Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_20860 and IAI46_20865 are separated by 549 nucleotides IAI46_20865 and IAI46_20870 are separated by 86 nucleotides
IAI46_20860: IAI46_20860 - glycine cleavage system aminomethyltransferase GcvT, at 4,415,536 to 4,416,633
_20860
IAI46_20865: IAI46_20865 - FAD-dependent 2-octaprenylphenol hydroxylase, at 4,417,183 to 4,418,385
_20865
IAI46_20870: IAI46_20870 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 4,418,472 to 4,419,650
_20870
Position (kb)
4417
4418
4419 Strain fitness (log2 ratio)
-2
-1
0
1 at 4416.239 kb on + strand, within IAI46_20860 at 4416.312 kb on - strand, within IAI46_20860 at 4416.380 kb on + strand, within IAI46_20860 at 4416.481 kb on - strand, within IAI46_20860 at 4416.499 kb on - strand, within IAI46_20860 at 4416.499 kb on - strand, within IAI46_20860 at 4416.545 kb on + strand at 4416.545 kb on + strand at 4416.611 kb on + strand at 4416.612 kb on - strand at 4416.665 kb on + strand at 4416.665 kb on + strand at 4416.666 kb on - strand at 4416.666 kb on - strand at 4416.683 kb on + strand at 4416.683 kb on + strand at 4416.684 kb on - strand at 4416.684 kb on - strand at 4416.684 kb on - strand at 4416.694 kb on - strand at 4416.792 kb on - strand at 4416.828 kb on - strand at 4416.881 kb on + strand at 4416.936 kb on + strand at 4416.937 kb on - strand at 4416.937 kb on - strand at 4416.937 kb on - strand at 4416.937 kb on - strand at 4417.055 kb on - strand at 4417.071 kb on + strand at 4417.072 kb on - strand at 4417.073 kb on + strand at 4417.073 kb on + strand at 4417.073 kb on + strand at 4417.075 kb on + strand at 4417.075 kb on + strand at 4417.075 kb on + strand at 4417.076 kb on - strand at 4417.076 kb on - strand at 4417.076 kb on - strand at 4417.094 kb on + strand at 4417.094 kb on + strand at 4417.094 kb on + strand at 4418.460 kb on - strand at 4418.466 kb on + strand at 4418.466 kb on + strand at 4418.467 kb on - strand at 4418.474 kb on - strand at 4418.482 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 4,416,239 + IAI46_20860 0.64 +0.5 4,416,312 - IAI46_20860 0.71 +1.5 4,416,380 + IAI46_20860 0.77 -2.0 4,416,481 - IAI46_20860 0.86 +0.7 4,416,499 - IAI46_20860 0.88 +0.2 4,416,499 - IAI46_20860 0.88 -0.1 4,416,545 + -1.1 4,416,545 + -0.9 4,416,611 + +1.2 4,416,612 - +0.6 4,416,665 + -0.4 4,416,665 + +0.7 4,416,666 - +0.6 4,416,666 - +0.9 4,416,683 + -0.8 4,416,683 + +0.2 4,416,684 - +0.1 4,416,684 - +0.3 4,416,684 - -1.4 4,416,694 - +0.1 4,416,792 - +0.3 4,416,828 - -0.3 4,416,881 + -1.6 4,416,936 + -2.0 4,416,937 - -0.0 4,416,937 - +0.7 4,416,937 - +0.7 4,416,937 - +0.2 4,417,055 - -0.5 4,417,071 + -0.1 4,417,072 - -1.5 4,417,073 + +0.9 4,417,073 + +0.2 4,417,073 + +0.3 4,417,075 + -1.6 4,417,075 + -1.5 4,417,075 + +0.2 4,417,076 - -0.0 4,417,076 - +0.1 4,417,076 - -1.4 4,417,094 + +1.2 4,417,094 + +0.5 4,417,094 + -0.2 4,418,460 - +0.1 4,418,466 + -0.3 4,418,466 + -0.1 4,418,467 - +0.8 4,418,474 - +0.1 4,418,482 - -0.1
Or see this region's nucleotide sequence