Strain Fitness in Pseudomonas sp. S08-1 around OH686_10675

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
2,192,331	+		OH686_10665	0.75	-0.8
2,192,471	+				-0.5
2,192,471	+				+0.7
2,192,471	+				+1.6
2,192,472	-				+2.2
2,192,472	-				-0.7
2,192,472	-				-0.4
2,192,472	-				-1.4
2,192,514	+				+0.9
2,192,524	-				-1.0
2,192,524	-				+0.1
2,192,558	+				+1.7
2,192,558	+				+0.6
2,192,558	+				+0.5
2,192,558	+				-1.1
2,192,559	-				-1.0
2,192,559	-				-1.1
2,192,578	+				+0.4
2,192,578	+				+0.6
2,192,578	+				-0.0
2,192,578	+				-2.2
2,192,578	+				+1.0
2,192,578	+				+4.1
2,192,578	+				+1.1
2,192,578	+				+1.4
2,192,578	+				+1.1
2,192,578	+				-1.7
2,192,578	+				-2.3
2,192,578	+				-1.9
2,192,578	+				+0.7
2,192,579	-				-2.3
2,192,579	-				-0.9
2,192,579	-				-1.6
2,192,579	-				-0.9
2,192,579	-				+0.2
2,192,579	-				+1.7
2,192,579	-				-1.0
2,192,579	-				+4.2
2,192,579	-				+0.7
2,192,579	-				+2.3
2,192,579	-				+0.4
2,192,604	+				-1.6
2,192,605	-				+0.2
2,192,702	+		OH686_10670	0.14	+0.2
2,192,702	+		OH686_10670	0.14	-0.3
2,192,702	+		OH686_10670	0.14	-0.1
2,192,702	+		OH686_10670	0.14	-2.3
2,192,702	+		OH686_10670	0.14	-1.6
2,192,702	+		OH686_10670	0.14	-2.1
2,192,702	+		OH686_10670	0.14	-1.1
2,192,702	+		OH686_10670	0.14	+0.1
2,192,702	+		OH686_10670	0.14	-0.4
2,192,702	+		OH686_10670	0.14	+0.4
2,192,703	-		OH686_10670	0.14	+0.6
2,192,703	-		OH686_10670	0.14	+0.7
2,192,703	-		OH686_10670	0.14	-1.6
2,192,703	-		OH686_10670	0.14	-1.1
2,192,703	-		OH686_10670	0.14	+0.4
2,192,703	-		OH686_10670	0.14	-1.7
2,192,703	-		OH686_10670	0.14	-2.0
2,192,703	-		OH686_10670	0.14	+1.5
2,192,703	-		OH686_10670	0.14	-1.9
2,192,703	-		OH686_10670	0.14	+0.2
2,192,834	+		OH686_10670	0.44	+0.4
2,192,834	+		OH686_10670	0.44	-0.7
2,192,834	+		OH686_10670	0.44	-2.2
2,192,834	+		OH686_10670	0.44	-0.0
2,192,835	-		OH686_10670	0.44	-1.6
2,192,835	-		OH686_10670	0.44	+0.8
2,192,835	-		OH686_10670	0.44	+1.0
2,192,835	-		OH686_10670	0.44	+1.0
2,192,835	-		OH686_10670	0.44	+1.6
2,192,835	-		OH686_10670	0.44	-0.4
2,192,835	-		OH686_10670	0.44	+0.7
2,192,835	-		OH686_10670	0.44	-0.2
2,192,835	-		OH686_10670	0.44	-1.2
2,192,835	-		OH686_10670	0.44	+0.4
2,192,835	-		OH686_10670	0.44	+1.3
2,192,835	-		OH686_10670	0.44	-3.1
2,192,835	-		OH686_10670	0.44	-1.2
2,192,835	-		OH686_10670	0.44	+3.4
2,192,835	-		OH686_10670	0.44	-1.1
2,192,835	-		OH686_10670	0.44	-1.1
2,192,837	+		OH686_10670	0.44	-1.4
2,192,837	+		OH686_10670	0.44	-0.0
2,192,837	+		OH686_10670	0.44	-1.9
2,192,837	+		OH686_10670	0.44	-1.3
2,192,837	+		OH686_10670	0.44	-2.2
2,192,838	-		OH686_10670	0.45	+0.1
2,192,838	-		OH686_10670	0.45	-1.2
2,192,838	-		OH686_10670	0.45	-0.1
2,192,838	-		OH686_10670	0.45	-0.6
2,192,838	-		OH686_10670	0.45	-0.0
2,192,859	+		OH686_10670	0.49	+0.8
2,192,859	+		OH686_10670	0.49	-0.7
2,192,859	+		OH686_10670	0.49	+0.6
2,192,860	-		OH686_10670	0.49	-0.4
2,192,872	+		OH686_10670	0.52	-2.4
2,192,873	-		OH686_10670	0.52	+0.7
2,192,888	+		OH686_10670	0.56	+1.6
