Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03190 and IAI46_03195 are separated by 16 nucleotides IAI46_03195 and IAI46_03200 are separated by 184 nucleotides IAI46_03200 and IAI46_03205 overlap by 8 nucleotides
IAI46_03190: IAI46_03190 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 683,865 to 685,013
_03190
IAI46_03195: IAI46_03195 - carbamoyl-phosphate synthase large subunit, at 685,030 to 688,254
_03195
IAI46_03200: IAI46_03200 - glutathione-regulated potassium-efflux system oxidoreductase KefF, at 688,439 to 688,996
_03200
IAI46_03205: IAI46_03205 - glutathione-regulated potassium-efflux system protein KefC, at 688,989 to 690,842
_03205
Position (kb) 685
686
687
688
689 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 684.030 kb on - strand, within IAI46_03190 at 684.030 kb on - strand, within IAI46_03190 at 684.030 kb on - strand, within IAI46_03190 at 684.034 kb on - strand, within IAI46_03190 at 684.034 kb on - strand, within IAI46_03190 at 684.034 kb on - strand, within IAI46_03190 at 684.042 kb on - strand, within IAI46_03190 at 684.089 kb on - strand, within IAI46_03190 at 684.089 kb on - strand, within IAI46_03190 at 684.351 kb on - strand, within IAI46_03190 at 684.366 kb on + strand, within IAI46_03190 at 684.366 kb on + strand, within IAI46_03190 at 684.366 kb on + strand, within IAI46_03190 at 684.367 kb on - strand, within IAI46_03190 at 684.367 kb on - strand, within IAI46_03190 at 684.367 kb on - strand, within IAI46_03190 at 684.367 kb on - strand, within IAI46_03190 at 684.453 kb on + strand, within IAI46_03190 at 684.460 kb on - strand, within IAI46_03190 at 684.485 kb on + strand, within IAI46_03190 at 684.486 kb on - strand, within IAI46_03190 at 684.486 kb on - strand, within IAI46_03190 at 684.570 kb on - strand, within IAI46_03190 at 684.570 kb on - strand, within IAI46_03190 at 684.613 kb on - strand, within IAI46_03190 at 684.993 kb on + strand at 684.993 kb on + strand at 684.994 kb on - strand at 685.024 kb on + strand at 685.041 kb on + strand at 685.042 kb on - strand at 685.042 kb on - strand at 685.042 kb on - strand at 685.050 kb on - strand at 685.111 kb on + strand at 685.222 kb on + strand at 685.222 kb on + strand at 685.222 kb on + strand at 685.255 kb on - strand at 685.482 kb on + strand, within IAI46_03195 at 685.482 kb on + strand, within IAI46_03195 at 685.482 kb on + strand, within IAI46_03195 at 685.483 kb on - strand, within IAI46_03195 at 685.546 kb on - strand, within IAI46_03195 at 685.676 kb on - strand, within IAI46_03195 at 685.707 kb on + strand, within IAI46_03195 at 685.708 kb on - strand, within IAI46_03195 at 685.778 kb on + strand, within IAI46_03195 at 685.778 kb on + strand, within IAI46_03195 at 685.779 kb on - strand, within IAI46_03195 at 685.810 kb on + strand, within IAI46_03195 at 685.965 kb on + strand, within IAI46_03195 at 685.966 kb on - strand, within IAI46_03195 at 685.966 kb on - strand, within IAI46_03195 at 685.966 kb on - strand, within IAI46_03195 at 685.966 kb on - strand, within IAI46_03195 at 686.017 kb on + strand, within IAI46_03195 at 686.017 kb on + strand, within IAI46_03195 at 686.089 kb on + strand, within IAI46_03195 at 686.089 kb on + strand, within IAI46_03195 at 686.262 kb on + strand, within IAI46_03195 at 686.263 kb on - strand, within IAI46_03195 at 686.341 kb on + strand, within IAI46_03195 at 686.402 kb on + strand, within IAI46_03195 at 686.402 kb on + strand, within IAI46_03195 at 686.587 kb on + strand, within IAI46_03195 at 686.588 kb on - strand, within IAI46_03195 at 686.588 kb on - strand, within IAI46_03195 at 686.606 kb on - strand, within IAI46_03195 at 686.620 kb on - strand, within IAI46_03195 at 686.653 kb on + strand, within IAI46_03195 at 686.653 kb on + strand, within IAI46_03195 at 686.654 kb on - strand, within IAI46_03195 at 686.654 kb on - strand, within IAI46_03195 at 686.654 kb on - strand, within IAI46_03195 at 686.659 kb on + strand, within IAI46_03195 at 686.659 kb on + strand, within IAI46_03195 at 686.659 kb on + strand, within IAI46_03195 at 686.659 kb on + strand, within IAI46_03195 at 686.660 kb on - strand, within IAI46_03195 at 686.660 kb on - strand, within IAI46_03195 at 686.660 kb on - strand, within IAI46_03195 at 686.668 kb on + strand, within IAI46_03195 at 686.668 kb on + strand, within IAI46_03195 at 686.767 kb on + strand, within IAI46_03195 at 686.768 kb on - strand, within IAI46_03195 at 686.768 kb on - strand, within IAI46_03195 at 686.810 kb on - strand, within IAI46_03195 at 686.832 kb on + strand, within IAI46_03195 at 686.851 kb on - strand, within IAI46_03195 at 686.851 kb on - strand, within IAI46_03195 at 686.857 kb on + strand, within IAI46_03195 at 686.878 kb on + strand, within IAI46_03195 at 686.879 kb on - strand, within IAI46_03195 at 686.879 kb on - strand, within IAI46_03195 at 686.906 kb on + strand, within IAI46_03195 at 686.906 kb on + strand, within IAI46_03195 at 686.943 kb on + strand, within IAI46_03195 at 686.953 kb on + strand, within IAI46_03195 at 686.954 kb on - strand, within IAI46_03195 at 687.005 kb on + strand, within IAI46_03195 at 687.005 kb on + strand, within IAI46_03195 at 687.006 kb on - strand, within IAI46_03195 at 687.006 kb on - strand, within IAI46_03195 at 687.006 kb on - strand, within IAI46_03195 at 687.009 kb on + strand, within IAI46_03195 at 687.009 kb on + strand, within IAI46_03195 at 687.009 kb on + strand, within IAI46_03195 at 687.009 kb on + strand, within IAI46_03195 at 687.009 kb on + strand, within IAI46_03195 at 687.009 kb on + strand, within IAI46_03195 at 687.170 kb on + strand, within IAI46_03195 at 687.170 kb on + strand, within IAI46_03195 at 687.171 kb on - strand, within IAI46_03195 at 687.171 kb on - strand, within IAI46_03195 at 687.181 kb on + strand, within IAI46_03195 at 687.209 kb on + strand, within IAI46_03195 at 687.308 kb on + strand, within IAI46_03195 at 687.308 kb on + strand, within IAI46_03195 