Strain Fitness in Pseudomonas sp. S08-1 around OH686_08790

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,788,420	-		OH686_08780	0.36	-2.5
1,788,563	-		OH686_08780	0.57	-1.5
1,788,563	-		OH686_08780	0.57	+0.9
1,788,668	+		OH686_08780	0.73	+0.4
1,788,668	+		OH686_08780	0.73	-1.5
1,788,668	+		OH686_08780	0.73	-0.5
1,788,668	+		OH686_08780	0.73	-1.8
1,788,669	-		OH686_08780	0.73	+1.2
1,788,669	-		OH686_08780	0.73	-0.0
1,788,802	+				+1.6
1,788,802	+				-2.0
1,788,802	+				-0.5
1,788,802	+				+0.2
1,788,802	+				+0.8
1,788,802	+				-0.5
1,788,802	+				-0.3
1,788,802	+				-1.0
1,788,802	+				-0.1
1,788,802	+				-0.2
1,788,802	+				+1.5
1,788,802	+				-1.5
1,788,802	+				-1.7
1,788,802	+				-2.4
1,788,802	+				+0.5
1,788,803	-				-0.7
1,788,803	-				+0.5
1,788,803	-				-2.1
1,788,803	-				+0.8
1,788,803	-				-1.2
1,788,803	-				-1.5
1,788,803	-				-1.2
1,788,843	+				+0.5
1,788,843	+				-0.7
1,788,843	+				-1.2
1,788,843	+				-1.7
1,788,843	+				-0.2
1,788,843	+				-0.1
1,788,843	+				+1.8
1,788,843	+				-1.9
1,788,843	+				-0.6
1,788,844	-				-1.6
1,788,844	-				+0.4
1,788,844	-				-0.1
1,788,844	-				-1.2
1,788,844	-				-0.1
1,788,844	-				-1.2
1,788,844	-				+1.1
1,788,844	-				-1.5
1,788,844	-				-1.1
1,788,844	-				+1.0
1,788,844	-				+3.1
1,788,882	+				-2.3
1,788,882	+				-0.9
1,788,882	+				+1.2
1,788,883	-				+2.2
1,788,883	-				-0.5
1,788,883	-				-0.7
1,788,901	+				-0.7
1,788,901	+				+0.2
1,788,902	-				+0.7
1,788,902	-				+0.8
1,788,994	+		OH686_08785	0.17	+0.5
1,788,994	+		OH686_08785	0.17	-1.6
1,788,994	+		OH686_08785	0.17	+0.2
1,788,994	+		OH686_08785	0.17	+0.2
1,788,994	+		OH686_08785	0.17	-1.7
1,788,994	+		OH686_08785	0.17	+0.1
1,788,995	-		OH686_08785	0.17	+0.6
1,788,995	-		OH686_08785	0.17	+0.6
1,788,995	-		OH686_08785	0.17	-0.2
1,788,995	-		OH686_08785	0.17	-0.2
1,788,995	-		OH686_08785	0.17	+1.1
1,789,177	+		OH686_08785	0.59	-0.1
1,789,177	+		OH686_08785	0.59	-0.3
1,789,177	+		OH686_08785	0.59	-0.1
1,789,177	+		OH686_08785	0.59	+0.8
1,789,178	-		OH686_08785	0.60	+2.4
1,789,178	-		OH686_08785	0.60	+0.6
1,789,178	-		OH686_08785	0.60	-0.4
1,789,178	-		OH686_08785	0.60	+0.5
1,789,178	-		OH686_08785	0.60	-0.0
1,789,178	-		OH686_08785	0.60	-1.1
1,789,178	-		OH686_08785	0.60	-0.2
1,789,178	-		OH686_08785	0.60	+1.3
1,789,238	-		OH686_08785	0.73	+1.2
1,789,250	-		OH686_08785	0.76	-0.8
1,789,252	+		OH686_08785	0.77	+0.1
1,789,252	+		OH686_08785	0.77	+1.1
1,789,252	+		OH686_08785	0.77	-0.1
1,789,253	-		OH686_08785	0.77	+0.8
1,789,253	-		OH686_08785	0.77	-1.8
1,789,253	-		OH686_08785	0.77	+0.6
1,789,253	-		OH686_08785	0.77	+1.2
1,789,253	-		OH686_08785	0.77	-0.0
1,789,253	-		OH686_08785	0.77	-1.4
1,789,253	-		OH686_08785	0.77	-0.2
