Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2429

Experiment: KB with Trimethoprim 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 15.6 ug/ml
2,810,132	-		Psyr_2428	0.59	+0.9
2,810,151	-		Psyr_2428	0.63	+0.4
2,810,153	+		Psyr_2428	0.64	-0.6
2,810,154	-		Psyr_2428	0.64	-0.2
2,810,320	+				-0.6
2,810,373	+				+0.1
2,810,373	+				+0.5
2,810,374	-				-1.5
2,810,416	+				-0.2
2,810,485	-				+0.5
2,810,491	-				+0.7
2,810,647	+				-0.3
2,810,654	+				+0.3
2,810,654	+				+1.4
2,810,655	-				-0.5
2,810,655	-				+1.0
2,810,713	-				+0.1
2,810,722	-				-0.3
2,810,722	-				+0.7
2,810,725	+				+0.4
2,810,726	-				+1.1
2,810,837	-				-0.8
2,810,837	-				-0.3
2,811,060	+				-0.7
2,811,061	-				-1.7
2,811,601	+		Psyr_2429	0.46	-0.4
2,811,616	-		Psyr_2429	0.47	+1.3
2,811,698	-		Psyr_2429	0.55	+0.8
2,811,698	-		Psyr_2429	0.55	+2.2
2,811,745	-		Psyr_2429	0.59	+1.8
2,811,747	+		Psyr_2429	0.59	+0.9
2,811,747	+		Psyr_2429	0.59	-0.8
2,811,748	-		Psyr_2429	0.60	-0.1
2,811,748	-		Psyr_2429	0.60	-0.5
2,811,837	+		Psyr_2429	0.68	+1.5
2,811,837	+		Psyr_2429	0.68	+0.2
2,811,838	-		Psyr_2429	0.68	-0.7
2,812,178	-				+1.0
2,812,205	+				-0.6
2,812,205	+				-0.3
2,812,205	+				+0.5
2,812,205	+				+0.3
2,812,206	-				-0.4
2,812,206	-				+0.1
2,812,256	+				+1.0
2,812,268	+				+0.7
2,812,319	+		Psyr_2430	0.13	-0.5
2,812,319	+		Psyr_2430	0.13	-0.5
2,812,320	-		Psyr_2430	0.13	-0.3
2,812,479	-		Psyr_2430	0.53	-1.7
2,812,570	+		Psyr_2430	0.76	+0.8
2,812,571	-		Psyr_2430	0.76	-0.4
2,812,571	-		Psyr_2430	0.76	-1.3
2,812,571	-		Psyr_2430	0.76	-1.6
2,812,571	-		Psyr_2430	0.76	-0.6
2,812,616	+		Psyr_2430	0.87	+0.2
2,812,617	-		Psyr_2430	0.88	+0.4
2,812,617	-		Psyr_2430	0.88	-3.0
2,812,666	-				-0.1
2,812,682	-				-1.9
2,812,701	+				+0.3
2,812,701	+				+0.1
2,812,701	+				+0.5
2,812,702	-				+0.7
2,812,702	-				+0.7
2,812,738	-				+0.0
2,812,762	-				-0.2
2,812,769	-				-1.7
2,812,870	+				+0.7
2,812,870	+				+0.3
2,812,871	-				+0.2
2,812,875	+				+1.0
2,812,924	+				+0.2
2,813,033	-				-0.1