Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2467

Experiment: KB with Trimethoprim 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 15.6 ug/ml
2,857,836	+		Psyr_2465	0.79	+0.3
2,857,837	-		Psyr_2465	0.79	+0.1
2,857,845	+		Psyr_2465	0.79	-0.9
2,857,846	-		Psyr_2465	0.80	-1.1
2,857,869	+		Psyr_2465	0.82	-0.1
2,858,062	-				-0.6
2,858,710	+				+0.1
2,858,711	-				+0.2
2,858,711	-				-0.7
2,858,713	+				-0.5
2,858,713	+				+0.7
2,858,713	+				+0.4
2,858,714	-				+1.5
2,858,716	+				+0.2
2,858,717	-				-1.9
2,859,105	-		Psyr_2467	0.15	-1.3
2,859,105	-		Psyr_2467	0.15	-0.1
2,859,112	-		Psyr_2467	0.15	+0.7
2,859,191	-		Psyr_2467	0.19	+1.2
2,859,605	+		Psyr_2467	0.41	-0.1
2,859,680	+		Psyr_2467	0.44	+1.7
2,859,849	-		Psyr_2467	0.53	-0.4
2,860,149	-		Psyr_2467	0.68	+0.7
2,860,149	-		Psyr_2467	0.68	+2.7
2,860,149	-		Psyr_2467	0.68	+0.9
2,860,352	+		Psyr_2467	0.79	-0.5
2,860,575	-				-0.1
2,860,675	-				+0.7
2,861,140	+		Psyr_2468	0.43	-1.3
2,861,348	-		Psyr_2468	0.67	-1.7
2,861,392	+		Psyr_2468	0.72	-0.8
2,861,392	+		Psyr_2468	0.72	+2.7
2,861,392	+		Psyr_2468	0.72	-0.4
2,861,393	-		Psyr_2468	0.72	-1.1
2,861,393	-		Psyr_2468	0.72	-0.7
2,861,496	+		Psyr_2468	0.84	-1.3
2,861,496	+		Psyr_2468	0.84	+0.3
2,861,496	+		Psyr_2468	0.84	-0.7
2,861,610	+				-0.7
2,861,610	+				+0.6
2,861,610	+				-0.4
2,861,677	+				-1.7
2,861,677	+				-0.3