Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19090 and IAI46_19095 are separated by 358 nucleotides IAI46_19095 and IAI46_19100 are separated by 86 nucleotides IAI46_19100 and IAI46_19105 overlap by 4 nucleotides
IAI46_19090: IAI46_19090 - methyltransferase, at 4,026,779 to 4,027,813
_19090
IAI46_19095: IAI46_19095 - inhibitor of vertebrate lysozyme family protein, at 4,028,172 to 4,028,630
_19095
IAI46_19100: IAI46_19100 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 4,028,717 to 4,029,517
_19100
IAI46_19105: IAI46_19105 - hydroxyethylthiazole kinase, at 4,029,514 to 4,030,308
_19105
Position (kb) 4028
4029 Strain fitness (log2 ratio) -1
0
1 at 4027.175 kb on + strand, within IAI46_19090 at 4027.226 kb on + strand, within IAI46_19090 at 4027.262 kb on - strand, within IAI46_19090 at 4027.265 kb on + strand, within IAI46_19090 at 4027.265 kb on + strand, within IAI46_19090 at 4027.266 kb on - strand, within IAI46_19090 at 4027.273 kb on + strand, within IAI46_19090 at 4027.274 kb on - strand, within IAI46_19090 at 4027.274 kb on - strand, within IAI46_19090 at 4027.292 kb on - strand, within IAI46_19090 at 4027.294 kb on - strand, within IAI46_19090 at 4027.390 kb on - strand, within IAI46_19090 at 4027.497 kb on - strand, within IAI46_19090 at 4027.819 kb on + strand at 4027.821 kb on - strand at 4027.913 kb on - strand at 4027.951 kb on + strand at 4027.970 kb on + strand at 4028.045 kb on + strand at 4028.125 kb on + strand at 4028.252 kb on - strand, within IAI46_19095 at 4028.260 kb on + strand, within IAI46_19095 at 4028.291 kb on + strand, within IAI46_19095 at 4028.349 kb on + strand, within IAI46_19095 at 4028.350 kb on - strand, within IAI46_19095 at 4028.350 kb on - strand, within IAI46_19095 at 4028.355 kb on - strand, within IAI46_19095 at 4028.401 kb on + strand, within IAI46_19095 at 4028.401 kb on + strand, within IAI46_19095 at 4028.402 kb on - strand, within IAI46_19095 at 4028.402 kb on - strand, within IAI46_19095 at 4028.495 kb on + strand, within IAI46_19095 at 4028.495 kb on + strand, within IAI46_19095 at 4028.496 kb on - strand, within IAI46_19095 at 4028.685 kb on + strand at 4028.686 kb on - strand at 4028.718 kb on + strand at 4028.741 kb on + strand at 4028.802 kb on + strand, within IAI46_19100 at 4028.802 kb on + strand, within IAI46_19100 at 4028.803 kb on - strand, within IAI46_19100 at 4028.896 kb on + strand, within IAI46_19100 at 4029.229 kb on - strand, within IAI46_19100 at 4029.353 kb on + strand, within IAI46_19100 at 4029.353 kb on + strand, within IAI46_19100 at 4029.353 kb on + strand, within IAI46_19100 at 4029.353 kb on + strand, within IAI46_19100 at 4029.353 kb on + strand, within IAI46_19100 at 4029.353 kb on + strand, within IAI46_19100 at 4029.353 kb on + strand, within IAI46_19100 at 4029.353 kb on + strand, within IAI46_19100 at 4029.354 kb on - strand, within IAI46_19100 at 4029.354 kb on - strand, within IAI46_19100 at 4029.360 kb on + strand, within IAI46_19100 at 4029.360 kb on + strand, within IAI46_19100 at 4029.361 kb on - strand, within IAI46_19100 at 4029.421 kb on - strand, within IAI46_19100 at 4029.542 kb on + strand at 4029.542 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 4,027,175 + IAI46_19090 0.38 -0.4 4,027,226 + IAI46_19090 0.43 -0.3 4,027,262 - IAI46_19090 0.47 -0.0 4,027,265 + IAI46_19090 0.47 -0.6 4,027,265 + IAI46_19090 0.47 -0.8 4,027,266 - IAI46_19090 0.47 +1.1 4,027,273 + IAI46_19090 0.48 -0.6 4,027,274 - IAI46_19090 0.48 +0.4 4,027,274 - IAI46_19090 0.48 +0.1 4,027,292 - IAI46_19090 0.50 +0.7 4,027,294 - IAI46_19090 0.50 -1.1 4,027,390 - IAI46_19090 0.59 +0.6 4,027,497 - IAI46_19090 0.69 -0.3 4,027,819 + +0.6 4,027,821 - +0.5 4,027,913 - +0.3 4,027,951 + +0.7 4,027,970 + +0.6 4,028,045 + -0.1 4,028,125 + +0.9 4,028,252 - IAI46_19095 0.17 -0.1 4,028,260 + IAI46_19095 0.19 +0.6 4,028,291 + IAI46_19095 0.26 -0.1 4,028,349 + IAI46_19095 0.39 +1.6 4,028,350 - IAI46_19095 0.39 +0.0 4,028,350 - IAI46_19095 0.39 -0.1 4,028,355 - IAI46_19095 0.40 +1.1 4,028,401 + IAI46_19095 0.50 +0.1 4,028,401 + IAI46_19095 0.50 -0.5 4,028,402 - IAI46_19095 0.50 -0.9 4,028,402 - IAI46_19095 0.50 -1.4 4,028,495 + IAI46_19095 0.70 -1.3 4,028,495 + IAI46_19095 0.70 +0.3 4,028,496 - IAI46_19095 0.71 -0.2 4,028,685 + +0.3 4,028,686 - -0.3 4,028,718 + +0.6 4,028,741 + +0.1 4,028,802 + IAI46_19100 0.11 -0.3 4,028,802 + IAI46_19100 0.11 +0.1 4,028,803 - IAI46_19100 0.11 +0.0 4,028,896 + IAI46_19100 0.22 +0.4 4,029,229 - IAI46_19100 0.64 +0.6 4,029,353 + IAI46_19100 0.79 +0.0 4,029,353 + IAI46_19100 0.79 +0.4 4,029,353 + IAI46_19100 0.79 -1.6 4,029,353 + IAI46_19100 0.79 -0.0 4,029,353 + IAI46_19100 0.79 -0.5 4,029,353 + IAI46_19100 0.79 +0.4 4,029,353 + IAI46_19100 0.79 -0.6 4,029,353 + IAI46_19100 0.79 +0.3 4,029,354 - IAI46_19100 0.80 -0.2 4,029,354 - IAI46_19100 0.80 +1.2 4,029,360 + IAI46_19100 0.80 -0.7 4,029,360 + IAI46_19100 0.80 -0.0 4,029,361 - IAI46_19100 0.80 +1.6 4,029,421 - IAI46_19100 0.88 +0.3 4,029,542 + +0.7 4,029,542 + +0.1
Or see this region's nucleotide sequence