1,789,300	+		OH686_08785	0.88	+1.2
1,789,321	+				-0.8
1,789,322	-				-0.5
1,789,330	+				-0.2
1,789,330	+				-1.4
1,789,330	+				-1.7
1,789,330	+				-1.2
1,789,330	+				-0.8
1,789,330	+				-1.5
1,789,330	+				+1.2
1,789,330	+				+0.6
1,789,330	+				+0.7
1,789,331	-				+1.3
1,789,331	-				-0.6
1,789,331	-				+1.2
1,789,331	-				-1.8
1,789,331	-				+1.6
1,789,331	-				+0.5
1,789,331	-				-2.2
1,789,331	-				-0.8
1,789,331	-				+0.5
1,789,344	+				-0.6
1,789,345	-				-2.1
1,789,345	-				-0.3
1,789,384	-				-1.6
1,789,512	+		OH686_08790	0.16	+0.8
1,789,512	+		OH686_08790	0.16	-0.7
1,789,512	+		OH686_08790	0.16	-0.2
1,789,512	+		OH686_08790	0.16	+0.2
1,789,512	+		OH686_08790	0.16	+1.6
1,789,512	+		OH686_08790	0.16	-1.1
1,789,512	+		OH686_08790	0.16	-0.7
1,789,513	-		OH686_08790	0.16	-2.1
1,789,513	-		OH686_08790	0.16	-2.6
1,789,513	-		OH686_08790	0.16	-1.2
1,789,513	-		OH686_08790	0.16	+0.6
1,789,539	+		OH686_08790	0.19	-0.1
1,789,539	+		OH686_08790	0.19	-1.6
1,789,539	+		OH686_08790	0.19	-0.0
1,789,540	-		OH686_08790	0.20	-1.9
1,789,540	-		OH686_08790	0.20	+0.6
1,789,580	+		OH686_08790	0.25	+0.8
1,789,580	+		OH686_08790	0.25	-0.1
1,789,580	+		OH686_08790	0.25	-0.1
1,789,580	+		OH686_08790	0.25	+0.5
1,789,580	+		OH686_08790	0.25	-0.4
1,789,580	+		OH686_08790	0.25	-0.4
1,789,580	+		OH686_08790	0.25	-0.8
1,789,580	+		OH686_08790	0.25	-0.0
1,789,580	+		OH686_08790	0.25	-1.1
1,789,580	+		OH686_08790	0.25	-0.7
1,789,581	-		OH686_08790	0.25	-0.2
1,789,581	-		OH686_08790	0.25	+1.1
1,789,581	-		OH686_08790	0.25	-1.5
1,789,581	-		OH686_08790	0.25	-0.1
1,789,581	-		OH686_08790	0.25	+2.2
1,789,581	-		OH686_08790	0.25	-0.6
1,789,581	-		OH686_08790	0.25	-0.8
1,789,581	-		OH686_08790	0.25	-0.6
1,789,581	-		OH686_08790	0.25	-2.1
1,789,581	-		OH686_08790	0.25	+0.2
1,789,581	-		OH686_08790	0.25	-0.6
1,789,581	-		OH686_08790	0.25	-0.4
1,789,581	-		OH686_08790	0.25	-2.0
1,789,713	+		OH686_08790	0.43	-1.1
1,789,714	-		OH686_08790	0.43	+0.5
1,789,731	+		OH686_08790	0.46	-1.8
1,789,731	+		OH686_08790	0.46	-0.8
1,789,732	-		OH686_08790	0.46	+1.3
1,789,732	-		OH686_08790	0.46	+0.3
1,789,732	-		OH686_08790	0.46	-0.6
1,789,762	-		OH686_08790	0.50	+0.6
1,789,762	-		OH686_08790	0.50	+0.6
1,789,794	+		OH686_08790	0.54	-1.9
1,789,795	-		OH686_08790	0.54	-2.3
1,789,795	-		OH686_08790	0.54	-1.6
1,789,818	+		OH686_08790	0.58	+0.2
1,789,818	+		OH686_08790	0.58	+0.4
1,789,818	+		OH686_08790	0.58	+0.2
1,789,819	-		OH686_08790	0.58	-1.1
1,789,819	-		OH686_08790	0.58	-0.5
1,789,819	-		OH686_08790	0.58	+0.6
1,789,819	-		OH686_08790	0.58	-2.2
1,789,834	-		OH686_08790	0.60	-1.2
1,789,834	-		OH686_08790	0.60	+0.4
1,789,834	-		OH686_08790	0.60	+1.2
1,789,842	+		OH686_08790	0.61	-0.1
