Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2689

Experiment: KB with Trimethoprim 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 15.6 ug/ml
3,264,070	+				+0.4
3,264,089	+				+0.7
3,264,090	-				+1.9
3,264,090	-				+0.7
3,264,115	+				-0.0
3,264,222	-				+1.4
3,264,323	+				+0.7
3,264,324	-				+0.7
3,264,326	-				-0.4
3,264,326	-				-1.9
3,264,326	-				-0.1
3,264,326	-				-0.4
3,264,326	-				+0.3
3,264,332	+				-2.6
3,264,333	-				+0.1
3,264,389	+				-1.8
3,264,390	-				-0.5
3,264,486	-				-0.7
3,264,487	+				-2.9
3,264,489	+				-1.5
3,264,489	+				-3.1
3,264,489	+				-0.2
3,264,490	-				+0.3
3,264,490	-				+0.2
3,264,490	-				+1.4
3,264,490	-				-0.3
3,264,491	+				-2.6
3,264,491	+				-1.1
3,264,492	-				+1.1
3,264,492	-				+0.7
3,264,494	-				-0.4
3,264,494	-				-0.7
3,264,494	-				+1.2
3,264,733	-				+0.3
3,264,752	-				+0.7
3,264,801	+				+0.7
3,264,808	-				-0.1
3,264,851	+				-0.6
3,264,852	-				+1.3
3,264,856	+				-0.3
3,264,856	+				+0.1
3,264,928	+				-0.9
3,264,953	+				+1.5
3,264,953	+				-0.3
3,264,953	+				+1.1
3,264,954	-				-1.7
3,264,954	-				+0.6
3,264,954	-				-1.3
3,265,020	+				-1.0
3,265,021	-				+2.3
3,265,021	-				-0.5
3,265,234	+		Psyr_2689	0.18	+1.2
3,265,289	+		Psyr_2689	0.23	+0.6
3,265,289	+		Psyr_2689	0.23	+0.6
3,265,289	+		Psyr_2689	0.23	+0.2
3,265,367	-		Psyr_2689	0.30	+0.4
3,265,414	-		Psyr_2689	0.34	-1.6
3,265,414	-		Psyr_2689	0.34	+1.3
3,265,512	+		Psyr_2689	0.43	-0.0
3,265,643	+		Psyr_2689	0.54	+0.7
3,265,644	-		Psyr_2689	0.54	-0.0
3,265,644	-		Psyr_2689	0.54	+0.6
3,265,731	+		Psyr_2689	0.62	-2.4
3,265,731	+		Psyr_2689	0.62	-0.2
3,265,732	-		Psyr_2689	0.62	-0.9
3,265,748	+		Psyr_2689	0.63	-0.2
3,265,749	-		Psyr_2689	0.63	+0.7
3,266,019	+		Psyr_2689	0.87	-0.5
3,266,019	+		Psyr_2689	0.87	-1.4
3,266,019	+		Psyr_2689	0.87	+1.5
3,266,020	-		Psyr_2689	0.87	+0.7
3,266,044	+		Psyr_2689	0.89	+0.3
3,266,044	+		Psyr_2689	0.89	+0.3
3,266,044	+		Psyr_2689	0.89	-0.2
3,266,044	+		Psyr_2689	0.89	-0.3
3,266,045	-		Psyr_2689	0.89	+0.2
3,266,045	-		Psyr_2689	0.89	+2.0
3,266,213	+				+0.1
3,266,214	-				-0.0
3,266,396	+		Psyr_2690	0.22	+0.4
3,266,397	-		Psyr_2690	0.23	-1.0
3,266,798	+		Psyr_2690	0.62	+0.2
3,266,799	-		Psyr_2690	0.62	+0.7
3,267,059	+		Psyr_2690	0.88	-0.2
3,267,060	-		Psyr_2690	0.88	+1.1
3,267,060	-		Psyr_2690	0.88	+0.4
3,267,150	+				-0.7
3,267,158	+				-0.3
3,267,159	-				+1.4
3,267,159	-				+1.0
3,267,159	-				-0.3
3,267,159	-				+0.5
3,267,160	+				-1.4
3,267,160	+				+0.3
3,267,161	-				-1.1
3,267,161	-				-0.0
3,267,161	-				+0.4