Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2112

Experiment: KB with Trimethoprim 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 15.6 ug/ml
2,468,210	+		Psyr_2111	0.71	-0.6
2,468,211	-		Psyr_2111	0.71	+0.4
2,468,211	-		Psyr_2111	0.71	+0.2
2,468,392	+		Psyr_2111	0.84	+0.8
2,468,408	-		Psyr_2111	0.85	-1.3
2,468,453	-		Psyr_2111	0.88	-0.7
2,468,616	-				-0.2
2,468,694	+				+2.0
2,468,695	-				+0.2
2,468,724	+				+0.9
2,468,724	+				-0.9
2,468,724	+				-0.5
2,468,724	+				-0.3
2,468,724	+				-0.4
2,468,724	+				+0.2
2,468,724	+				-1.4
2,468,724	+				+3.5
2,468,724	+				+0.5
2,468,724	+				+0.0
2,468,724	+				+0.1
2,468,724	+				+1.0
2,468,724	+				+0.9
2,468,724	+				-1.3
2,468,725	-				+0.1
2,468,725	-				+1.2
2,468,725	-				-0.5
2,468,725	-				-0.8
2,468,725	-				-1.0
2,468,725	-				-2.5
2,468,725	-				-0.3
2,468,725	-				-1.1
2,468,725	-				-0.5
2,468,725	-				-0.3
2,468,725	-				-0.3
2,468,725	-				-0.3
2,468,725	-				-1.4
2,468,725	-				+0.5
2,468,726	+				+0.1
2,468,726	+				-1.0
2,468,726	+				-0.3
2,468,726	+				-1.3
2,468,726	+				-0.6
2,468,727	-				-0.3
2,468,727	-				-0.4
2,468,727	-				+0.2
2,468,727	-				-0.2
2,468,730	-				-0.1
2,468,757	-				-0.3
2,468,790	+				-0.4
2,468,790	+				+0.2
2,468,949	+				-0.5
2,468,950	-				-1.3
2,469,136	+		Psyr_2112	0.49	-0.3
2,469,370	+				-1.1
2,469,383	+				-0.9
2,469,479	+				+0.7
2,469,479	+				+0.6
2,469,480	-				+0.7
2,469,480	-				+0.7
2,469,480	-				+0.1
2,469,637	+				+0.0
2,469,637	+				+1.0
2,469,638	-				-1.0
2,469,638	-				-0.7
2,469,641	-				+1.6