2,192,888	+		OH686_10670	0.56	-0.1
2,192,888	+		OH686_10670	0.56	-0.4
2,192,888	+		OH686_10670	0.56	-0.3
2,192,888	+		OH686_10670	0.56	+0.8
2,192,888	+		OH686_10670	0.56	-1.0
2,192,888	+		OH686_10670	0.56	+0.7
2,192,888	+		OH686_10670	0.56	-1.9
2,192,888	+		OH686_10670	0.56	+1.4
2,192,888	+		OH686_10670	0.56	-1.7
2,192,888	+		OH686_10670	0.56	-2.4
2,192,888	+		OH686_10670	0.56	+0.0
2,192,889	-		OH686_10670	0.56	+0.4
2,192,889	-		OH686_10670	0.56	+0.4
2,192,889	-		OH686_10670	0.56	-1.8
2,192,889	-		OH686_10670	0.56	-1.7
2,192,889	-		OH686_10670	0.56	+0.4
2,192,889	-		OH686_10670	0.56	+0.4
2,192,889	-		OH686_10670	0.56	+1.8
2,192,889	-		OH686_10670	0.56	+0.3
2,192,889	-		OH686_10670	0.56	-1.0
2,192,889	-		OH686_10670	0.56	+1.1
2,192,889	-		OH686_10670	0.56	-0.6
2,192,889	-		OH686_10670	0.56	-0.4
2,192,889	-		OH686_10670	0.56	+0.6
2,192,889	-		OH686_10670	0.56	+1.6
2,192,889	-		OH686_10670	0.56	-1.6
2,192,889	-		OH686_10670	0.56	-0.8
2,192,889	-		OH686_10670	0.56	-1.3
2,192,889	-		OH686_10670	0.56	+0.9
2,192,889	-		OH686_10670	0.56	-0.6
2,192,891	-		OH686_10670	0.56	+1.7
2,192,911	+		OH686_10670	0.61	-1.0
2,192,912	-		OH686_10670	0.61	-0.1
2,192,912	-		OH686_10670	0.61	-1.7
2,192,918	+		OH686_10670	0.62	+0.7
2,192,918	+		OH686_10670	0.62	-1.7
2,192,918	+		OH686_10670	0.62	-1.9
2,192,918	+		OH686_10670	0.62	-1.5
2,192,918	+		OH686_10670	0.62	-1.9
2,192,918	+		OH686_10670	0.62	+0.1
2,192,919	-		OH686_10670	0.63	-1.2
2,192,919	-		OH686_10670	0.63	+1.6
2,192,993	+		OH686_10670	0.79	-1.8
2,192,994	-		OH686_10670	0.79	+1.1
2,192,994	-		OH686_10670	0.79	+1.1
2,192,994	-		OH686_10670	0.79	-1.8
2,192,994	-		OH686_10670	0.79	-2.0
2,193,107	+				+0.4
2,193,107	+				-2.5
2,193,108	-				-0.6
2,193,152	+				-2.9
2,193,152	+				-1.0
2,193,152	+				+0.2
2,193,440	-		OH686_10675	0.53	-1.8
2,193,440	-		OH686_10675	0.53	-0.7
2,193,560	-		OH686_10675	0.77	+2.0
2,193,592	+		OH686_10675	0.84	-2.1
2,193,592	+		OH686_10675	0.84	-0.3
2,193,592	+		OH686_10675	0.84	+1.4
2,193,592	+		OH686_10675	0.84	-0.3
2,193,592	+		OH686_10675	0.84	-0.3
2,193,593	-		OH686_10675	0.84	-1.1
2,193,593	-		OH686_10675	0.84	+0.0
2,193,593	-		OH686_10675	0.84	-1.3
2,193,593	-		OH686_10675	0.84	-0.8
2,193,593	-		OH686_10675	0.84	-0.6
2,193,593	-		OH686_10675	0.84	-0.5
2,193,593	-		OH686_10675	0.84	+0.3
2,193,700	+				+0.1
2,193,700	+				-2.4
2,193,700	+				-0.8
2,193,700	+				-0.2
2,193,701	-				+1.1
2,193,701	-				-1.2
2,193,701	-				-1.2
2,193,719	+				+0.7
2,193,719	+				-1.0
2,193,719	+				+0.5
2,193,719	+				-0.0
2,193,720	-				-0.8
2,193,720	-				+0.9
2,193,763	+		OH686_10680	0.11	+0.8
2,193,763	+		OH686_10680	0.11	+0.4
2,193,763	+		OH686_10680	0.11	+0.8
2,193,763	+		OH686_10680	0.11	-0.9
2,193,763	+		OH686_10680	0.11	+2.3
2,193,763	+		OH686_10680	0.11	+0.1
2,193,763	+		OH686_10680	0.11	-0.4
2,193,763	+		OH686_10680	0.11	+0.6
2,193,763	+		OH686_10680	0.11	-0.2
2,193,763	+		OH686_10680	0.11	+2.7
2,193,763	+		OH686_10680	0.11	-0.5
2,193,763	+		OH686_10680	0.11	+1.7
2,193,764	-		OH686_10680	0.12	-0.6
