Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23490 and IAI46_23495 are separated by 401 nucleotides IAI46_23495 and IAI46_23500 are separated by 370 nucleotides IAI46_23500 and IAI46_23505 are separated by 59 nucleotides
IAI46_23490: IAI46_23490 - transcriptional regulator, at 4,998,218 to 4,998,946
_23490
IAI46_23495: IAI46_23495 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 4,999,348 to 5,000,181
_23495
IAI46_23500: IAI46_23500 - SlyX family protein, at 5,000,552 to 5,000,779
_23500
IAI46_23505: IAI46_23505 - peptidylprolyl isomerase, at 5,000,839 to 5,001,435
_23505
Position (kb) 4999
5000
5001 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4998.369 kb on - strand, within IAI46_23490 at 4998.401 kb on - strand, within IAI46_23490 at 4998.413 kb on - strand, within IAI46_23490 at 4998.560 kb on - strand, within IAI46_23490 at 4998.560 kb on - strand, within IAI46_23490 at 4998.649 kb on - strand, within IAI46_23490 at 4998.695 kb on - strand, within IAI46_23490 at 4998.695 kb on - strand, within IAI46_23490 at 4998.695 kb on - strand, within IAI46_23490 at 4998.853 kb on - strand, within IAI46_23490 at 4998.930 kb on - strand at 4998.941 kb on - strand at 4998.941 kb on - strand at 4998.954 kb on - strand at 4999.040 kb on + strand at 4999.041 kb on - strand at 4999.061 kb on + strand at 4999.062 kb on - strand at 4999.062 kb on - strand at 4999.119 kb on - strand at 4999.123 kb on - strand at 4999.123 kb on - strand at 4999.153 kb on + strand at 4999.485 kb on + strand, within IAI46_23495 at 4999.610 kb on + strand, within IAI46_23495 at 4999.610 kb on + strand, within IAI46_23495 at 4999.617 kb on + strand, within IAI46_23495 at 4999.617 kb on + strand, within IAI46_23495 at 4999.658 kb on - strand, within IAI46_23495 at 4999.660 kb on + strand, within IAI46_23495 at 4999.660 kb on + strand, within IAI46_23495 at 4999.661 kb on - strand, within IAI46_23495 at 4999.661 kb on - strand, within IAI46_23495 at 4999.709 kb on - strand, within IAI46_23495 at 4999.715 kb on + strand, within IAI46_23495 at 4999.715 kb on + strand, within IAI46_23495 at 4999.716 kb on - strand, within IAI46_23495 at 4999.795 kb on - strand, within IAI46_23495 at 5000.016 kb on - strand, within IAI46_23495 at 5000.016 kb on - strand, within IAI46_23495 at 5000.094 kb on + strand, within IAI46_23495 at 5000.094 kb on + strand, within IAI46_23495 at 5000.167 kb on - strand at 5000.222 kb on + strand at 5000.223 kb on - strand at 5000.223 kb on - strand at 5000.226 kb on + strand at 5000.226 kb on + strand at 5000.226 kb on + strand at 5000.226 kb on + strand at 5000.227 kb on - strand at 5000.227 kb on - strand at 5000.243 kb on + strand at 5000.243 kb on + strand at 5000.243 kb on + strand at 5000.243 kb on + strand at 5000.243 kb on + strand at 5000.243 kb on + strand at 5000.244 kb on - strand at 5000.244 kb on - strand at 5000.244 kb on - strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.245 kb on + strand at 5000.246 kb on - strand at 5000.246 kb on - strand at 5000.246 kb on - strand at 5000.246 kb on - strand at 5000.246 kb on - strand at 5000.246 kb on - strand at 5000.246 kb on - strand at 5000.312 kb on + strand at 5000.313 kb on - strand at 5000.348 kb