1,789,842	+		OH686_08790	0.61	-0.4
1,789,842	+		OH686_08790	0.61	-1.0
1,789,842	+		OH686_08790	0.61	-0.8
1,789,842	+		OH686_08790	0.61	+2.7
1,789,842	+		OH686_08790	0.61	+0.9
1,789,842	+		OH686_08790	0.61	-1.3
1,789,842	+		OH686_08790	0.61	-0.9
1,789,842	+		OH686_08790	0.61	-1.0
1,789,843	-		OH686_08790	0.61	+0.4
1,789,843	-		OH686_08790	0.61	+0.8
1,789,843	-		OH686_08790	0.61	-2.8
1,789,843	-		OH686_08790	0.61	-0.1
1,789,843	-		OH686_08790	0.61	-0.6
1,789,843	-		OH686_08790	0.61	-0.7
1,789,843	-		OH686_08790	0.61	+0.1
1,789,843	-		OH686_08790	0.61	-1.5
1,789,843	-		OH686_08790	0.61	-0.2
1,789,843	-		OH686_08790	0.61	-1.2
1,790,040	+		OH686_08790	0.88	+1.2
1,790,040	+		OH686_08790	0.88	-1.4
1,790,040	+		OH686_08790	0.88	-0.5
1,790,040	+		OH686_08790	0.88	+1.2
1,790,041	-		OH686_08790	0.88	-0.2
1,790,130	+				-0.8
1,790,130	+				+0.9
1,790,130	+				-0.4
1,790,131	-				-0.5
1,790,131	-				+0.4
1,790,131	-				+0.5
1,790,152	+				-0.8
1,790,153	-				+0.2
1,790,184	+				+0.2
1,790,184	+				-2.1
1,790,184	+				-1.7
1,790,184	+				+0.1
1,790,184	+				+1.3
1,790,184	+				+0.6
1,790,184	+				+0.6
1,790,184	+				-0.6
1,790,184	+				-0.5
1,790,185	-				+0.1
1,790,185	-				+2.3
1,790,185	-				-1.4
1,790,185	-				-1.7
1,790,185	-				+0.2
1,790,188	+				-2.3
1,790,188	+				+0.9
1,790,188	+				+1.5
1,790,188	+				-0.0
1,790,188	+				+0.4
1,790,188	+				-0.5
1,790,188	+				-0.3
1,790,188	+				-0.0
1,790,188	+				+1.6
1,790,188	+				+0.2
1,790,188	+				-1.9
1,790,188	+				-0.8
1,790,188	+				+0.3
1,790,188	+				-1.3
1,790,188	+				-0.0
1,790,188	+				+1.5
1,790,188	+				+1.8
1,790,188	+				-1.5
1,790,188	+				+0.6
1,790,188	+				+0.3
1,790,188	+				-2.0
1,790,188	+				+0.6
1,790,188	+				-0.0
1,790,188	+				+0.5
1,790,188	+				-0.6
1,790,188	+				+3.7
1,790,188	+				+0.4
1,790,188	+				-2.6
1,790,188	+				-1.9
1,790,188	+				+1.6
1,790,188	+				-0.5
1,790,188	+				+0.2
1,790,188	+				+1.2
1,790,188	+				+1.5
1,790,189	-				-0.8
1,790,189	-				-1.6
1,790,189	-				-0.3
1,790,189	-				-0.9
1,790,189	-				-0.7
1,790,189	-				-0.1
1,790,189	-				-2.3
1,790,189	-				-0.8
1,790,189	-				+1.6
1,790,189	-				-1.2
1,790,189	-				-0.4
1,790,189	-				-1.5
1,790,189	-				+2.2
1,790,189	-				-0.7
1,790,189	-				-2.9
1,790,189	-				+0.9
1,790,189	-				-1.0
1,790,189	-				-1.1
1,790,189	-				-1.9
1,790,189	-				-1.0
1,790,189	-				-2.2
1,790,189	-				+0.9
1,790,189	-				-1.4
1,790,189	-				-2.5
1,790,189	-				+1.9
1,790,189	-				+0.2
1,790,189	-				-0.1
1,790,189	-				-1.2
1,790,189	-				-1.3
1,790,189	-				-0.5
1,790,189	-				+0.8
1,790,189	-				-1.5
1,790,189	-				+1.2
1,790,189	-				-1.1
1,790,189	-				-2.0
1,790,189	-				-1.2
1,790,189	-				-0.5
1,790,216	+				-0.0
