IAI46_23780	0.11	-0.9
5,056,682	+		IAI46_23780	0.11	-0.3
5,056,682	+		IAI46_23780	0.11	-0.0
5,056,683	-		IAI46_23780	0.11	+0.8
5,056,683	-		IAI46_23780	0.11	+0.0
5,056,683	-		IAI46_23780	0.11	-1.6
5,056,683	-		IAI46_23780	0.11	+0.8
5,056,684	+		IAI46_23780	0.12	-0.1
5,056,684	+		IAI46_23780	0.12	-0.3
5,056,684	+		IAI46_23780	0.12	+0.6
5,056,685	-		IAI46_23780	0.12	+1.0
5,056,685	-		IAI46_23780	0.12	-0.8
5,056,685	-		IAI46_23780	0.12	-2.2
5,056,727	+		IAI46_23780	0.21	-0.3
5,056,727	+		IAI46_23780	0.21	+0.3
5,056,728	-		IAI46_23780	0.21	-0.3
5,056,740	+		IAI46_23780	0.23	+0.0
5,056,741	-		IAI46_23780	0.24	-0.6
5,056,741	-		IAI46_23780	0.24	-0.5
5,056,741	-		IAI46_23780	0.24	+0.1
5,056,741	-		IAI46_23780	0.24	+1.0
5,056,741	-		IAI46_23780	0.24	+0.7
5,056,775	-		IAI46_23780	0.31	+0.4
5,056,864	+		IAI46_23780	0.49	+0.1
5,056,884	-		IAI46_23780	0.53	+0.6
5,056,967	+		IAI46_23780	0.71	+0.0
5,056,968	-		IAI46_23780	0.71	+0.4
5,056,968	-		IAI46_23780	0.71	-0.1
5,056,993	+		IAI46_23780	0.76	+0.0
5,057,081	+				+0.6
5,057,081	+				+0.2
5,057,084	+				+0.4
5,057,084	+				-0.8
5,057,085	-				+0.1
5,057,085	-				+0.1
5,057,085	-				+0.1
5,057,143	+				-1.1
5,057,144	-				+0.4
5,057,208	-				-1.3
5,057,208	-				-1.2
5,057,208	-				-0.6
5,057,208	-				-1.4
5,057,208	-				-1.4
5,057,209	+				-2.2
5,057,209	+				-1.7
5,057,279	+		IAI46_23785	0.10	-1.2
5,057,279	+		IAI46_23785	0.10	-2.8
5,057,280	-		IAI46_23785	0.10	-2.7
5,057,280	-		IAI46_23785	0.10	-1.2
5,057,280	-		IAI46_23785	0.10	-1.3
5,057,280	-		IAI46_23785	0.10	-2.4
5,057,280	-		IAI46_23785	0.10	-3.1
5,057,286	+		IAI46_23785	0.11	-0.7
5,057,287	-		IAI46_23785	0.11	-0.8
5,057,378	+		IAI46_23785	0.17	-2.0
5,057,483	+		IAI46_23785	0.25	-2.3
5,057,483	+		IAI46_23785	0.25	-1.3
5,057,484	-		IAI46_23785	0.25	-3.0
5,057,569	+		IAI46_23785	0.31	-1.9
5,057,570	-		IAI46_23785	0.31	-2.5
5,057,654	-		IAI46_23785	0.37	-1.6
5,057,660	+		IAI46_23785	0.38	-1.8
5,057,693	+		IAI46_23785	0.40	-2.4
5,057,694	-		IAI46_23785	0.40	-1.2
5,057,699	+		IAI46_23785	0.41	-1.1
5,057,700	-		IAI46_23785	0.41	-1.2
5,057,720	-		IAI46_23785	0.42	-3.0
5,057,890	+		IAI46_23785	0.55	-0.4
5,057,973	-		IAI46_23785	0.61	-2.8
5,057,997	+		IAI46_23785	0.62	-1.4
5,057,997	+		IAI46_23785	0.62	-2.0
5,057,997	+		IAI46_23785	0.62	-1.4
5,057,998	-		IAI46_23785	0.62	-2.3