on + strand at 5000.348 kb on + strand at 5000.348 kb on + strand at 5000.384 kb on + strand at 5000.506 kb on + strand at 5000.512 kb on - strand at 5000.512 kb on - strand at 5000.512 kb on - strand at 5000.545 kb on + strand at 5000.545 kb on + strand at 5000.545 kb on + strand at 5000.545 kb on + strand at 5000.546 kb on - strand at 5000.546 kb on - strand at 5000.630 kb on - strand, within IAI46_23500 at 5000.780 kb on + strand at 5000.780 kb on + strand at 5000.780 kb on + strand at 5000.781 kb on - strand at 5001.009 kb on + strand, within IAI46_23505 at 5001.034 kb on + strand, within IAI46_23505 at 5001.035 kb on - strand, within IAI46_23505 at 5001.085 kb on + strand, within IAI46_23505 at 5001.085 kb on + strand, within IAI46_23505
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 4,998,369 - IAI46_23490 0.21 +0.6 4,998,401 - IAI46_23490 0.25 +0.2 4,998,413 - IAI46_23490 0.27 +0.6 4,998,560 - IAI46_23490 0.47 -0.8 4,998,560 - IAI46_23490 0.47 -0.0 4,998,649 - IAI46_23490 0.59 +0.1 4,998,695 - IAI46_23490 0.65 +1.0 4,998,695 - IAI46_23490 0.65 +0.4 4,998,695 - IAI46_23490 0.65 +0.7 4,998,853 - IAI46_23490 0.87 +0.2 4,998,930 - +0.5 4,998,941 - +0.8 4,998,941 - -0.6 4,998,954 - -0.3 4,999,040 + +0.4 4,999,041 - -0.4 4,999,061 + -0.1 4,999,062 - -0.1 4,999,062 - +0.7 4,999,119 - -1.8 4,999,123 - -0.0 4,999,123 - -0.1 4,999,153 + -0.4 4,999,485 + IAI46_23495 0.16 -0.5 4,999,610 + IAI46_23495 0.31 +1.8 4,999,610 + IAI46_23495 0.31 -0.2 4,999,617 + IAI46_23495 0.32 +0.1 4,999,617 + IAI46_23495 0.32 +1.2 4,999,658 - IAI46_23495 0.37 +1.1 4,999,660 + IAI46_23495 0.37 +1.0 4,999,660 + IAI46_23495 0.37 +0.5 4,999,661 - IAI46_23495 0.38 -0.4 4,999,661 - IAI46_23495 0.38 +0.4 4,999,709 - IAI46_23495 0.43 +0.9 4,999,715 + IAI46_23495 0.44 +0.7 4,999,715 + IAI46_23495 0.44 +1.6 4,999,716 - IAI46_23495 0.44 +0.1 4,999,795 - IAI46_23495 0.54 +0.9 5,000,016 - IAI46_23495 0.80 -1.0 5,000,016 - IAI46_23495 0.80 +0.6 5,000,094 + IAI46_23495 0.89 -0.2 5,000,094 + IAI46_23495 0.89 -1.1 5,000,167 - +0.4 5,000,222 + +1.1 5,000,223 - -1.2 5,000,223 - +0.5 5,000,226 + -0.1 5,000,226 + +0.9 5,000,226 + +0.2 5,000,226 + +0.5 5,000,227 - +0.5 5,000,227 - -2.5 5,000,243 + -0.4 5,000,243 + +0.1 5,000,243 + +0.2 5,000,243 + +0.6 5,000,243 + -0.0 5,000,243 + +0.3 5,000,244 - +0.0 5,000,244 - +1.1 5,000,244 - +0.8 5,000,245 + +0.2 5,000,245 + +0.2 5,000,245 + +0.5 5,000,245 + +0.7 5,000,245 + -0.3 5,000,245 + -0.9 5,000,245 + +0.4 5,000,245 + -0.2 5,000,245 + -0.1 5,000,245 + +0.5 5,000,245 + +0.2 5,000,246 - +0.4 5,000,246 - +0.8 5,000,246 - +0.4 5,000,246 - -0.2 5,000,246 - -0.2 5,000,246 - -0.2 5,000,246 - +0.3 5,000,312 + -0.2 5,000,313 - +0.4 5,000,348 + +0.8 5,000,348 + -0.3 5,000,348 + -0.9 5,000,384 + +0.1 5,000,506 + -0.2 5,000,512 - +0.0 5,000,512 - +0.9 5,000,512 - +1.1 5,000,545 + +0.1 5,000,545 + -0.6 5,000,545 + -0.0 5,000,545 + -0.2 5,000,546 - +0.7 5,000,546 - -0.4 5,000,630 - IAI46_23500 0.34 -0.9 5,000,780 + -0.1 5,000,780 + +1.0 5,000,780 + -0.3 5,000,781 - +1.2 5,001,009 + IAI46_23505 0.28 -0.3 5,001,034 + IAI46_23505 0.33 -0.6 5,001,035 - IAI46_23505 0.33 +1.6 5,001,085 + IAI46_23505 0.41 +0.8 5,001,085 + IAI46_23505 0.41 +0.4
Or see this region's nucleotide sequence