Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_02765 and OH686_02770 are separated by 11 nucleotides OH686_02770 and OH686_02775 overlap by 4 nucleotides OH686_02775 and OH686_02780 are separated by 4 nucleotides OH686_02780 and OH686_02785 are separated by 86 nucleotides
OH686_02765: OH686_02765 - flagellar biosynthetic protein FliQ, at 583,038 to 583,307
_02765
OH686_02770: OH686_02770 - flagellar biosynthetic protein FliP, at 583,319 to 584,074
_02770
OH686_02775: OH686_02775 - flagellar biosynthetic protein FliO, at 584,071 to 584,511
_02775
OH686_02780: OH686_02780 - Flagellar motor switch protein FliN, at 584,516 to 584,992
_02780
OH686_02785: OH686_02785 - flagellar motor switch protein FliM, at 585,079 to 586,050
_02785
Position (kb) 584
585 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7
8
9
10 at 583.081 kb on + strand, within OH686_02765 at 583.081 kb on + strand, within OH686_02765 at 583.081 kb on + strand, within OH686_02765 at 583.081 kb on + strand, within OH686_02765 at 583.081 kb on + strand, within OH686_02765 at 583.081 kb on + strand, within OH686_02765 at 583.081 kb on + strand, within OH686_02765 at 583.082 kb on - strand, within OH686_02765 at 583.082 kb on - strand, within OH686_02765 at 583.082 kb on - strand, within OH686_02765 at 583.082 kb on - strand, within OH686_02765 at 583.082 kb on - strand, within OH686_02765 at 583.082 kb on - strand, within OH686_02765 at 583.082 kb on - strand, within OH686_02765 at 583.082 kb on - strand, within OH686_02765 at 583.090 kb on - strand, within OH686_02765 at 583.090 kb on - strand, within OH686_02765 at 583.090 kb on - strand, within OH686_02765 at 583.090 kb on - strand, within OH686_02765 at 583.090 kb on - strand, within OH686_02765 at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.320 kb on + strand at 583.321 kb on - strand at 583.321 kb on - strand at 583.321 kb on - strand at 583.321 kb on - strand at 583.321 kb on - strand at 583.321 kb on - strand at 583.321 kb on - strand at 583.321 kb on - strand at 583.322 kb on + strand at 583.322 kb on + strand at 583.322 kb on + strand at 583.322 kb on + strand at 583.323 kb on - strand at 583.396 kb on + strand, within OH686_02770 at 583.396 kb on + strand, within OH686_02770 at 583.397 kb on - strand, within OH686_02770 at 583.397 kb on - strand, within OH686_02770 at 583.435 kb on + strand, within OH686_02770 at 583.435 kb on + strand, within OH686_02770 at 583.435 kb on + strand, within OH686_02770 at 583.435 kb on + strand, within OH686_02770 at 583.435 kb on + strand, within OH686_02770 at 583.435 kb on + strand, within OH686_02770 at 583.435 kb on + strand, within OH686_02770 at 583.436 kb on - strand, within OH686_02770 at 583.436 kb on - strand, within OH686_02770 at 583.713 kb on + strand, within OH686_02770 at 583.713 kb on + strand, within OH686_02770 at 583.713 kb on + strand, within OH686_02770 at 583.736 kb on - strand, within OH686_02770 at 583.947 kb on + strand, within OH686_02770 at 583.947 kb on + strand, within OH686_02770 at 583.948 kb on - strand, within OH686_02770 at 584.161 kb on + strand, within OH686_02775 at 584.161 kb on + strand, within OH686_02775 at 584.239 kb on + strand, within OH686_02775 at 584.239 kb on + strand, within OH686_02775 at 584.240 kb on - strand, within OH686_02775 at 584.240 kb on - strand, within OH686_02775 at 584.594 kb on + strand, within OH686_02780 at 584.594 kb on + strand, within OH686_02780 at 584.594 kb on + strand, within OH686_02780 at 584.595 kb on - strand, within OH686_02780 at 584.595 