at 687.309 kb on - strand, within IAI46_03195 at 687.424 kb on + strand, within IAI46_03195 at 687.424 kb on + strand, within IAI46_03195 at 687.424 kb on + strand, within IAI46_03195 at 687.424 kb on + strand, within IAI46_03195 at 687.425 kb on - strand, within IAI46_03195 at 687.688 kb on + strand, within IAI46_03195 at 687.689 kb on - strand, within IAI46_03195 at 687.691 kb on + strand, within IAI46_03195 at 687.692 kb on - strand, within IAI46_03195 at 687.900 kb on - strand, within IAI46_03195 at 687.902 kb on + strand, within IAI46_03195 at 687.902 kb on + strand, within IAI46_03195 at 687.988 kb on - strand at 688.057 kb on + strand at 688.057 kb on + strand at 688.057 kb on + strand at 688.063 kb on + strand at 688.063 kb on + strand at 688.063 kb on + strand at 688.063 kb on + strand at 688.063 kb on + strand at 688.064 kb on - strand at 688.064 kb on - strand at 688.064 kb on - strand at 688.123 kb on - strand at 688.135 kb on + strand at 688.147 kb on + strand at 688.148 kb on - strand at 688.242 kb on + strand at 688.243 kb on - strand at 688.243 kb on - strand at 688.252 kb on + strand at 688.253 kb on - strand at 688.394 kb on + strand at 688.395 kb on - strand at 688.395 kb on - strand at 688.396 kb on + strand at 688.396 kb on + strand at 688.396 kb on + strand at 688.396 kb on + strand at 688.396 kb on + strand at 688.397 kb on - strand at 688.397 kb on - strand at 688.397 kb on - strand at 688.397 kb on - strand at 688.397 kb on - strand at 688.407 kb on + strand at 688.407 kb on + strand at 688.408 kb on - strand at 688.408 kb on - strand at 688.408 kb on - strand at 688.450 kb on + strand at 688.451 kb on - strand at 688.517 kb on - strand, within IAI46_03200 at 688.534 kb on - strand, within IAI46_03200 at 688.544 kb on + strand, within IAI46_03200 at 688.544 kb on + strand, within IAI46_03200 at 688.544 kb on + strand, within IAI46_03200 at 688.545 kb on - strand, within IAI46_03200 at 688.614 kb on + strand, within IAI46_03200 at 688.640 kb on + strand, within IAI46_03200 at 688.700 kb on + strand, within IAI46_03200 at 688.700 kb on + strand, within IAI46_03200 at 688.700 kb on + strand, within IAI46_03200 at 688.701 kb on - strand, within IAI46_03200 at 688.701 kb on - strand, within IAI46_03200 at 688.839 kb on - strand, within IAI46_03200 at 688.847 kb on - strand, within IAI46_03200 at 688.862 kb on + strand, within IAI46_03200 at 688.862 kb on + strand, within IAI46_03200 at 688.863 kb on - strand, within IAI46_03200 at 688.863 kb on - strand, within IAI46_03200 at 688.863 kb on - strand, within IAI46_03200 at 688.876 kb on + strand, within IAI46_03200 at 688.876 kb on + strand, within IAI46_03200 at 688.877 kb on - strand, within IAI46_03200 at 688.885 kb on + strand, within IAI46_03200 at 688.926 kb on - strand, within IAI46_03200 at 688.941 kb on + strand at 688.947 kb on - strand at 688.994 kb on + strand at 689.025 kb on + strand at 689.025 kb on + strand at 689.025 kb on + strand at 689.026 kb on - strand at 689.195 kb on + strand, within IAI46_03205 at 689.195 kb on + strand, within IAI46_03205 at 689.195 kb on + strand, within IAI46_03205 at 689.249 kb on - strand, within IAI46_03205
