Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17755 and IAI46_17760 are separated by 66 nucleotides IAI46_17760 and IAI46_17765 are separated by 90 nucleotides IAI46_17765 and IAI46_17770 are separated by 259 nucleotides IAI46_17770 and IAI46_17775 are separated by 104 nucleotides
IAI46_17755: IAI46_17755 - phosphate acetyltransferase, at 3,743,129 to 3,745,291
_17755
IAI46_17760: IAI46_17760 - NUDIX hydrolase YfcD, at 3,745,358 to 3,745,915
_17760
IAI46_17765: IAI46_17765 - phosphodiesterase, at 3,746,006 to 3,746,557
_17765
IAI46_17770: IAI46_17770 - GSH-dependent disulfide bond oxidoreductase, at 3,746,817 to 3,747,446
_17770
IAI46_17775: IAI46_17775 - dihydroneopterin triphosphate 2'-epimerase, at 3,747,551 to 3,747,922
_17775
Position (kb)
3746
3747 Strain fitness (log2 ratio)
-1
0
1
2 at 3745.118 kb on + strand at 3745.229 kb on + strand at 3745.229 kb on + strand at 3745.230 kb on - strand at 3745.230 kb on - strand at 3745.231 kb on + strand at 3745.293 kb on - strand at 3745.304 kb on + strand at 3745.305 kb on - strand at 3745.396 kb on - strand at 3745.396 kb on - strand at 3745.789 kb on + strand, within IAI46_17760 at 3745.791 kb on + strand, within IAI46_17760 at 3745.791 kb on + strand, within IAI46_17760 at 3745.791 kb on + strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.795 kb on + strand, within IAI46_17760 at 3745.795 kb on + strand, within IAI46_17760 at 3745.796 kb on - strand, within IAI46_17760 at 3745.796 kb on - strand, within IAI46_17760 at 3745.888 kb on + strand at 3745.931 kb on - strand at 3746.000 kb on + strand at 3746.001 kb on - strand at 3746.001 kb on - strand at 3746.003 kb on - strand at 3746.016 kb on - strand at 3746.064 kb on - strand, within IAI46_17765 at 3746.064 kb on - strand, within IAI46_17765 at 3746.082 kb on - strand, within IAI46_17765 at 3746.172 kb on - strand, within IAI46_17765 at 3746.188 kb on - strand, within IAI46_17765 at 3746.236 kb on - strand, within IAI46_17765 at 3746.276 kb on + strand, within IAI46_17765 at 3746.276 kb on + strand, within IAI46_17765 at 3746.531 kb on + strand at 3746.531 kb on + strand at 3746.531 kb on + strand at 3746.557 kb on + strand at 3746.557 kb on + strand at 3746.558 kb on - strand at 3746.580 kb on + strand at 3746.665 kb on + strand at 3746.665 kb on + strand at 3746.665 kb on + strand at 3746.666 kb on - strand at 3746.671 kb on + strand at 3746.671 kb on + strand at 3746.671 kb on + strand at 3746.671 kb on + strand at 3746.693 kb on - strand at 3746.693 kb on - strand at 3746.693 kb on - strand at 3746.693 kb on - strand at 3746.706 kb on + strand at 3746.707 kb on - strand at 3746.714 kb on - strand at 3746.714 kb on - strand at 3746.714 kb on - strand at 3746.730 kb on + strand at 3746.731 kb on - strand at 3746.745 kb on + strand at 3746.745 kb on + strand at 3746.746 kb on - strand at 3746.746 kb on - strand at 3746.746 kb on - strand at 3746.747 kb on + strand at 3746.747 kb on + strand at 3746.748 kb on - strand at 3746.789 kb on + strand at 3746.829 kb on + strand at 3746.830 kb on - strand at 3746.841 kb on - strand at 3746.861 kb on + strand at 3746.862 kb on - strand at 3746.862 kb on - strand at 3746.862 kb on - strand at 3746.887 kb on + strand, within IAI46_17770 at 3746.888 kb on - strand, within