Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04755 and IAI46_04760 are separated by 256 nucleotides IAI46_04760 and IAI46_04765 are separated by 195 nucleotides
IAI46_04755: IAI46_04755 - fructokinase, at 1,019,022 to 1,019,930
_04755
IAI46_04760: IAI46_04760 - PRD domain-containing protein, at 1,020,187 to 1,021,029
_04760
IAI46_04765: IAI46_04765 - exonuclease subunit SbcC, at 1,021,225 to 1,024,476
_04765
Position (kb)
1020
1021
1022 Strain fitness (log2 ratio)
-1
0
1
2 at 1019.233 kb on - strand, within IAI46_04755 at 1019.233 kb on - strand, within IAI46_04755 at 1019.233 kb on - strand, within IAI46_04755 at 1019.233 kb on - strand, within IAI46_04755 at 1019.233 kb on - strand, within IAI46_04755 at 1019.408 kb on + strand, within IAI46_04755 at 1019.409 kb on - strand, within IAI46_04755 at 1019.550 kb on + strand, within IAI46_04755 at 1019.550 kb on + strand, within IAI46_04755 at 1019.550 kb on + strand, within IAI46_04755 at 1019.550 kb on + strand, within IAI46_04755 at 1019.551 kb on - strand, within IAI46_04755 at 1019.551 kb on - strand, within IAI46_04755 at 1019.551 kb on - strand, within IAI46_04755 at 1019.571 kb on - strand, within IAI46_04755 at 1019.582 kb on + strand, within IAI46_04755 at 1019.582 kb on + strand, within IAI46_04755 at 1019.744 kb on + strand, within IAI46_04755 at 1019.745 kb on - strand, within IAI46_04755 at 1019.780 kb on + strand, within IAI46_04755 at 1019.803 kb on - strand, within IAI46_04755 at 1019.897 kb on - strand at 1019.964 kb on + strand at 1019.964 kb on + strand at 1019.964 kb on + strand at 1019.979 kb on - strand at 1020.006 kb on - strand at 1020.006 kb on - strand at 1020.006 kb on - strand at 1020.009 kb on + strand at 1020.009 kb on + strand at 1020.010 kb on - strand at 1020.010 kb on - strand at 1020.014 kb on + strand at 1020.014 kb on + strand at 1020.014 kb on + strand at 1020.188 kb on + strand at 1020.188 kb on + strand at 1020.188 kb on + strand at 1020.188 kb on + strand at 1020.188 kb on + strand at 1020.188 kb on + strand at 1020.189 kb on - strand at 1020.344 kb on + strand, within IAI46_04760 at 1020.428 kb on + strand, within IAI46_04760 at 1020.428 kb on + strand, within IAI46_04760 at 1020.429 kb on - strand, within IAI46_04760 at 1020.429 kb on - strand, within IAI46_04760 at 1020.429 kb on - strand, within IAI46_04760 at 1020.429 kb on - strand, within IAI46_04760 at 1020.429 kb on - strand, within IAI46_04760 at 1020.429 kb on - strand, within IAI46_04760 at 1020.429 kb on - strand, within IAI46_04760 at 1020.478 kb on - strand, within IAI46_04760 at 1020.507 kb on + strand, within IAI46_04760 at 1020.507 kb on + strand, within IAI46_04760 at 1020.507 kb on + strand, within IAI46_04760 at 1020.508 kb on - strand, within IAI46_04760 at 1020.508 kb on - strand, within IAI46_04760 at 1020.748 kb on - strand, within IAI46_04760 at 1020.748 kb on - strand, within IAI46_04760 at 1020.749 kb on + strand, within IAI46_04760 at 1020.750 kb on - strand, within IAI46_04760 at 1020.750 kb on - strand, within IAI46_04760 at 1020.759 kb on + strand, within IAI46_04760 at 1020.759 kb on + strand, within IAI46_04760 at 1020.759 kb on + strand, within IAI46_04760 at 1020.760 kb on - strand, within IAI46_04760 at 1020.760 kb on - strand, within IAI46_04760 at 1020.852 kb on + strand, within IAI46_04760 at 1021.005 kb on + strand at 1021.008 kb on + strand at 1021.009 kb on - strand at 1021.025 kb on + strand at 1021.112 kb on - strand at 1021.112 kb on - strand at 1021.114 