Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19255 and IAI46_19260 are separated by 254 nucleotides IAI46_19260 and IAI46_19265 are separated by 11 nucleotides IAI46_19265 and IAI46_19270 are separated by 13 nucleotides
IAI46_19255: IAI46_19255 - ribosome biogenesis GTPase Der, at 4,063,728 to 4,065,215
_19255
IAI46_19260: IAI46_19260 - outer membrane protein assembly factor BamB, at 4,065,470 to 4,066,651
_19260
IAI46_19265: IAI46_19265 - YfgM family protein, at 4,066,663 to 4,067,283
_19265
IAI46_19270: IAI46_19270 - histidine--tRNA ligase, at 4,067,297 to 4,068,571
_19270
Position (kb)
4065
4066
4067 Strain fitness (log2 ratio)
-1
0
1
2 at 4065.283 kb on - strand at 4065.381 kb on - strand at 4065.389 kb on - strand at 4065.389 kb on - strand at 4065.389 kb on - strand at 4065.472 kb on - strand at 4065.560 kb on - strand at 4065.602 kb on - strand, within IAI46_19260 at 4065.652 kb on - strand, within IAI46_19260 at 4065.652 kb on - strand, within IAI46_19260 at 4065.760 kb on - strand, within IAI46_19260 at 4065.760 kb on - strand, within IAI46_19260 at 4065.760 kb on - strand, within IAI46_19260 at 4065.867 kb on - strand, within IAI46_19260 at 4065.874 kb on - strand, within IAI46_19260 at 4065.956 kb on - strand, within IAI46_19260 at 4065.993 kb on - strand, within IAI46_19260 at 4066.153 kb on + strand, within IAI46_19260 at 4066.154 kb on - strand, within IAI46_19260 at 4066.227 kb on - strand, within IAI46_19260 at 4066.227 kb on - strand, within IAI46_19260 at 4066.227 kb on - strand, within IAI46_19260 at 4066.281 kb on + strand, within IAI46_19260 at 4066.435 kb on - strand, within IAI46_19260 at 4066.474 kb on - strand, within IAI46_19260 at 4066.562 kb on - strand at 4066.678 kb on - strand at 4066.902 kb on + strand, within IAI46_19265 at 4066.903 kb on - strand, within IAI46_19265 at 4067.083 kb on - strand, within IAI46_19265 at 4067.115 kb on - strand, within IAI46_19265 at 4067.115 kb on - strand, within IAI46_19265 at 4067.272 kb on - strand at 4067.272 kb on - strand at 4067.274 kb on - strand at 4067.304 kb on - strand at 4067.304 kb on - strand at 4067.304 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 4,065,283 - -0.8 4,065,381 - +0.8 4,065,389 - +0.2 4,065,389 - -0.0 4,065,389 - -0.4 4,065,472 - -0.3 4,065,560 - +0.7 4,065,602 - IAI46_19260 0.11 +1.9 4,065,652 - IAI46_19260 0.15 -0.9 4,065,652 - IAI46_19260 0.15 -1.7 4,065,760 - IAI46_19260 0.25 -0.3 4,065,760 - IAI46_19260 0.25 -0.4 4,065,760 - IAI46_19260 0.25 +1.1 4,065,867 - IAI46_19260 0.34 +1.0 4,065,874 - IAI46_19260 0.34 -0.1 4,065,956 - IAI46_19260 0.41 -0.0 4,065,993 - IAI46_19260 0.44 -0.4 4,066,153 + IAI46_19260 0.58 -0.4 4,066,154 - IAI46_19260 0.58 +1.6 4,066,227 - IAI46_19260 0.64 +0.7 4,066,227 - IAI46_19260 0.64 -0.7 4,066,227 - IAI46_19260 0.64 +0.0 4,066,281 + IAI46_19260 0.69 -0.4 4,066,435 - IAI46_19260 0.82 -0.1 4,066,474 - IAI46_19260 0.85 +0.3 4,066,562 - +0.6 4,066,678 - +0.6 4,066,902 + IAI46_19265 0.38 -0.7 4,066,903 - IAI46_19265 0.39 -0.2 4,067,083 - IAI46_19265 0.68 -0.3 4,067,115 - IAI46_19265 0.73 +0.7 4,067,115 - IAI46_19265 0.73 -1.1 4,067,272 - +0.9 4,067,272 - -0.3 4,067,274 - +0.4 4,067,304 - +0.3 4,067,304 - +0.3 4,067,304 - -0.8
Or see this region's nucleotide sequence