Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_4752

Experiment: KB with Trimethoprim 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 15.6 ug/ml
5,628,067	-				+1.1
5,628,067	-				-0.2
5,628,170	+				+1.1
5,628,380	-		Psyr_4752	0.13	-0.5
5,628,380	-		Psyr_4752	0.13	+0.6
5,628,539	-		Psyr_4752	0.24	-0.8
5,628,547	+		Psyr_4752	0.25	-0.2
5,628,547	+		Psyr_4752	0.25	-1.2
5,628,547	+		Psyr_4752	0.25	-0.7
5,628,548	-		Psyr_4752	0.25	-1.7
5,628,550	+		Psyr_4752	0.25	+0.1
5,628,830	-		Psyr_4752	0.46	-0.7
5,629,021	+		Psyr_4752	0.60	-0.6
5,629,022	-		Psyr_4752	0.60	+0.8
5,629,034	+		Psyr_4752	0.61	-0.2
5,629,178	-		Psyr_4752	0.72	+0.7
5,629,360	+		Psyr_4752	0.85	-0.2
5,629,361	-		Psyr_4752	0.85	+1.7
5,629,501	+				+0.6
5,629,501	+				+0.5
5,629,502	-				-0.7
5,629,502	-				+1.1
5,629,502	-				-2.8
5,629,751	+		Psyr_4753	0.13	-0.4
5,630,287	-		Psyr_4753	0.49	-1.2
5,630,509	-		Psyr_4753	0.64	+0.1