Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2469

Experiment: KB with Trimethoprim 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 15.6 ug/ml
2,860,675	-				+0.7
2,861,140	+		Psyr_2468	0.43	-1.3
2,861,348	-		Psyr_2468	0.67	-1.7
2,861,392	+		Psyr_2468	0.72	-0.8
2,861,392	+		Psyr_2468	0.72	+2.7
2,861,392	+		Psyr_2468	0.72	-0.4
2,861,393	-		Psyr_2468	0.72	-1.1
2,861,393	-		Psyr_2468	0.72	-0.7
2,861,496	+		Psyr_2468	0.84	-1.3
2,861,496	+		Psyr_2468	0.84	+0.3
2,861,496	+		Psyr_2468	0.84	-0.7
2,861,610	+				-0.7
2,861,610	+				+0.6
2,861,610	+				-0.4
2,861,677	+				-1.7
2,861,677	+				-0.3
2,861,784	+				-0.1
2,861,784	+				+0.4
2,861,784	+				+0.5
2,861,806	-				-1.4
2,861,957	+		Psyr_2469	0.19	+0.7
2,861,957	+		Psyr_2469	0.19	-1.2
2,861,958	-		Psyr_2469	0.19	+1.8
2,861,973	+		Psyr_2469	0.20	-0.9
2,862,105	+		Psyr_2469	0.28	-1.5
2,862,105	+		Psyr_2469	0.28	+1.7
2,862,105	+		Psyr_2469	0.28	-0.3
2,862,106	-		Psyr_2469	0.28	-0.8
2,862,391	-		Psyr_2469	0.46	-0.1
2,862,837	+		Psyr_2469	0.74	-0.3
2,862,838	-		Psyr_2469	0.74	-0.6
2,863,016	+		Psyr_2469	0.85	-0.6
2,863,016	+		Psyr_2469	0.85	+1.1
2,863,016	+		Psyr_2469	0.85	+0.1
2,863,016	+		Psyr_2469	0.85	+0.2
2,863,016	+		Psyr_2469	0.85	-0.7
2,863,017	-		Psyr_2469	0.85	+0.7
2,863,017	-		Psyr_2469	0.85	-1.7
2,863,017	-		Psyr_2469	0.85	+1.1
2,863,017	-		Psyr_2469	0.85	-0.5
2,863,393	+		Psyr_2470	0.10	-0.5
2,863,393	+		Psyr_2470	0.10	-0.7
2,863,456	+		Psyr_2470	0.16	-1.3
2,863,555	+		Psyr_2470	0.24	-0.7
2,863,555	+		Psyr_2470	0.24	-0.2
2,863,555	+		Psyr_2470	0.24	+0.9
2,863,555	+		Psyr_2470	0.24	-0.9
2,863,556	-		Psyr_2470	0.24	+0.6
2,863,556	-		Psyr_2470	0.24	+1.0
2,863,556	-		Psyr_2470	0.24	-0.3
2,863,556	-		Psyr_2470	0.24	-1.8
2,863,556	-		Psyr_2470	0.24	-0.5
2,863,556	-		Psyr_2470	0.24	-0.9
2,863,556	-		Psyr_2470	0.24	+0.9
2,863,578	+		Psyr_2470	0.26	-0.7
2,863,578	+		Psyr_2470	0.26	+0.7
2,863,630	+		Psyr_2470	0.31	+2.7
2,863,631	-		Psyr_2470	0.31	-0.3
2,863,686	+		Psyr_2470	0.36	-2.5
2,863,915	+		Psyr_2470	0.55	-0.7
2,863,924	+		Psyr_2470	0.56	-1.2
2,863,924	+		Psyr_2470	0.56	+0.1
2,863,924	+		Psyr_2470	0.56	-0.3
2,863,924	+		Psyr_2470	0.56	+1.8
2,863,924	+		Psyr_2470	0.56	-0.1
2,863,924	+		Psyr_2470	0.56	-0.9
2,863,925	-		Psyr_2470	0.56	-0.1
2,863,925	-		Psyr_2470	0.56	-0.7
2,863,925	-		Psyr_2470	0.56	-0.1
2,863,925	-		Psyr_2470	0.56	+0.7
2,864,092	+		Psyr_2470	0.70	+1.8