Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14255 and IAI46_14260 are separated by 143 nucleotides IAI46_14260 and IAI46_14265 are separated by 110 nucleotides
IAI46_14255: IAI46_14255 - patatin-like phospholipase RssA, at 3,028,478 to 3,029,383
_14255
IAI46_14260: IAI46_14260 - YchJ family protein, at 3,029,527 to 3,029,991
_14260
IAI46_14265: IAI46_14265 - formyltetrahydrofolate deformylase, at 3,030,102 to 3,030,950
_14265
Position (kb)
3029
3030 Strain fitness (log2 ratio)
-1
0
1 at 3028.811 kb on + strand, within IAI46_14255 at 3028.811 kb on + strand, within IAI46_14255 at 3028.827 kb on - strand, within IAI46_14255 at 3028.895 kb on - strand, within IAI46_14255 at 3029.277 kb on - strand, within IAI46_14255 at 3029.277 kb on - strand, within IAI46_14255 at 3029.277 kb on - strand, within IAI46_14255 at 3029.277 kb on - strand, within IAI46_14255 at 3029.411 kb on + strand at 3029.431 kb on + strand at 3029.431 kb on + strand at 3029.432 kb on - strand at 3029.432 kb on - strand at 3029.455 kb on + strand at 3029.464 kb on + strand at 3029.464 kb on + strand at 3029.465 kb on - strand at 3029.465 kb on - strand at 3029.465 kb on - strand at 3029.563 kb on + strand at 3029.565 kb on + strand at 3029.566 kb on - strand at 3029.584 kb on + strand, within IAI46_14260 at 3029.624 kb on + strand, within IAI46_14260 at 3029.624 kb on + strand, within IAI46_14260 at 3029.625 kb on - strand, within IAI46_14260 at 3029.668 kb on + strand, within IAI46_14260 at 3029.669 kb on - strand, within IAI46_14260 at 3029.679 kb on + strand, within IAI46_14260 at 3029.900 kb on - strand, within IAI46_14260 at 3029.902 kb on + strand, within IAI46_14260 at 3029.902 kb on + strand, within IAI46_14260 at 3029.903 kb on - strand, within IAI46_14260 at 3029.905 kb on - strand, within IAI46_14260 at 3029.905 kb on - strand, within IAI46_14260 at 3030.189 kb on + strand, within IAI46_14265 at 3030.189 kb on + strand, within IAI46_14265 at 3030.190 kb on - strand, within IAI46_14265 at 3030.191 kb on + strand, within IAI46_14265 at 3030.191 kb on + strand, within IAI46_14265 at 3030.192 kb on - strand, within IAI46_14265 at 3030.255 kb on - strand, within IAI46_14265 at 3030.347 kb on + strand, within IAI46_14265 at 3030.594 kb on + strand, within IAI46_14265 at 3030.613 kb on - strand, within IAI46_14265 at 3030.615 kb on - strand, within IAI46_14265 at 3030.615 kb on - strand, within IAI46_14265 at 3030.712 kb on - strand, within IAI46_14265 at 3030.762 kb on + strand, within IAI46_14265 at 3030.763 kb on - strand, within IAI46_14265 at 3030.828 kb on + strand, within IAI46_14265 at 3030.828 kb on + strand, within IAI46_14265 at 3030.829 kb on - strand, within IAI46_14265 at 3030.843 kb on - strand, within IAI46_14265 at 3030.895 kb on - strand at 3030.916 kb on + strand at 3030.916 kb on + strand at 3030.916 kb on + strand at 3030.922 kb on + strand at 3030.923 kb on - strand at 3030.923 kb on - strand at 3030.923 kb on - strand at 3030.949 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 3,028,811 + IAI46_14255 0.37 -0.1 3,028,811 + IAI46_14255 0.37 +0.7 3,028,827 - IAI46_14255 0.39 +0.8 3,028,895 - IAI46_14255 0.46 +0.3 3,029,277 - IAI46_14255 0.88 +0.7 3,029,277 - IAI46_14255 0.88 +0.9 3,029,277 - IAI46_14255 0.88 +1.0 3,029,277 - IAI46_14255 0.88 +0.5 3,029,411 + -0.2 3,029,431 + -0.1 3,029,431 + +0.2 3,029,432 - +0.8 3,029,432 - +0.9 3,029,455 + -1.2 3,029,464 + -0.0 3,029,464 + +1.1 3,029,465 - +0.4 3,029,465 - +0.1 3,029,465 - -0.9 3,029,563 + +0.9 3,029,565 + -1.2 3,029,566 - -0.4 3,029,584 + IAI46_14260 0.12 +0.7 3,029,624 + IAI46_14260 0.21 -0.5 3,029,624 + IAI46_14260 0.21 +0.4 3,029,625 - IAI46_14260 0.21 +0.7 3,029,668 + IAI46_14260 0.30 +0.6 3,029,669 - IAI46_14260 0.31 +0.6 3,029,679 + IAI46_14260 0.33 +1.2 3,029,900 - IAI46_14260 0.80 +0.8 3,029,902 + IAI46_14260 0.81 -0.1 3,029,902 + IAI46_14260 0.81 +1.0 3,029,903 - IAI46_14260 0.81 -1.3 3,029,905 - IAI46_14260 0.81 +0.9 3,029,905 - IAI46_14260 0.81 +0.2 3,030,189 + IAI46_14265 0.10 +1.6 3,030,189 + IAI46_14265 0.10 +0.6 3,030,190 - IAI46_14265 0.10 +0.6 3,030,191 + IAI46_14265 0.10 +0.3 3,030,191 + IAI46_14265 0.10 +0.3 3,030,192 - IAI46_14265 0.11 -0.4 3,030,255 - IAI46_14265 0.18 -1.1 3,030,347 + IAI46_14265 0.29 -0.4 3,030,594 + IAI46_14265 0.58 +0.9 3,030,613 - IAI46_14265 0.60 +0.6 3,030,615 - IAI46_14265 0.60 +0.1 3,030,615 - IAI46_14265 0.60 -0.8 3,030,712 - IAI46_14265 0.72 -1.0 3,030,762 + IAI46_14265 0.78 +0.8 3,030,763 - IAI46_14265 0.78 +0.7 3,030,828 + IAI46_14265 0.86 +1.0 3,030,828 + IAI46_14265 0.86 +0.6 3,030,829 - IAI46_14265 0.86 +0.3 3,030,843 - IAI46_14265 0.87 +0.9 3,030,895 - -0.1 3,030,916 + +0.6 3,030,916 + -0.1 3,030,916 + +0.6 3,030,922 + +1.1 3,030,923 - +0.6 3,030,923 - -0.3 3,030,923 - +0.4 3,030,949 - +0.1
Or see this region's nucleotide sequence