Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10280 and IAI46_10285 overlap by 1 nucleotides IAI46_10285 and IAI46_10290 are separated by 13 nucleotides IAI46_10290 and IAI46_10295 overlap by 4 nucleotides
IAI46_10280: IAI46_10280 - peptide chain release factor 1, at 2,169,821 to 2,170,906
_10280
IAI46_10285: IAI46_10285 - peptide chain release factor N(5)-glutamine methyltransferase, at 2,170,906 to 2,171,778
_10285
IAI46_10290: IAI46_10290 - SirB2 family protein, at 2,171,792 to 2,172,190
_10290
IAI46_10295: IAI46_10295 - tetratricopeptide repeat-containing protein, at 2,172,187 to 2,172,996
_10295
Position (kb)
2170
2171
2172 Strain fitness (log2 ratio)
-1
0
1
2 at 2170.904 kb on + strand at 2170.904 kb on + strand at 2170.904 kb on + strand at 2171.113 kb on + strand, within IAI46_10285 at 2171.113 kb on + strand, within IAI46_10285 at 2171.113 kb on + strand, within IAI46_10285 at 2171.462 kb on - strand, within IAI46_10285 at 2171.757 kb on + strand at 2171.781 kb on - strand at 2171.846 kb on - strand, within IAI46_10290 at 2171.846 kb on - strand, within IAI46_10290 at 2171.931 kb on + strand, within IAI46_10290 at 2171.931 kb on + strand, within IAI46_10290 at 2171.932 kb on - strand, within IAI46_10290 at 2171.986 kb on - strand, within IAI46_10290 at 2172.037 kb on + strand, within IAI46_10290 at 2172.040 kb on + strand, within IAI46_10290 at 2172.040 kb on + strand, within IAI46_10290 at 2172.040 kb on + strand, within IAI46_10290 at 2172.040 kb on + strand, within IAI46_10290 at 2172.044 kb on + strand, within IAI46_10290 at 2172.044 kb on + strand, within IAI46_10290 at 2172.045 kb on - strand, within IAI46_10290 at 2172.045 kb on - strand, within IAI46_10290 at 2172.045 kb on - strand, within IAI46_10290 at 2172.046 kb on + strand, within IAI46_10290 at 2172.059 kb on + strand, within IAI46_10290 at 2172.134 kb on + strand, within IAI46_10290 at 2172.182 kb on + strand at 2172.186 kb on + strand at 2172.186 kb on + strand at 2172.192 kb on + strand at 2172.195 kb on + strand at 2172.729 kb on + strand, within IAI46_10295 at 2172.729 kb on + strand, within IAI46_10295 at 2172.729 kb on + strand, within IAI46_10295 at 2172.729 kb on + strand, within IAI46_10295
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 2,170,904 + -0.1 2,170,904 + +0.8 2,170,904 + +0.6 2,171,113 + IAI46_10285 0.24 -0.9 2,171,113 + IAI46_10285 0.24 -0.3 2,171,113 + IAI46_10285 0.24 -1.0 2,171,462 - IAI46_10285 0.64 +1.3 2,171,757 + -0.6 2,171,781 - -0.3 2,171,846 - IAI46_10290 0.14 -1.4 2,171,846 - IAI46_10290 0.14 -0.8 2,171,931 + IAI46_10290 0.35 +0.1 2,171,931 + IAI46_10290 0.35 -0.1 2,171,932 - IAI46_10290 0.35 -0.6 2,171,986 - IAI46_10290 0.49 -0.8 2,172,037 + IAI46_10290 0.61 +0.6 2,172,040 + IAI46_10290 0.62 +1.6 2,172,040 + IAI46_10290 0.62 -1.6 2,172,040 + IAI46_10290 0.62 +0.4 2,172,040 + IAI46_10290 0.62 +0.3 2,172,044 + IAI46_10290 0.63 +0.8 2,172,044 + IAI46_10290 0.63 -0.1 2,172,045 - IAI46_10290 0.63 +0.6 2,172,045 - IAI46_10290 0.63 +2.1 2,172,045 - IAI46_10290 0.63 -0.8 2,172,046 + IAI46_10290 0.64 -0.2 2,172,059 + IAI46_10290 0.67 +0.1 2,172,134 + IAI46_10290 0.86 +0.4 2,172,182 + +0.1 2,172,186 + +0.2 2,172,186 + +1.6 2,172,192 + +0.5 2,172,195 + -0.1 2,172,729 + IAI46_10295 0.67 -0.5 2,172,729 + IAI46_10295 0.67 +0.6 2,172,729 + IAI46_10295 0.67 +0.8 2,172,729 + IAI46_10295 0.67 +0.8
Or see this region's nucleotide sequence