Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19720 and IAI46_19725 are separated by 477 nucleotides
IAI46_19720: IAI46_19720 - hypothetical protein, at 4,163,040 to 4,163,387
_19720
IAI46_19725: IAI46_19725 - hypothetical protein, at 4,163,865 to 4,164,917
_19725
Position (kb) 4163
4164
4165 Strain fitness (log2 ratio) -1
0
1
2 at 4162.871 kb on - strand at 4162.915 kb on - strand at 4163.003 kb on - strand at 4163.107 kb on - strand, within IAI46_19720 at 4163.155 kb on - strand, within IAI46_19720 at 4163.180 kb on + strand, within IAI46_19720 at 4163.181 kb on - strand, within IAI46_19720 at 4163.183 kb on + strand, within IAI46_19720 at 4163.183 kb on + strand, within IAI46_19720 at 4163.183 kb on + strand, within IAI46_19720 at 4163.238 kb on - strand, within IAI46_19720 at 4163.238 kb on - strand, within IAI46_19720 at 4163.318 kb on - strand, within IAI46_19720 at 4163.318 kb on - strand, within IAI46_19720 at 4163.339 kb on + strand, within IAI46_19720 at 4163.340 kb on - strand, within IAI46_19720 at 4163.413 kb on + strand at 4163.413 kb on + strand at 4163.414 kb on - strand at 4163.414 kb on - strand at 4163.429 kb on + strand at 4163.432 kb on + strand at 4163.433 kb on - strand at 4163.433 kb on - strand at 4163.433 kb on - strand at 4163.455 kb on + strand at 4163.494 kb on - strand at 4163.696 kb on - strand at 4163.710 kb on + strand at 4163.907 kb on - strand at 4164.052 kb on + strand, within IAI46_19725 at 4164.222 kb on + strand, within IAI46_19725 at 4164.353 kb on + strand, within IAI46_19725 at 4164.359 kb on + strand, within IAI46_19725 at 4164.369 kb on - strand, within IAI46_19725 at 4164.373 kb on - strand, within IAI46_19725 at 4164.730 kb on - strand, within IAI46_19725 at 4164.939 kb on + strand at 4164.940 kb on - strand at 4164.951 kb on + strand at 4165.001 kb on + strand at 4165.002 kb on - strand at 4165.040 kb on + strand at 4165.041 kb on - strand at 4165.087 kb on - strand at 4165.088 kb on + strand at 4165.128 kb on - strand at 4165.156 kb on + strand at 4165.157 kb on - strand at 4165.160 kb on - strand at 4165.177 kb on + strand at 4165.236 kb on + strand at 4165.238 kb on + strand at 4165.238 kb on + strand at 4165.238 kb on + strand at 4165.238 kb on + strand at 4165.239 kb on - strand at 4165.239 kb on - strand at 4165.239 kb on - strand at 4165.239 kb on - strand at 4165.242 kb on + strand at 4165.242 kb on + strand at 4165.244 kb on + strand at 4165.317 kb on + strand at 4165.318 kb on - strand at 4165.453 kb on - strand at 4165.593 kb on - strand at 4165.631 kb on + strand at 4165.631 kb on + strand at 4165.632 kb on - strand at 4165.632 kb on - strand at 4165.632 kb on - strand at 4165.632 kb on - strand at 4165.694 kb on - strand at 4165.694 kb on - strand at 4165.694 kb on - strand at 4165.699 kb on + strand at 4165.703 kb on + strand at 4165.742 kb on - strand at 4165.790 kb on - strand at 4165.802 kb on + strand at 4165.817 kb on + strand at 4165.818 kb on - strand at 4165.818 kb on - strand at 4165.858 kb on - strand at 4165.858 kb on - strand at 4165.858 kb on - strand at 4165.858 kb on - strand at 4165.858 kb on - strand at 4165.859 kb on + strand at 4165.859 kb on + strand at 4165.859 kb on + strand at 4165.859 kb on + strand at 4165.860 kb on - strand at 4165.860 kb on - strand at 4165.860 kb on - strand at 4165.860 kb on - strand at 4165.860 kb on - strand at 4165.862 kb on + strand at 4165.863 kb on - strand at 4165.880 kb on + strand at 4165.881 kb on - strand at 4165.881 kb on - strand at 4165.888 kb on - strand at 4165.888 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 4,162,871 - -0.2 4,162,915 - -0.2 4,163,003 - +0.9 4,163,107 - IAI46_19720 0.19 +0.1 4,163,155 - IAI46_19720 0.33 +0.2 4,163,180 + IAI46_19720 0.40 +0.2 4,163,181 - IAI46_19720 0.41 +0.5 4,163,183 + IAI46_19720 0.41 -0.2 4,163,183 + IAI46_19720 0.41 -0.3 4,163,183 + IAI46_19720 0.41 +1.6 4,163,238 - IAI46_19720 0.57 -0.0 4,163,238 - IAI46_19720 0.57 +0.8 4,163,318 - IAI46_19720 0.80 -0.6 4,163,318 - IAI46_19720 0.80 +0.3 4,163,339 + IAI46_19720 0.86 -0.0 4,163,340 - IAI46_19720 0.86 -0.6 4,163,413 + -1.3 4,163,413 + +0.0 4,163,414 - +0.6 4,163,414 - +0.1 4,163,429 + -0.5 4,163,432 + +0.7 4,163,433 - +0.2 4,163,433 - -0.2 4,163,433 - -0.0 4,163,455 + +1.3 4,163,494 - +1.1 4,163,696 - +0.9 4,163,710 + +0.9 4,163,907 - +0.4 4,164,052 + IAI46_19725 0.18 +0.1 4,164,222 + IAI46_19725 0.34 -0.3 4,164,353 + IAI46_19725 0.46 -0.3 4,164,359 + IAI46_19725 0.47 -0.9 4,164,369 - IAI46_19725 0.48 +0.3 4,164,373 - IAI46_19725 0.48 -1.4 4,164,730 - IAI46_19725 0.82 +0.5 4,164,939 + +0.7 4,164,940 - +0.0 4,164,951 + +0.9 4,165,001 + +0.7 4,165,002 - -0.6 4,165,040 + -0.1 4,165,041 - +0.0 4,165,087 - +1.2 4,165,088 + +0.5 4,165,128 - +0.7 4,165,156 + -0.4 4,165,157 - +1.3 4,165,160 - +0.0 4,165,177 + +0.2 4,165,236 + +1.6 4,165,238 + -0.1 4,165,238 + +1.1 4,165,238 + -0.1 4,165,238 + +0.9 4,165,239 - +0.3 4,165,239 - +0.8 4,165,239 - +0.4 4,165,239 - +0.4 4,165,242 + +1.2 4,165,242 + +0.4 4,165,244 + -0.9 4,165,317 + -1.1 4,165,318 - -0.2 4,165,453 - +0.1 4,165,593 - +1.2 4,165,631 + -0.9 4,165,631 + -0.1 4,165,632 - +0.4 4,165,632 - -0.8 4,165,632 - -1.7 4,165,632 - +0.9 4,165,694 - +0.8 4,165,694 - +0.8 4,165,694 - -0.1 4,165,699 + +1.0 4,165,703 + +0.1 4,165,742 - +1.4 4,165,790 - -0.4 4,165,802 + +2.3 4,165,817 + -0.3 4,165,818 - +0.4 4,165,818 - -0.5 4,165,858 - -0.1 4,165,858 - +0.3 4,165,858 - +1.9 4,165,858 - -0.4 4,165,858 - -0.4 4,165,859 + +1.1 4,165,859 + -0.1 4,165,859 + +0.4 4,165,859 + +0.9 4,165,860 - -0.3 4,165,860 - -0.0 4,165,860 - +0.7 4,165,860 - +0.7 4,165,860 - +0.2 4,165,862 + -0.1 4,165,863 - +1.4 4,165,880 + +0.5 4,165,881 - +0.3 4,165,881 - +0.6 4,165,888 - +0.1 4,165,888 - +0.4
Or see this region's nucleotide sequence