Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01195 and IAI46_01200 are separated by 398 nucleotides IAI46_01200 and IAI46_01205 are separated by 24 nucleotides IAI46_01205 and IAI46_01215 are separated by 198 nucleotides IAI46_01215 and IAI46_01220 are separated by 6 nucleotides IAI46_01220 and IAI46_01225 are separated by 109 nucleotides
IAI46_01195: IAI46_01195 - GNAT family N-acetyltransferase, at 266,847 to 267,395
_01195
IAI46_01200: IAI46_01200 - tRNA-Thr, at 267,794 to 267,869
_01200
IAI46_01205: IAI46_01205 - tRNA-Tyr, at 267,894 to 267,978
_01205
IAI46_01215: IAI46_01215 - tRNA-Gly, at 268,177 to 268,251
_01215
IAI46_01220: IAI46_01220 - tRNA-Thr, at 268,258 to 268,333
_01220
IAI46_01225: IAI46_01225 - elongation factor Tu, at 268,443 to 269,627
_01225
Position (kb) 268
269 Strain fitness (log2 ratio) -2
-1
0
1 at 267.259 kb on + strand, within IAI46_01195 at 267.259 kb on + strand, within IAI46_01195 at 267.259 kb on + strand, within IAI46_01195 at 267.259 kb on + strand, within IAI46_01195 at 267.259 kb on + strand, within IAI46_01195 at 267.259 kb on + strand, within IAI46_01195 at 267.421 kb on + strand at 267.437 kb on + strand at 267.437 kb on + strand at 267.437 kb on + strand at 267.438 kb on - strand at 267.494 kb on + strand at 267.495 kb on - strand at 267.495 kb on - strand at 267.495 kb on - strand at 267.495 kb on - strand at 267.495 kb on - strand at 267.507 kb on + strand at 267.507 kb on + strand at 267.507 kb on + strand at 267.507 kb on + strand at 267.507 kb on + strand at 267.508 kb on - strand at 267.508 kb on - strand at 267.508 kb on - strand at 267.611 kb on + strand at 267.612 kb on - strand at 267.612 kb on - strand at 267.612 kb on - strand at 267.612 kb on - strand at 267.630 kb on - strand at 267.630 kb on - strand at 267.674 kb on + strand at 267.735 kb on + strand at 267.735 kb on + strand at 267.736 kb on - strand at 267.736 kb on - strand at 267.756 kb on + strand at 267.756 kb on + strand at 267.774 kb on + strand at 267.829 kb on + strand, within IAI46_01200 at 267.829 kb on + strand, within IAI46_01200 at 267.836 kb on + strand, within IAI46_01200 at 267.882 kb on + strand at 267.882 kb on + strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.997 kb on + strand at 267.997 kb on + strand at 267.997 kb on + strand at 268.011 kb on + strand at 268.109 kb on + strand at 268.109 kb on + strand at 268.263 kb on + strand at 268.263 kb on + strand at 268.263 kb on + strand at 268.265 kb on + strand at 268.265 kb on + strand at 268.265 kb on + strand at 268.277 kb on + strand, within IAI46_01220 at 268.277 kb on + strand, within IAI46_01220 at 268.277 kb on + strand, within IAI46_01220 at 268.277 kb on + strand, within IAI46_01220 at 268.293 kb on + strand, within IAI46_01220 at 268.293 kb on + strand, within IAI46_01220 at 268.339 kb on + strand at 268.339 kb on + strand at 268.339 kb on + strand at 268.339 kb on + strand at 268.339 kb on + strand at 268.342 kb on + strand at 268.342 kb on + strand at 268.407 kb on + strand at 268.407 kb on + strand at 268.407 kb on + strand at 268.418 kb on + strand at 268.429 kb on + strand at 268.448 kb on + strand at 268.491 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 267,259 + IAI46_01195 0.75 +0.1 267,259 + IAI46_01195 0.75 +0.2 267,259 + IAI46_01195 0.75 +0.7 267,259 + IAI46_01195 0.75 -0.3 267,259 + IAI46_01195 0.75 -0.1 267,259 + IAI46_01195 0.75 +0.1 267,421 + +0.6 267,437 + +0.3 267,437 + +0.2 267,437 + -0.1 267,438 - +0.6 267,494 + +0.4 267,495 - +0.0 267,495 - +0.4 267,495 - +0.2 267,495 - +0.8 267,495 - +0.6 267,507 + +0.0 267,507 + +0.9 267,507 + -0.2 267,507 + +0.9 267,507 + -0.3 267,508 - +0.9 267,508 - -0.2 267,508 - +0.1 267,611 + +0.0 267,612 - -0.0 267,612 - -0.3 267,612 - -0.0 267,612 - +0.4 267,630 - -0.1 267,630 - +0.4 267,674 + +0.9 267,735 + -0.9 267,735 + -1.9 267,736 - +0.3 267,736 - +0.2 267,756 + +1.1 267,756 + +1.7 267,774 + +1.7 267,829 + IAI46_01200 0.46 +0.6 267,829 + IAI46_01200 0.46 -2.1 267,836 + IAI46_01200 0.55 +0.4 267,882 + -1.4 267,882 + -1.1 267,979 + -0.6 267,979 + -1.1 267,979 + -0.6 267,979 + -1.1 267,979 + +0.3 267,979 + -0.6 267,979 + -0.2 267,979 + -1.2 267,997 + -0.5 267,997 + -1.8 267,997 + +1.1 268,011 + -0.4 268,109 + -0.2 268,109 + +1.0 268,263 + +0.2 268,263 + +0.4 268,263 + +1.1 268,265 + +1.0 268,265 + +1.3 268,265 + -0.4 268,277 + IAI46_01220 0.25 +0.1 268,277 + IAI46_01220 0.25 +0.1 268,277 + IAI46_01220 0.25 -1.6 268,277 + IAI46_01220 0.25 -1.1 268,293 + IAI46_01220 0.46 -0.7 268,293 + IAI46_01220 0.46 -1.1 268,339 + -0.1 268,339 + -0.1 268,339 + -0.9 268,339 + -0.1 268,339 + +0.7 268,342 + -0.1 268,342 + -0.7 268,407 + -1.7 268,407 + +0.9 268,407 + +1.0 268,418 + +0.3 268,429 + -0.9 268,448 + -0.1 268,491 - +1.7
Or see this region's nucleotide sequence