Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2470

Experiment: KB with Trimethoprim 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 15.6 ug/ml
2,862,391	-		Psyr_2469	0.46	-0.1
2,862,837	+		Psyr_2469	0.74	-0.3
2,862,838	-		Psyr_2469	0.74	-0.6
2,863,016	+		Psyr_2469	0.85	-0.6
2,863,016	+		Psyr_2469	0.85	+1.1
2,863,016	+		Psyr_2469	0.85	+0.1
2,863,016	+		Psyr_2469	0.85	+0.2
2,863,016	+		Psyr_2469	0.85	-0.7
2,863,017	-		Psyr_2469	0.85	+0.7
2,863,017	-		Psyr_2469	0.85	-1.7
2,863,017	-		Psyr_2469	0.85	+1.1
2,863,017	-		Psyr_2469	0.85	-0.5
2,863,393	+		Psyr_2470	0.10	-0.5
2,863,393	+		Psyr_2470	0.10	-0.7
2,863,456	+		Psyr_2470	0.16	-1.3
2,863,555	+		Psyr_2470	0.24	-0.7
2,863,555	+		Psyr_2470	0.24	-0.2
2,863,555	+		Psyr_2470	0.24	+0.9
2,863,555	+		Psyr_2470	0.24	-0.9
2,863,556	-		Psyr_2470	0.24	+0.6
2,863,556	-		Psyr_2470	0.24	+1.0
2,863,556	-		Psyr_2470	0.24	-0.3
2,863,556	-		Psyr_2470	0.24	-1.8
2,863,556	-		Psyr_2470	0.24	-0.5
2,863,556	-		Psyr_2470	0.24	-0.9
2,863,556	-		Psyr_2470	0.24	+0.9
2,863,578	+		Psyr_2470	0.26	-0.7
2,863,578	+		Psyr_2470	0.26	+0.7
2,863,630	+		Psyr_2470	0.31	+2.7
2,863,631	-		Psyr_2470	0.31	-0.3
2,863,686	+		Psyr_2470	0.36	-2.5
2,863,915	+		Psyr_2470	0.55	-0.7
2,863,924	+		Psyr_2470	0.56	-1.2
2,863,924	+		Psyr_2470	0.56	+0.1
2,863,924	+		Psyr_2470	0.56	-0.3
2,863,924	+		Psyr_2470	0.56	+1.8
2,863,924	+		Psyr_2470	0.56	-0.1
2,863,924	+		Psyr_2470	0.56	-0.9
2,863,925	-		Psyr_2470	0.56	-0.1
2,863,925	-		Psyr_2470	0.56	-0.7
2,863,925	-		Psyr_2470	0.56	-0.1
2,863,925	-		Psyr_2470	0.56	+0.7
2,864,092	+		Psyr_2470	0.70	+1.8
2,864,271	+		Psyr_2470	0.86	+1.1
2,864,502	+				+1.4
2,864,504	+				+0.3
2,864,504	+				+0.5
2,864,504	+				+0.4
2,864,505	-				-1.2
2,864,505	-				+2.8
2,864,505	-				-1.9
2,864,505	-				+0.1
2,864,505	-				-2.1
2,864,505	-				-0.2
2,864,505	-				-1.1
2,864,505	-				-0.2
2,864,511	+				+0.7
2,864,512	-				+0.3
2,864,598	+				-1.7
2,864,598	+				+1.4
2,864,678	+				-1.7
2,864,678	+				-1.7
2,864,678	+				-2.9
2,864,678	+				-2.1
2,864,678	+				-2.5
2,864,905	-				+1.1
2,864,930	+				-1.7
2,864,930	+				-1.7
2,864,931	-				+0.0
2,864,956	+				-0.8
2,864,957	-				-0.0
2,864,957	-				+1.0
2,864,957	-				+0.4
2,864,957	-				+0.7
2,864,970	+				-1.1
2,865,005	-				-0.4
2,865,016	-				+0.1
2,865,016	-				-0.9
2,865,026	+				-0.5
2,865,027	-				+0.2
2,865,027	-				+1.7
2,865,027	-				-0.1
2,865,060	+				+0.2
2,865,162	+				-1.3
2,865,162	+				+0.2
2,865,163	-				+0.7
2,865,163	-				+0.4
2,865,213	-				+0.7
2,865,252	+				-0.1
2,865,341	+		Psyr_2471	0.14	+0.3
2,865,342	-		Psyr_2471	0.15	-0.3
2,865,342	-		Psyr_2471	0.15	+1.7