kb on - strand, within OH686_02780 at 584.595 kb on - strand, within OH686_02780 at 584.595 kb on - strand, within OH686_02780 at 584.595 kb on - strand, within OH686_02780 at 584.998 kb on + strand at 584.999 kb on - strand at 584.999 kb on - strand at 585.016 kb on - strand at 585.016 kb on - strand at 585.016 kb on - strand at 585.057 kb on - strand at 585.057 kb on - strand at 585.150 kb on + strand at 585.150 kb on + strand at 585.151 kb on - strand at 585.151 kb on - strand at 585.151 kb on - strand at 585.151 kb on - strand at 585.151 kb on - strand at 585.151 kb on - strand at 585.395 kb on + strand, within OH686_02785 at 585.395 kb on + strand, within OH686_02785 at 585.396 kb on - strand, within OH686_02785 at 585.396 kb on - strand, within OH686_02785 at 585.483 kb on + strand, within OH686_02785 at 585.484 kb on - strand, within OH686_02785
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 583,081 + OH686_02765 0.16 +0.9 583,081 + OH686_02765 0.16 +1.2 583,081 + OH686_02765 0.16 +4.9 583,081 + OH686_02765 0.16 +2.0 583,081 + OH686_02765 0.16 +1.2 583,081 + OH686_02765 0.16 +4.0 583,081 + OH686_02765 0.16 -0.6 583,082 - OH686_02765 0.16 +2.9 583,082 - OH686_02765 0.16 +1.2 583,082 - OH686_02765 0.16 +3.3 583,082 - OH686_02765 0.16 +3.2 583,082 - OH686_02765 0.16 +3.2 583,082 - OH686_02765 0.16 +1.2 583,082 - OH686_02765 0.16 +2.6 583,082 - OH686_02765 0.16 +1.8 583,090 - OH686_02765 0.19 +2.2 583,090 - OH686_02765 0.19 +3.8 583,090 - OH686_02765 0.19 +2.9 583,090 - OH686_02765 0.19 +5.1 583,090 - OH686_02765 0.19 +3.2 583,320 + -0.4 583,320 + +3.7 583,320 + +0.1 583,320 + +0.1 583,320 + +4.7 583,320 + +4.1 583,320 + -0.4 583,320 + +3.0 583,320 + +2.6 583,320 + +1.9 583,320 + +0.4 583,320 + +4.6 583,320 + +2.8 583,320 + +2.4 583,320 + -1.8 583,320 + +4.1 583,321 - -0.4 583,321 - +0.1 583,321 - -0.3 583,321 - -1.3 583,321 - +0.7 583,321 - -1.9 583,321 - -0.5 583,321 - +1.0 583,322 + +1.2 583,322 + -0.7 583,322 + +5.2 583,322 + +2.3 583,323 - +0.5 583,396 + OH686_02770 0.10 +2.3 583,396 + OH686_02770 0.10 -0.9 583,397 - OH686_02770 0.10 +3.1 583,397 - OH686_02770 0.10 +3.0 583,435 + OH686_02770 0.15 -1.6 583,435 + OH686_02770 0.15 -1.9 583,435 + OH686_02770 0.15 +4.5 583,435 + OH686_02770 0.15 +0.3 583,435 + OH686_02770 0.15 +2.0 583,435 + OH686_02770 0.15 +0.3 583,435 + OH686_02770 0.15 +4.5 583,436 - OH686_02770 0.15 +2.7 583,436 - OH686_02770 0.15 -0.4 583,713 + OH686_02770 0.52 -0.6 583,713 + OH686_02770 0.52 +1.2 583,713 + OH686_02770 0.52 +3.0 583,736 - OH686_02770 0.55 +3.2 583,947 + OH686_02770 0.83 +3.5 583,947 + OH686_02770 0.83 +1.2 583,948 - OH686_02770 0.83 -1.6 584,161 + OH686_02775 0.20 +3.8 584,161 + OH686_02775 0.20 +3.7 584,239 + OH686_02775 0.38 +2.6 584,239 + OH686_02775 0.38 +0.5 584,240 - OH686_02775 0.38 +2.3 584,240 - OH686_02775 0.38 +2.6 584,594 + OH686_02780 0.16 +4.5 584,594 + OH686_02780 0.16 +3.7 584,594 + OH686_02780 0.16 +6.0 584,595 - OH686_02780 0.17 +4.7 584,595 - OH686_02780 0.17 +3.7 584,595 - OH686_02780 0.17 +3.4 584,595 - OH686_02780 0.17 -0.4 584,595 - OH686_02780 0.17 +4.1 584,998 + +4.9 584,999 - +0.9 584,999 - +0.5 585,016 - -0.3 585,016 - +0.1 585,016 - -0.9 585,057 - -0.9 585,057 - -0.7 585,150 + +5.7 585,150 + +4.4 585,151 - +5.1 585,151 - -0.7 585,151 - +4.5 585,151 - +1.8 585,151 - +3.4 585,151 - +2.9 585,395 + OH686_02785 0.33 +5.9 585,395 + OH686_02785 0.33 +3.8 585,396 - OH686_02785 0.33 +3.8 585,396 - OH686_02785 0.33 +4.5 585,483 + OH686_02785 0.42 +10.7 585,484 - OH686_02785 0.42 +5.3
Or see this region's nucleotide sequence