Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10800 and IAI46_10805 are separated by 99 nucleotides IAI46_10805 and IAI46_10810 are separated by 406 nucleotides
IAI46_10800: IAI46_10800 - carboxy terminal-processing peptidase, at 2,282,892 to 2,284,928
_10800
IAI46_10805: IAI46_10805 - DUF4260 domain-containing protein, at 2,285,028 to 2,285,411
_10805
IAI46_10810: IAI46_10810 - protease HtpX, at 2,285,818 to 2,286,696
_10810
Position (kb)
2285
2286 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2284.102 kb on + strand, within IAI46_10800 at 2284.147 kb on + strand, within IAI46_10800 at 2284.147 kb on + strand, within IAI46_10800 at 2284.203 kb on + strand, within IAI46_10800 at 2284.204 kb on - strand, within IAI46_10800 at 2284.360 kb on - strand, within IAI46_10800 at 2284.407 kb on + strand, within IAI46_10800 at 2284.408 kb on - strand, within IAI46_10800 at 2284.547 kb on + strand, within IAI46_10800 at 2284.547 kb on + strand, within IAI46_10800 at 2284.548 kb on - strand, within IAI46_10800 at 2284.551 kb on - strand, within IAI46_10800 at 2284.564 kb on - strand, within IAI46_10800 at 2284.674 kb on + strand, within IAI46_10800 at 2284.772 kb on + strand at 2285.038 kb on + strand at 2285.039 kb on - strand at 2285.059 kb on + strand at 2285.089 kb on + strand, within IAI46_10805 at 2285.089 kb on + strand, within IAI46_10805 at 2285.104 kb on + strand, within IAI46_10805 at 2285.104 kb on + strand, within IAI46_10805 at 2285.104 kb on + strand, within IAI46_10805 at 2285.105 kb on - strand, within IAI46_10805 at 2285.106 kb on + strand, within IAI46_10805 at 2285.106 kb on + strand, within IAI46_10805 at 2285.107 kb on - strand, within IAI46_10805 at 2285.121 kb on + strand, within IAI46_10805 at 2285.179 kb on - strand, within IAI46_10805 at 2285.183 kb on - strand, within IAI46_10805 at 2285.183 kb on - strand, within IAI46_10805 at 2285.183 kb on - strand, within IAI46_10805 at 2285.229 kb on + strand, within IAI46_10805 at 2285.229 kb on + strand, within IAI46_10805 at 2285.229 kb on + strand, within IAI46_10805 at 2285.230 kb on - strand, within IAI46_10805 at 2285.257 kb on + strand, within IAI46_10805 at 2285.443 kb on + strand at 2285.444 kb on - strand at 2285.496 kb on - strand at 2285.798 kb on + strand at 2285.817 kb on + strand at 2285.826 kb on + strand at 2285.828 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 2,284,102 + IAI46_10800 0.59 +0.9 2,284,147 + IAI46_10800 0.62 +1.9 2,284,147 + IAI46_10800 0.62 -0.1 2,284,203 + IAI46_10800 0.64 +1.4 2,284,204 - IAI46_10800 0.64 +0.6 2,284,360 - IAI46_10800 0.72 +0.3 2,284,407 + IAI46_10800 0.74 +2.1 2,284,408 - IAI46_10800 0.74 +1.9 2,284,547 + IAI46_10800 0.81 +0.5 2,284,547 + IAI46_10800 0.81 -0.4 2,284,548 - IAI46_10800 0.81 +1.0 2,284,551 - IAI46_10800 0.81 +0.5 2,284,564 - IAI46_10800 0.82 +0.6 2,284,674 + IAI46_10800 0.87 +1.1 2,284,772 + -0.4 2,285,038 + +0.2 2,285,039 - -0.6 2,285,059 + -1.1 2,285,089 + IAI46_10805 0.16 +0.5 2,285,089 + IAI46_10805 0.16 -0.9 2,285,104 + IAI46_10805 0.20 +0.9 2,285,104 + IAI46_10805 0.20 +0.8 2,285,104 + IAI46_10805 0.20 -0.3 2,285,105 - IAI46_10805 0.20 +0.1 2,285,106 + IAI46_10805 0.20 +1.2 2,285,106 + IAI46_10805 0.20 +0.3 2,285,107 - IAI46_10805 0.21 -0.0 2,285,121 + IAI46_10805 0.24 +0.1 2,285,179 - IAI46_10805 0.39 -0.5 2,285,183 - IAI46_10805 0.40 +0.7 2,285,183 - IAI46_10805 0.40 +0.5 2,285,183 - IAI46_10805 0.40 +1.1 2,285,229 + IAI46_10805 0.52 -0.1 2,285,229 + IAI46_10805 0.52 +0.5 2,285,229 + IAI46_10805 0.52 +1.0 2,285,230 - IAI46_10805 0.53 -0.3 2,285,257 + IAI46_10805 0.60 +0.7 2,285,443 + +0.0 2,285,444 - +0.9 2,285,496 - +0.4 2,285,798 + -2.3 2,285,817 + -2.7 2,285,826 + -2.0 2,285,828 + -0.9
Or see this region's nucleotide sequence