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 684,030 - IAI46_03190 0.14 -1.2 684,030 - IAI46_03190 0.14 -1.5 684,030 - IAI46_03190 0.14 -3.7 684,034 - IAI46_03190 0.15 -1.7 684,034 - IAI46_03190 0.15 -2.1 684,034 - IAI46_03190 0.15 -1.0 684,042 - IAI46_03190 0.15 -1.7 684,089 - IAI46_03190 0.19 -1.8 684,089 - IAI46_03190 0.19 -0.1 684,351 - IAI46_03190 0.42 -0.8 684,366 + IAI46_03190 0.44 -1.8 684,366 + IAI46_03190 0.44 -1.1 684,366 + IAI46_03190 0.44 -1.1 684,367 - IAI46_03190 0.44 -0.3 684,367 - IAI46_03190 0.44 -1.2 684,367 - IAI46_03190 0.44 -1.7 684,367 - IAI46_03190 0.44 -1.3 684,453 + IAI46_03190 0.51 -0.3 684,460 - IAI46_03190 0.52 -3.1 684,485 + IAI46_03190 0.54 -1.5 684,486 - IAI46_03190 0.54 -1.2 684,486 - IAI46_03190 0.54 -2.7 684,570 - IAI46_03190 0.61 -1.3 684,570 - IAI46_03190 0.61 -0.7 684,613 - IAI46_03190 0.65 -1.0 684,993 + -0.0 684,993 + +0.1 684,994 - +0.2 685,024 + -2.4 685,041 + -1.4 685,042 - -1.4 685,042 - -1.4 685,042 - -0.6 685,050 - -1.1 685,111 + -0.8 685,222 + -2.0 685,222 + -1.3 685,222 + -1.0 685,255 - -0.8 685,482 + IAI46_03195 0.14 -0.0 685,482 + IAI46_03195 0.14 -0.4 685,482 + IAI46_03195 0.14 -0.4 685,483 - IAI46_03195 0.14 -3.7 685,546 - IAI46_03195 0.16 -0.3 685,676 - IAI46_03195 0.20 -2.8 685,707 + IAI46_03195 0.21 -1.0 685,708 - IAI46_03195 0.21 -2.4 685,778 + IAI46_03195 0.23 -1.2 685,778 + IAI46_03195 0.23 -1.5 685,779 - IAI46_03195 0.23 -2.1 685,810 + IAI46_03195 0.24 +0.1 685,965 + IAI46_03195 0.29 -0.9 685,966 - IAI46_03195 0.29 -0.8 685,966 - IAI46_03195 0.29 -0.4 685,966 - IAI46_03195 0.29 +0.9 685,966 - IAI46_03195 0.29 -3.0 686,017 + IAI46_03195 0.31 -0.6 686,017 + IAI46_03195 0.31 -1.5 686,089 + IAI46_03195 0.33 -1.7 686,089 + IAI46_03195 0.33 -1.0 686,262 + IAI46_03195 0.38 -1.3 686,263 - IAI46_03195 0.38 -2.1 686,341 + IAI46_03195 0.41 -0.9 686,402 + IAI46_03195 0.43 -1.5 686,402 + IAI46_03195 0.43 -3.0 686,587 + IAI46_03195 0.48 -1.8 686,588 - IAI46_03195 0.48 -2.1 686,588 - IAI46_03195 0.48 +1.1 686,606 - IAI46_03195 0.49 -1.0 686,620 - IAI46_03195 0.49 -0.9 686,653 + IAI46_03195 0.50 -2.2 686,653 + IAI46_03195 0.50 -1.7 686,654 - IAI46_03195 0.50 -1.2 686,654 - IAI46_03195 0.50 -0.8 686,654 - IAI46_03195 0.50 -2.2 686,659 + IAI46_03195 0.51 -0.8 686,659 + IAI46_03195 0.51 -1.4 686,659 + IAI46_03195 0.51 -2.0 686,659 + IAI46_03195 0.51 -1.5 686,660 - IAI46_03195 0.51 -4.1 686,660 - IAI46_03195 0.51 -2.8 686,660 - IAI46_03195 0.51 -1.2 686,668 + IAI46_03195 0.51 -2.8 686,668 + IAI46_03195 0.51 +0.1 686,767 + IAI46_03195 0.54 -0.9 686,768 - IAI46_03195 0.54 -2.2 686,768 - IAI46_03195 0.54 -1.4 686,810 - IAI46_03195 0.55 -0.7 686,832 + IAI46_03195 0.56 -1.8 686,851 - IAI46_03195 0.56 -1.3 686,851 - IAI46_03195 0.56 -1.2 686,857 + IAI46_03195 0.57 -2.2 