Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1903

Experiment: KB with Trimethoprim 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 15.6 ug/ml
2,178,356	+		Psyr_1902	0.69	+1.6
2,178,357	-		Psyr_1902	0.70	+0.7
2,178,357	-		Psyr_1902	0.70	+0.5
2,178,357	-		Psyr_1902	0.70	+0.3
2,178,563	+				-1.8
2,178,567	+				+0.8
2,178,568	-				+0.4
2,178,580	+				+0.8
2,178,580	+				+0.3
2,178,581	-				-0.9
2,178,597	-				+1.1
2,178,697	-		Psyr_1903	0.13	-1.6
2,178,742	+		Psyr_1903	0.21	-3.2
2,178,742	+		Psyr_1903	0.21	-0.1
2,178,742	+		Psyr_1903	0.21	-0.3
2,178,742	+		Psyr_1903	0.21	-0.2
2,178,743	-		Psyr_1903	0.21	+0.3
2,179,194	+				-0.6
2,179,194	+				-0.2
2,179,194	+				-0.9
2,179,194	+				+1.1