kb on - strand at 1021.118 kb on - strand at 1021.122 kb on + strand at 1021.122 kb on + strand at 1021.123 kb on - strand at 1021.140 kb on + strand at 1021.141 kb on - strand at 1021.148 kb on + strand at 1021.148 kb on + strand at 1021.149 kb on - strand at 1021.149 kb on - strand at 1021.226 kb on + strand at 1021.227 kb on - strand at 1021.227 kb on - strand at 1021.227 kb on - strand at 1021.287 kb on + strand at 1021.287 kb on + strand at 1021.411 kb on - strand at 1021.537 kb on + strand at 1021.646 kb on + strand, within IAI46_04765 at 1021.646 kb on + strand, within IAI46_04765 at 1021.683 kb on + strand, within IAI46_04765 at 1021.692 kb on + strand, within IAI46_04765 at 1021.727 kb on + strand, within IAI46_04765 at 1021.743 kb on - strand, within IAI46_04765
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 1,019,233 - IAI46_04755 0.23 +0.4 1,019,233 - IAI46_04755 0.23 -0.2 1,019,233 - IAI46_04755 0.23 +0.2 1,019,233 - IAI46_04755 0.23 +1.4 1,019,233 - IAI46_04755 0.23 +0.4 1,019,408 + IAI46_04755 0.42 +1.0 1,019,409 - IAI46_04755 0.43 +0.1 1,019,550 + IAI46_04755 0.58 +0.0 1,019,550 + IAI46_04755 0.58 -0.6 1,019,550 + IAI46_04755 0.58 +0.1 1,019,550 + IAI46_04755 0.58 +1.8 1,019,551 - IAI46_04755 0.58 +0.0 1,019,551 - IAI46_04755 0.58 +0.1 1,019,551 - IAI46_04755 0.58 -0.1 1,019,571 - IAI46_04755 0.60 +0.8 1,019,582 + IAI46_04755 0.62 +0.7 1,019,582 + IAI46_04755 0.62 -0.2 1,019,744 + IAI46_04755 0.79 +0.0 1,019,745 - IAI46_04755 0.80 +0.6 1,019,780 + IAI46_04755 0.83 +0.4 1,019,803 - IAI46_04755 0.86 +0.4 1,019,897 - -0.5 1,019,964 + +0.0 1,019,964 + -1.3 1,019,964 + -0.3 1,019,979 - +0.4 1,020,006 - -0.8 1,020,006 - +0.0 1,020,006 - +0.0 1,020,009 + -0.2 1,020,009 + +0.4 1,020,010 - +1.7 1,020,010 - -0.1 1,020,014 + -0.3 1,020,014 + +0.5 1,020,014 + +0.1 1,020,188 + +0.4 1,020,188 + -0.8 1,020,188 + +0.9 1,020,188 + -0.1 1,020,188 + -1.1 1,020,188 + -0.1 1,020,189 - -1.1 1,020,344 + IAI46_04760 0.19 -0.9 1,020,428 + IAI46_04760 0.29 +0.0 1,020,428 + IAI46_04760 0.29 +0.4 1,020,429 - IAI46_04760 0.29 -0.6 1,020,429 - IAI46_04760 0.29 -0.3 1,020,429 - IAI46_04760 0.29 +1.7 1,020,429 - IAI46_04760 0.29 +0.2 1,020,429 - IAI46_04760 0.29 +0.4 1,020,429 - IAI46_04760 0.29 +0.0 1,020,429 - IAI46_04760 0.29 +0.4 1,020,478 - IAI46_04760 0.35 -0.1 1,020,507 + IAI46_04760 0.38 +0.3 1,020,507 + IAI46_04760 0.38 +0.8 1,020,507 + IAI46_04760 0.38 +0.0 1,020,508 - IAI46_04760 0.38 -0.1 1,020,508 - IAI46_04760 0.38 +1.0 1,020,748 - IAI46_04760 0.67 -1.5 1,020,748 - IAI46_04760 0.67 +0.4 1,020,749 + IAI46_04760 0.67 -0.4 1,020,750 - IAI46_04760 0.67 +1.2 1,020,750 - IAI46_04760 0.67 +0.5 1,020,759 + IAI46_04760 0.68 -0.3 1,020,759 + IAI46_04760 0.68 -0.3 1,020,759 + IAI46_04760 0.68 +0.7 1,020,760 - IAI46_04760 0.68 -0.2 1,020,760 - IAI46_04760 0.68 -1.0 1,020,852 + IAI46_04760 0.79 -0.3 1,021,005 + -0.2 1,021,008 + +0.0 1,021,009 - -0.3 1,021,025 + -1.2 1,021,112 - -0.2 1,021,112 - -1.0 1,021,114 - -0.5 1,021,118 - +0.0 1,021,122 + +0.4 1,021,122 + +1.2 1,021,123 - +0.7 1,021,140 + +0.3 1,021,141 - +0.3 1,021,148 + +0.3 1,021,148 + +0.6 1,021,149 - +0.0 1,021,149 - +0.0 1,021,226 + -0.2 1,021,227 - -0.3 1,021,227 - -0.2 1,021,227 - -0.3 1,021,287 + -0.3 1,021,287 + +0.7 1,021,411 - +0.3 1,021,537 + +1.5 1,021,646 + IAI46_04765 0.13 +0.1 1,021,646 + IAI46_04765 0.13 -0.5 1,021,683 + IAI46_04765 0.14 +1.2 1,021,692 + IAI46_04765 0.14 +1.3 1,021,727 + IAI46_04765 0.15 +0.4 1,021,743 - IAI46_04765 0.16 +0.1
Or see this region's nucleotide sequence