IAI46_17770 at 3746.888 kb on - strand, within IAI46_17770 at 3746.897 kb on + strand, within IAI46_17770 at 3746.908 kb on + strand, within IAI46_17770 at 3747.049 kb on - strand, within IAI46_17770 at 3747.109 kb on + strand, within IAI46_17770 at 3747.109 kb on + strand, within IAI46_17770 at 3747.170 kb on + strand, within IAI46_17770 at 3747.171 kb on - strand, within IAI46_17770 at 3747.214 kb on - strand, within IAI46_17770 at 3747.274 kb on - strand, within IAI46_17770 at 3747.291 kb on + strand, within IAI46_17770 at 3747.291 kb on + strand, within IAI46_17770 at 3747.292 kb on - strand, within IAI46_17770 at 3747.315 kb on + strand, within IAI46_17770 at 3747.315 kb on + strand, within IAI46_17770 at 3747.482 kb on - strand at 3747.501 kb on - strand at 3747.511 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 3,745,118 + -0.7 3,745,229 + +0.4 3,745,229 + -1.0 3,745,230 - +0.5 3,745,230 - -0.4 3,745,231 + -0.2 3,745,293 - -0.5 3,745,304 + -0.5 3,745,305 - +0.1 3,745,396 - -0.0 3,745,396 - +0.8 3,745,789 + IAI46_17760 0.77 +0.0 3,745,791 + IAI46_17760 0.78 -0.3 3,745,791 + IAI46_17760 0.78 -0.1 3,745,791 + IAI46_17760 0.78 +0.2 3,745,792 - IAI46_17760 0.78 +0.4 3,745,792 - IAI46_17760 0.78 +0.8 3,745,792 - IAI46_17760 0.78 +0.3 3,745,792 - IAI46_17760 0.78 +1.8 3,745,792 - IAI46_17760 0.78 +0.5 3,745,792 - IAI46_17760 0.78 +0.8 3,745,795 + IAI46_17760 0.78 -1.7 3,745,795 + IAI46_17760 0.78 -0.7 3,745,796 - IAI46_17760 0.78 -0.4 3,745,796 - IAI46_17760 0.78 +0.4 3,745,888 + -0.6 3,745,931 - +0.2 3,746,000 + -0.4 3,746,001 - -0.8 3,746,001 - +0.0 3,746,003 - +0.6 3,746,016 - +0.8 3,746,064 - IAI46_17765 0.11 +0.5 3,746,064 - IAI46_17765 0.11 +0.7 3,746,082 - IAI46_17765 0.14 +0.4 3,746,172 - IAI46_17765 0.30 +0.3 3,746,188 - IAI46_17765 0.33 +0.5 3,746,236 - IAI46_17765 0.42 +0.7 3,746,276 + IAI46_17765 0.49 -0.6 3,746,276 + IAI46_17765 0.49 -0.3 3,746,531 + -0.2 3,746,531 + -0.2 3,746,531 + -0.3 3,746,557 + -0.9 3,746,557 + -0.0 3,746,558 - -0.1 3,746,580 + +0.6 3,746,665 + -0.1 3,746,665 + -0.4 3,746,665 + +0.3 3,746,666 - -0.2 3,746,671 + -0.0 3,746,671 + +0.7 3,746,671 + -0.4 3,746,671 + +0.2 3,746,693 - +0.3 3,746,693 - +0.6 3,746,693 - +1.0 3,746,693 - -0.8 3,746,706 + +0.5 3,746,707 - +0.2 3,746,714 - +0.0 3,746,714 - +0.5 3,746,714 - +0.1 3,746,730 + +0.3 3,746,731 - -0.2 3,746,745 + -0.8 3,746,745 + -0.1 3,746,746 - +1.4 3,746,746 - -0.8 3,746,746 - -1.3 3,746,747 + +0.1 3,746,747 + -0.6 3,746,748 - +0.8 3,746,789 + +0.5 3,746,829 + +0.2 3,746,830 - -0.1 3,746,841 - +0.5 3,746,861 + +0.3 3,746,862 - +0.4 3,746,862 - +0.8 3,746,862 - +0.5 3,746,887 + IAI46_17770 0.11 +1.4 3,746,888 - IAI46_17770 0.11 +0.5 3,746,888 - IAI46_17770 0.11 +0.3 3,746,897 + IAI46_17770 0.13 -0.3 3,746,908 + IAI46_17770 0.14 -0.7 3,747,049 - IAI46_17770 0.37 +0.1 3,747,109 + IAI46_17770 0.46 +0.1 3,747,109 + IAI46_17770 0.46 -0.0 3,747,170 + IAI46_17770 0.56 +0.6 3,747,171 - IAI46_17770 0.56 -0.1 3,747,214 - IAI46_17770 0.63 +0.7 3,747,274 - IAI46_17770 0.73 +0.4 3,747,291 + IAI46_17770 0.75 +0.5 3,747,291 + IAI46_17770 0.75 +1.6 3,747,292 - IAI46_17770 0.75 -0.6 3,747,315 + IAI46_17770 0.79 +0.6 3,747,315 + IAI46_17770 0.79 +0.3 3,747,482 - +0.6 3,747,501 - +1.2 3,747,511 + +0.3
Or see this region's nucleotide sequence