Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10830 and IAI46_10835 are separated by 8 nucleotides IAI46_10835 and IAI46_10840 are separated by 65 nucleotides
IAI46_10830: IAI46_10830 - 2-aminoethylphosphonate--pyruvate transaminase, at 2,290,207 to 2,291,310
_10830
IAI46_10835: IAI46_10835 - phosphonoacetaldehyde hydrolase, at 2,291,319 to 2,292,128
_10835
IAI46_10840: IAI46_10840 - L-cystine transporter, at 2,292,194 to 2,293,585
_10840
Position (kb)
2291
2292
2293 Strain fitness (log2 ratio)
-1
0
1 at 2290.376 kb on - strand, within IAI46_10830 at 2290.425 kb on - strand, within IAI46_10830 at 2290.480 kb on + strand, within IAI46_10830 at 2290.498 kb on + strand, within IAI46_10830 at 2290.611 kb on + strand, within IAI46_10830 at 2290.765 kb on + strand, within IAI46_10830 at 2290.766 kb on - strand, within IAI46_10830 at 2290.786 kb on - strand, within IAI46_10830 at 2290.885 kb on + strand, within IAI46_10830 at 2290.885 kb on + strand, within IAI46_10830 at 2290.885 kb on + strand, within IAI46_10830 at 2290.885 kb on + strand, within IAI46_10830 at 2290.911 kb on + strand, within IAI46_10830 at 2290.912 kb on - strand, within IAI46_10830 at 2290.932 kb on + strand, within IAI46_10830 at 2291.159 kb on - strand, within IAI46_10830 at 2291.204 kb on + strand at 2291.411 kb on + strand, within IAI46_10835 at 2291.412 kb on - strand, within IAI46_10835 at 2291.680 kb on + strand, within IAI46_10835 at 2291.680 kb on + strand, within IAI46_10835 at 2291.680 kb on + strand, within IAI46_10835 at 2291.680 kb on + strand, within IAI46_10835 at 2292.060 kb on - strand at 2292.060 kb on - strand at 2292.233 kb on - strand at 2292.275 kb on - strand at 2292.287 kb on - strand at 2292.538 kb on - strand, within IAI46_10840 at 2292.569 kb on - strand, within IAI46_10840 at 2292.699 kb on - strand, within IAI46_10840 at 2292.699 kb on - strand, within IAI46_10840 at 2292.699 kb on - strand, within IAI46_10840 at 2292.784 kb on - strand, within IAI46_10840 at 2292.802 kb on + strand, within IAI46_10840 at 2292.829 kb on + strand, within IAI46_10840 at 2293.033 kb on + strand, within IAI46_10840 at 2293.034 kb on - strand, within IAI46_10840 at 2293.034 kb on - strand, within IAI46_10840 at 2293.126 kb on - strand, within IAI46_10840 at 2293.126 kb on - strand, within IAI46_10840 at 2293.126 kb on - strand, within IAI46_10840
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 2,290,376 - IAI46_10830 0.15 +1.0 2,290,425 - IAI46_10830 0.20 -0.5 2,290,480 + IAI46_10830 0.25 +1.2 2,290,498 + IAI46_10830 0.26 +1.2 2,290,611 + IAI46_10830 0.37 -0.8 2,290,765 + IAI46_10830 0.51 -0.6 2,290,766 - IAI46_10830 0.51 +0.3 2,290,786 - IAI46_10830 0.52 +0.4 2,290,885 + IAI46_10830 0.61 +1.3 2,290,885 + IAI46_10830 0.61 +1.4 2,290,885 + IAI46_10830 0.61 -0.6 2,290,885 + IAI46_10830 0.61 -0.5 2,290,911 + IAI46_10830 0.64 -0.3 2,290,912 - IAI46_10830 0.64 -0.3 2,290,932 + IAI46_10830 0.66 +1.0 2,291,159 - IAI46_10830 0.86 -0.6 2,291,204 + -0.0 2,291,411 + IAI46_10835 0.11 +0.6 2,291,412 - IAI46_10835 0.11 +0.3 2,291,680 + IAI46_10835 0.45 +0.1 2,291,680 + IAI46_10835 0.45 -0.6 2,291,680 + IAI46_10835 0.45 -0.1 2,291,680 + IAI46_10835 0.45 -0.1 2,292,060 - -0.1 2,292,060 - -0.1 2,292,233 - -0.1 2,292,275 - -0.0 2,292,287 - +0.6 2,292,538 - IAI46_10840 0.25 -0.5 2,292,569 - IAI46_10840 0.27 +0.5 2,292,699 - IAI46_10840 0.36 -0.1 2,292,699 - IAI46_10840 0.36 +0.2 2,292,699 - IAI46_10840 0.36 -0.1 2,292,784 - IAI46_10840 0.42 +1.4 2,292,802 + IAI46_10840 0.44 +0.8 2,292,829 + IAI46_10840 0.46 +0.1 2,293,033 + IAI46_10840 0.60 +1.2 2,293,034 - IAI46_10840 0.60 -0.6 2,293,034 - IAI46_10840 0.60 +0.5 2,293,126 - IAI46_10840 0.67 +1.6 2,293,126 - IAI46_10840 0.67 -1.4 2,293,126 - IAI46_10840 0.67 +0.1
Or see this region's nucleotide sequence