2,193,764	-		OH686_10680	0.12	+0.5
2,193,764	-		OH686_10680	0.12	+0.6
2,193,764	-		OH686_10680	0.12	-1.3
2,193,764	-		OH686_10680	0.12	-1.4
2,193,764	-		OH686_10680	0.12	-0.7
2,193,764	-		OH686_10680	0.12	+1.6
2,193,764	-		OH686_10680	0.12	+1.3
2,193,764	-		OH686_10680	0.12	-1.2
2,193,764	-		OH686_10680	0.12	+0.2
2,193,764	-		OH686_10680	0.12	-2.2
2,193,764	-		OH686_10680	0.12	-0.4
2,193,764	-		OH686_10680	0.12	-2.8
2,193,765	+		OH686_10680	0.12	-1.2
2,193,765	+		OH686_10680	0.12	-0.9
2,193,765	+		OH686_10680	0.12	-2.2
2,193,765	+		OH686_10680	0.12	-1.3
2,193,765	+		OH686_10680	0.12	-0.3
2,193,765	+		OH686_10680	0.12	+0.0
2,193,765	+		OH686_10680	0.12	+1.2
2,193,765	+		OH686_10680	0.12	-0.4
2,193,766	-		OH686_10680	0.12	-1.0
2,193,766	-		OH686_10680	0.12	+0.4
2,193,766	-		OH686_10680	0.12	-0.1
2,193,766	-		OH686_10680	0.12	-0.7
2,193,766	-		OH686_10680	0.12	+0.7
2,193,820	-		OH686_10680	0.24	+1.5
2,193,897	+		OH686_10680	0.41	+0.1
2,193,958	+		OH686_10680	0.54	-1.1
2,193,959	-		OH686_10680	0.54	-1.5
2,194,050	+		OH686_10680	0.74	-0.8
2,194,050	+		OH686_10680	0.74	+2.0
2,194,050	+		OH686_10680	0.74	-0.4
2,194,051	-		OH686_10680	0.74	-2.5
2,194,051	-		OH686_10680	0.74	+1.7
2,194,051	-		OH686_10680	0.74	-3.2
2,194,080	+		OH686_10680	0.80	+0.4
2,194,080	+		OH686_10680	0.80	+0.8
2,194,080	+		OH686_10680	0.80	+0.0
2,194,081	-		OH686_10680	0.81	+1.7
2,194,081	-		OH686_10680	0.81	+0.2
2,194,081	-		OH686_10680	0.81	-2.0
2,194,081	-		OH686_10680	0.81	-1.3
2,194,081	-		OH686_10680	0.81	-0.5
2,194,084	-		OH686_10680	0.81	+2.4
2,194,084	-		OH686_10680	0.81	-0.3
2,194,084	-		OH686_10680	0.81	+0.8
2,194,084	-		OH686_10680	0.81	-2.2
2,194,119	+		OH686_10680	0.89	-1.6
2,194,167	+				+0.2
2,194,167	+				-0.9
2,194,167	+				+0.2
2,194,167	+				-1.2
2,194,168	-				-1.6
2,194,230	-				-1.3
2,194,230	-				-1.4
2,194,300	-				+1.4
2,194,330	-		OH686_10685	0.12	+1.1
2,194,449	+		OH686_10685	0.24	+0.4
2,194,449	+		OH686_10685	0.24	-1.1
2,194,449	+		OH686_10685	0.24	-1.2
2,194,450	-		OH686_10685	0.24	+1.0
2,194,450	-		OH686_10685	0.24	+1.2
2,194,450	-		OH686_10685	0.24	+1.7
2,194,450	-		OH686_10685	0.24	-2.2
2,194,450	-		OH686_10685	0.24	-3.0
2,194,452	+		OH686_10685	0.25	+0.5
2,194,452	+		OH686_10685	0.25	-2.0
2,194,452	+		OH686_10685	0.25	-1.0
2,194,452	+		OH686_10685	0.25	-1.9
2,194,452	+		OH686_10685	0.25	+0.9
2,194,452	+		OH686_10685	0.25	+1.5
2,194,452	+		OH686_10685	0.25	+0.1
2,194,452	+		OH686_10685	0.25	+1.0
2,194,452	+		OH686_10685	0.25	+0.2
2,194,452	+		OH686_10685	0.25	+0.7
2,194,453	-		OH686_10685	0.25	-3.2
2,194,453	-		OH686_10685	0.25	-0.1
2,194,453	-		OH686_10685	0.25	+0.1
2,194,453	-		OH686_10685	0.25	+0.6
2,194,453	-		OH686_10685	0.25	-1.3
2,194,453	-		OH686_10685	0.25	-1.9
2,194,453	-		OH686_10685	0.25	-0.0
2,194,453	-		OH686_10685	0.25	-1.0
2,194,453	-		OH686_10685	0.25	+1.8
2,194,453	-		OH686_10685	0.25	-0.2
2,194,453	-		OH686_10685	0.25	+0.1
2,194,553	+		OH686_10685	0.35	-1.4
2,194,553	+		OH686_10685	0.35	+0.9
2,194,554	-		OH686_10685	0.35	-0.2