1,790,216	+				+1.0
1,790,217	-				-0.2
1,790,217	-				-0.7
1,790,217	-				+1.0
1,790,246	+				+1.2
1,790,246	+				-1.0
1,790,246	+				+1.8
1,790,246	+				+2.1
1,790,246	+				-1.9
1,790,247	-				-1.3
1,790,247	-				-0.6
1,790,247	-				-0.1
1,790,247	-				+1.3
1,790,247	-				-1.3
1,790,247	-				+0.3
1,790,481	-		OH686_08795	0.13	-0.1
1,790,495	+		OH686_08795	0.15	-1.3
1,790,495	+		OH686_08795	0.15	+0.1
1,790,496	-		OH686_08795	0.15	+0.7
1,790,585	+		OH686_08795	0.27	+1.8
1,790,586	-		OH686_08795	0.27	-2.7
1,790,612	+		OH686_08795	0.31	-0.9
1,790,612	+		OH686_08795	0.31	+1.2
1,790,612	+		OH686_08795	0.31	-2.2
1,790,612	+		OH686_08795	0.31	+0.5
1,790,613	-		OH686_08795	0.31	-0.3
1,790,613	-		OH686_08795	0.31	+1.2
1,790,613	-		OH686_08795	0.31	-1.7
1,790,613	-		OH686_08795	0.31	-1.1
1,790,613	-		OH686_08795	0.31	-1.8
1,790,613	-		OH686_08795	0.31	-0.3
1,790,613	-		OH686_08795	0.31	-1.6
1,790,613	-		OH686_08795	0.31	+0.5
1,790,613	-		OH686_08795	0.31	+0.4
1,790,682	+		OH686_08795	0.40	-0.9
1,790,683	+		OH686_08795	0.41	-1.2
1,790,683	+		OH686_08795	0.41	+0.1
1,790,683	+		OH686_08795	0.41	-1.3
1,790,684	-		OH686_08795	0.41	+1.2
1,790,684	-		OH686_08795	0.41	-0.5
1,790,687	+		OH686_08795	0.41	-0.1
1,790,687	+		OH686_08795	0.41	-2.1
1,790,687	+		OH686_08795	0.41	-0.1
1,790,687	+		OH686_08795	0.41	-0.5
1,790,687	+		OH686_08795	0.41	-0.6
1,790,687	+		OH686_08795	0.41	-1.3
1,790,687	+		OH686_08795	0.41	+0.1
1,790,687	+		OH686_08795	0.41	-1.7
1,790,687	+		OH686_08795	0.41	-0.4
1,790,688	-		OH686_08795	0.41	+0.5
1,790,688	-		OH686_08795	0.41	+0.2
1,790,688	-		OH686_08795	0.41	+1.3
1,790,688	-		OH686_08795	0.41	+1.0
1,790,688	-		OH686_08795	0.41	-0.7
1,790,688	-		OH686_08795	0.41	+0.8
1,790,688	-		OH686_08795	0.41	+0.5
1,790,729	+		OH686_08795	0.47	+1.0
1,790,729	+		OH686_08795	0.47	-0.7
1,790,729	+		OH686_08795	0.47	-1.2
1,790,729	+		OH686_08795	0.47	+1.0
1,790,729	+		OH686_08795	0.47	+0.1
1,790,729	+		OH686_08795	0.47	-0.8
1,790,730	-		OH686_08795	0.47	-1.0
1,790,730	-		OH686_08795	0.47	+0.5
1,790,804	+		OH686_08795	0.57	+0.8
1,790,804	+		OH686_08795	0.57	+0.5
1,790,810	+		OH686_08795	0.58	-0.9
1,790,810	+		OH686_08795	0.58	+1.0
1,790,811	-		OH686_08795	0.58	+0.5
1,790,811	-		OH686_08795	0.58	+0.2
1,790,811	-		OH686_08795	0.58	+0.8
1,790,921	+		OH686_08795	0.73	+0.8
1,790,921	+		OH686_08795	0.73	-0.4
1,790,921	+		OH686_08795	0.73	-1.0
1,790,922	-		OH686_08795	0.73	+1.2
1,790,934	-		OH686_08795	0.75	-1.1
1,790,934	-		OH686_08795	0.75	-0.4
1,791,119	+				+1.6
1,791,119	+				+0.3
1,791,119	+				-2.2
1,791,119	+				-1.0
1,791,119	+				+0.8
1,791,119	+				-0.2
1,791,120	-				+2.2
1,791,120	-				-0.8
1,791,120	-				-2.0
1,791,120	-				+0.6
1,791,120	-				+0.8