5,057,998	-		IAI46_23785	0.62	-4.8
5,058,011	+		IAI46_23785	0.63	+0.1
5,058,012	-		IAI46_23785	0.63	-2.6
5,058,023	+		IAI46_23785	0.64	-2.9
5,058,024	-		IAI46_23785	0.64	-3.1
5,058,024	-		IAI46_23785	0.64	-2.4
5,058,024	-		IAI46_23785	0.64	-0.6
5,058,024	-		IAI46_23785	0.64	-1.0
5,058,200	-		IAI46_23785	0.77	-1.6
5,058,200	-		IAI46_23785	0.77	-0.4
5,058,311	+		IAI46_23785	0.85	-2.8
5,058,311	+		IAI46_23785	0.85	-1.4
5,058,311	+		IAI46_23785	0.85	-2.4
5,058,312	-		IAI46_23785	0.85	-2.5
5,058,347	+		IAI46_23785	0.88	-2.3
5,058,347	+		IAI46_23785	0.88	-1.5
5,058,358	+		IAI46_23785	0.89	-0.7
5,058,358	+		IAI46_23785	0.89	-3.4
5,058,372	-		IAI46_23785	0.90	-2.0
5,058,372	-		IAI46_23785	0.90	-2.0
5,058,372	-		IAI46_23785	0.90	-3.2
5,058,422	-				-3.2
5,058,462	+				-1.5
5,058,463	-				+2.2
5,058,463	-				+1.7
5,058,540	+				+0.3
5,058,541	-				-2.3
5,058,568	-				-1.7
5,058,648	+		IAI46_23790	0.19	-2.7
5,058,649	-		IAI46_23790	0.19	-2.2
5,058,755	-		IAI46_23790	0.34	-0.4
5,058,755	-		IAI46_23790	0.34	-2.0
5,058,805	+		IAI46_23790	0.41	-2.9
5,058,924	+		IAI46_23790	0.58	-1.4
5,058,925	-		IAI46_23790	0.58	-3.1
5,058,925	-		IAI46_23790	0.58	-0.7
5,058,925	-		IAI46_23790	0.58	-2.6
5,058,925	-		IAI46_23790	0.58	-2.2
5,058,988	+		IAI46_23790	0.67	-1.7
5,058,988	+		IAI46_23790	0.67	-2.1
5,058,988	+		IAI46_23790	0.67	-1.2
5,058,989	-		IAI46_23790	0.67	-1.2
5,059,127	+		IAI46_23790	0.86	-2.1
5,059,128	-		IAI46_23790	0.86	-0.9
5,059,158	-				-2.7
5,059,170	-				-0.9
5,059,231	+				-1.4
5,059,231	+				-0.0
5,059,231	+				+0.5
5,059,231	+				-2.4
5,059,232	-				-2.2
5,059,232	-				-3.8
5,059,232	-				-1.6
5,059,232	-				-1.8
5,059,234	+				+0.4
5,059,265	+				-2.4
5,059,265	+				-2.0
5,059,266	-				-0.5
5,059,266	-				+1.3
5,059,300	+				-1.4
5,059,306	+				-1.6
5,059,306	+				-0.6
5,059,307	-				+0.3
5,059,308	+				-0.1
5,059,308	+				-0.8
5,059,308	+				-0.0
5,059,308	+				+0.2
5,059,308	+				-0.2
5,059,309	-				+0.1
5,059,309	-				-1.0
5,059,309	-				-0.3
5,059,310	+				+0.4
5,059,310	+				-2.3
5,059,311	-				-0.3
5,059,311	-				+0.0
5,059,311	-				-0.3
5,059,311	-				+0.5
5,059,408	+				+0.1
5,059,408	+				-0.7
5,059,409	-				-0.2
5,059,414	-				-1.3
5,059,420	-				-1.1
5,059,473	+				+0.4
5,059,473	+				+1.0
5,059,473	+				+0.1
5,059,474	-				-0.1