Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03065 and IAI46_03070 are separated by 51 nucleotides IAI46_03070 and IAI46_03075 are separated by 324 nucleotides IAI46_03075 and IAI46_03080 are separated by 106 nucleotides
IAI46_03065: IAI46_03065 - MFS transporter, at 654,240 to 655,547
_03065
IAI46_03070: IAI46_03070 - acetate uptake transporter, at 655,599 to 656,198
_03070
IAI46_03075: IAI46_03075 - molecular chaperone DnaK, at 656,523 to 658,436
_03075
IAI46_03080: IAI46_03080 - molecular chaperone DnaJ, at 658,543 to 659,673
_03080
Position (kb) 656
657
658
659 Strain fitness (log2 ratio) -2
-1
0
1
2 at 655.539 kb on + strand at 655.539 kb on + strand at 655.540 kb on - strand at 655.545 kb on + strand at 655.601 kb on - strand at 655.601 kb on - strand at 655.617 kb on - strand at 655.623 kb on + strand at 655.623 kb on + strand at 655.623 kb on + strand at 655.623 kb on + strand at 655.624 kb on - strand at 655.624 kb on - strand at 655.624 kb on - strand at 655.624 kb on - strand at 655.694 kb on + strand, within IAI46_03070 at 655.695 kb on - strand, within IAI46_03070 at 655.702 kb on + strand, within IAI46_03070 at 655.703 kb on - strand, within IAI46_03070 at 655.736 kb on - strand, within IAI46_03070 at 655.894 kb on + strand, within IAI46_03070 at 655.895 kb on - strand, within IAI46_03070 at 655.992 kb on - strand, within IAI46_03070 at 655.992 kb on - strand, within IAI46_03070 at 656.012 kb on + strand, within IAI46_03070 at 656.026 kb on + strand, within IAI46_03070 at 656.045 kb on + strand, within IAI46_03070 at 656.045 kb on + strand, within IAI46_03070 at 656.045 kb on + strand, within IAI46_03070 at 656.046 kb on - strand, within IAI46_03070 at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.241 kb on - strand at 656.249 kb on - strand at 656.275 kb on - strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.304 kb on - strand at 656.304 kb on - strand at 656.304 kb on - strand at 656.304 kb on - strand at 656.387 kb on - strand at 656.387 kb on - strand at 656.387 kb on - strand at 656.475 kb on + strand at 658.280 kb on + strand at 658.421 kb on + strand at 658.533 kb on + strand at 659.275 kb on + strand, within IAI46_03080 at 659.332 kb on + strand, within IAI46_03080 at 659.333 kb on - strand, within IAI46_03080 at 659.350 kb on - strand, within IAI46_03080 at 659.350 kb on - strand, within IAI46_03080 at 659.350 kb on - strand, within IAI46_03080
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 655,539 + +0.5 655,539 + -0.6 655,540 - -1.2 655,545 + -0.0 655,601 - -0.5 655,601 - -1.5 655,617 - +0.1 655,623 + -0.2 655,623 + -0.4 655,623 + +0.6 655,623 + -0.7 655,624 - +0.1 655,624 - +0.3 655,624 - +0.4 655,624 - +0.3 655,694 + IAI46_03070 0.16 -0.4 655,695 - IAI46_03070 0.16 +0.5 655,702 + IAI46_03070 0.17 -1.5 655,703 - IAI46_03070 0.17 -0.4 655,736 - IAI46_03070 0.23 +0.8 655,894 + IAI46_03070 0.49 +0.9 655,895 - IAI46_03070 0.49 +0.2 655,992 - IAI46_03070 0.66 +0.3 655,992 - IAI46_03070 0.66 -0.9 656,012 + IAI46_03070 0.69 -0.0 656,026 + IAI46_03070 0.71 +0.5 656,045 + IAI46_03070 0.74 -2.1 656,045 + IAI46_03070 0.74 -0.3 656,045 + IAI46_03070 0.74 -0.1 656,046 - IAI46_03070 0.74 +0.6 656,198 + +0.3 656,198 + +0.4 656,198 + -0.6 656,198 + +0.1 656,198 + -0.0 656,198 + +0.2 656,198 + +0.9 656,198 + +0.0 656,198 + -0.3 656,198 + -0.7 656,199 - -0.2 656,199 - -0.3 656,199 - -0.7 656,199 - -0.7 656,199 - +0.0 656,199 - -0.3 656,199 - -0.2 656,199 - +0.2 656,199 - -0.4 656,199 - -0.0 656,199 - -0.6 656,199 - -0.1 656,199 - +0.3 656,199 - -0.1 656,199 - -0.2 656,241 - +1.2 656,249 - +0.0 656,275 - +1.2 656,303 + -0.6 656,303 + -0.1 656,303 + -0.1 656,303 + +0.1 656,303 + +0.1 656,303 + -0.3 656,304 - -0.4 656,304 - +0.5 656,304 - +1.2 656,304 - +0.2 656,387 - +1.5 656,387 - -0.2 656,387 - +0.6 656,475 + +0.2 658,280 + +2.2 658,421 + +0.7 658,533 + +2.3 659,275 + IAI46_03080 0.65 -1.4 659,332 + IAI46_03080 0.70 +1.0 659,333 - IAI46_03080 0.70 +1.7 659,350 - IAI46_03080 0.71 +0.6 659,350 - IAI46_03080 0.71 +1.2 659,350 - IAI46_03080 0.71 +1.8
Or see this region's nucleotide sequence