Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09750 and IAI46_09755 are separated by 552 nucleotides IAI46_09755 and IAI46_09760 are separated by 11 nucleotides IAI46_09760 and IAI46_09765 are separated by 141 nucleotides
IAI46_09750: IAI46_09750 - ribonuclease E, at 2,064,376 to 2,067,795
_09750
IAI46_09755: IAI46_09755 - 23S rRNA pseudouridine(955/2504/2580) synthase RluC, at 2,068,348 to 2,069,310
_09755
IAI46_09760: IAI46_09760 - septum formation inhibitor Maf, at 2,069,322 to 2,069,903
_09760
IAI46_09765: IAI46_09765 - 23S rRNA accumulation protein YceD, at 2,070,045 to 2,070,566
_09765
Position (kb)
2068
2069
2070 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2067.921 kb on - strand at 2067.932 kb on - strand at 2067.974 kb on - strand at 2068.114 kb on - strand at 2068.183 kb on - strand at 2068.183 kb on - strand at 2068.191 kb on - strand at 2068.191 kb on - strand at 2068.191 kb on - strand at 2068.253 kb on + strand at 2068.294 kb on - strand at 2068.335 kb on - strand at 2068.497 kb on + strand, within IAI46_09755 at 2068.498 kb on - strand, within IAI46_09755 at 2068.498 kb on - strand, within IAI46_09755 at 2068.519 kb on + strand, within IAI46_09755 at 2068.786 kb on - strand, within IAI46_09755 at 2068.873 kb on + strand, within IAI46_09755 at 2068.919 kb on + strand, within IAI46_09755 at 2068.919 kb on + strand, within IAI46_09755 at 2069.238 kb on + strand at 2069.313 kb on - strand at 2069.492 kb on - strand, within IAI46_09760 at 2069.579 kb on - strand, within IAI46_09760 at 2069.726 kb on - strand, within IAI46_09760 at 2069.831 kb on + strand, within IAI46_09760 at 2069.893 kb on - strand at 2069.928 kb on - strand at 2069.972 kb on + strand at 2069.973 kb on - strand at 2070.014 kb on + strand at 2070.030 kb on + strand at 2070.030 kb on + strand at 2070.082 kb on + strand at 2070.306 kb on + strand, within IAI46_09765
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 2,067,921 - -0.5 2,067,932 - -0.2 2,067,974 - +0.3 2,068,114 - -0.6 2,068,183 - -0.2 2,068,183 - +0.6 2,068,191 - -0.1 2,068,191 - +0.8 2,068,191 - -0.6 2,068,253 + +0.1 2,068,294 - -0.3 2,068,335 - -0.0 2,068,497 + IAI46_09755 0.15 -1.0 2,068,498 - IAI46_09755 0.16 +0.6 2,068,498 - IAI46_09755 0.16 -0.1 2,068,519 + IAI46_09755 0.18 +0.6 2,068,786 - IAI46_09755 0.45 +0.4 2,068,873 + IAI46_09755 0.55 +1.3 2,068,919 + IAI46_09755 0.59 -0.1 2,068,919 + IAI46_09755 0.59 -0.3 2,069,238 + -0.1 2,069,313 - +0.9 2,069,492 - IAI46_09760 0.29 +0.4 2,069,579 - IAI46_09760 0.44 -0.5 2,069,726 - IAI46_09760 0.69 -2.7 2,069,831 + IAI46_09760 0.87 -0.6 2,069,893 - +0.0 2,069,928 - +0.1 2,069,972 + -0.2 2,069,973 - -1.0 2,070,014 + +0.6 2,070,030 + +2.4 2,070,030 + -1.4 2,070,082 + -0.4 2,070,306 + IAI46_09765 0.50 +0.6
Or see this region's nucleotide sequence