686,878 + IAI46_03195 0.57 -1.1 686,879 - IAI46_03195 0.57 -0.2 686,879 - IAI46_03195 0.57 -1.6 686,906 + IAI46_03195 0.58 -2.0 686,906 + IAI46_03195 0.58 -1.5 686,943 + IAI46_03195 0.59 -0.9 686,953 + IAI46_03195 0.60 -0.4 686,954 - IAI46_03195 0.60 +0.1 687,005 + IAI46_03195 0.61 -1.2 687,005 + IAI46_03195 0.61 -2.4 687,006 - IAI46_03195 0.61 -0.8 687,006 - IAI46_03195 0.61 -0.6 687,006 - IAI46_03195 0.61 -0.7 687,009 + IAI46_03195 0.61 -0.5 687,009 + IAI46_03195 0.61 -2.0 687,009 + IAI46_03195 0.61 -2.1 687,009 + IAI46_03195 0.61 +0.8 687,009 + IAI46_03195 0.61 -1.1 687,009 + IAI46_03195 0.61 -1.2 687,170 + IAI46_03195 0.66 -0.1 687,170 + IAI46_03195 0.66 -1.0 687,171 - IAI46_03195 0.66 -2.1 687,171 - IAI46_03195 0.66 -1.1 687,181 + IAI46_03195 0.67 -1.2 687,209 + IAI46_03195 0.68 -0.6 687,308 + IAI46_03195 0.71 +0.9 687,308 + IAI46_03195 0.71 -1.1 687,309 - IAI46_03195 0.71 +0.1 687,424 + IAI46_03195 0.74 -1.0 687,424 + IAI46_03195 0.74 -0.6 687,424 + IAI46_03195 0.74 -1.6 687,424 + IAI46_03195 0.74 -2.8 687,425 - IAI46_03195 0.74 -2.6 687,688 + IAI46_03195 0.82 -1.4 687,689 - IAI46_03195 0.82 +0.0 687,691 + IAI46_03195 0.83 -1.9 687,692 - IAI46_03195 0.83 -2.8 687,900 - IAI46_03195 0.89 -0.6 687,902 + IAI46_03195 0.89 -0.3 687,902 + IAI46_03195 0.89 -1.4 687,988 - +1.6 688,057 + -0.9 688,057 + -1.1 688,057 + -1.2 688,063 + -1.7 688,063 + -0.4 688,063 + -0.1 688,063 + -1.5 688,063 + -0.9 688,064 - -1.6 688,064 - -1.6 688,064 - -1.0 688,123 - -0.9 688,135 + -1.7 688,147 + +0.1 688,148 - -1.8 688,242 + +1.4 688,243 - -0.5 688,243 - +0.2 688,252 + -0.0 688,253 - +0.2 688,394 + +1.3 688,395 - +0.3 688,395 - +1.5 688,396 + +0.6 688,396 + +0.7 688,396 + -0.7 688,396 + +1.0 688,396 + +0.7 688,397 - -0.7 688,397 - +0.1 688,397 - -0.3 688,397 - +0.9 688,397 - -0.1 688,407 + -0.3 688,407 + +0.4 688,408 - -0.2 688,408 - +0.7 688,408 - +0.6 688,450 + +0.7 688,451 - -0.2 688,517 - IAI46_03200 0.14 -0.4 688,534 - IAI46_03200 0.17 +0.0 688,544 + IAI46_03200 0.19 -0.3 688,544 + IAI46_03200 0.19 -0.5 688,544 + IAI46_03200 0.19 +1.0 688,545 - IAI46_03200 0.19 +0.9 688,614 + IAI46_03200 0.31 +0.6 688,640 + IAI46_03200 0.36 -0.3 688,700 + IAI46_03200 0.47 -0.8 688,700 + IAI46_03200 0.47 +0.2 688,700 + IAI46_03200 0.47 -0.4 688,701 - IAI46_03200 0.47 +1.4 688,701 - IAI46_03200 0.47 +0.8 688,839 - IAI46_03200 0.72 -0.1 688,847 - IAI46_03200 0.73 -0.3 688,862 + IAI46_03200 0.76 +0.2 688,862 + IAI46_03200 0.76 +0.8 688,863 - IAI46_03200 0.76 +0.0 688,863 - IAI46_03200 0.76 +1.3 688,863 - IAI46_03200 0.76 +0.2 688,876 + IAI46_03200 0.78 -1.3 688,876 + IAI46_03200 0.78 +0.1 688,877 - IAI46_03200 0.78 -0.7 688,885 + IAI46_03200 0.80 -0.5 688,926 - IAI46_03200 0.87 -0.3 688,941 + +0.5 688,947 - -1.1 688,994 + -0.7 689,025 + -0.5 689,025 + +0.6 689,025 + +0.6 689,026 - -0.1 689,195 + IAI46_03205 0.11 -1.3 689,195 + IAI46_03205 0.11 +0.5 689,195 + IAI46_03205 0.11 +0.4 689,249 - IAI46_03205 0.14 -0.9
Or see this region's nucleotide sequence