Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03995 and IAI46_04000 are separated by 578 nucleotides IAI46_04000 and IAI46_04005 are separated by 142 nucleotides IAI46_04005 and IAI46_04010 are separated by 223 nucleotides
IAI46_03995: IAI46_03995 - ATP-dependent chaperone ClpB, at 862,899 to 865,472
_03995
IAI46_04000: IAI46_04000 - 16S ribosomal RNA, at 866,051 to 867,595
_04000
IAI46_04005: IAI46_04005 - tRNA-Glu, at 867,738 to 867,813
_04005
IAI46_04010: IAI46_04010 - 23S ribosomal RNA, at 868,037 to 870,974
_04010
Position (kb) 866
867
868 Strain fitness (log2 ratio) -1
0
1 at 865.098 kb on + strand, within IAI46_03995 at 865.098 kb on + strand, within IAI46_03995 at 865.098 kb on + strand, within IAI46_03995 at 865.098 kb on + strand, within IAI46_03995 at 865.099 kb on - strand, within IAI46_03995 at 865.100 kb on + strand, within IAI46_03995 at 865.132 kb on + strand, within IAI46_03995 at 865.166 kb on + strand, within IAI46_03995 at 865.168 kb on + strand, within IAI46_03995 at 865.168 kb on + strand, within IAI46_03995 at 865.168 kb on + strand, within IAI46_03995 at 865.169 kb on - strand, within IAI46_03995 at 865.169 kb on - strand, within IAI46_03995 at 865.169 kb on - strand, within IAI46_03995 at 865.169 kb on - strand, within IAI46_03995 at 865.180 kb on + strand, within IAI46_03995 at 865.181 kb on - strand, within IAI46_03995 at 865.181 kb on - strand, within IAI46_03995 at 865.246 kb on - strand at 865.246 kb on - strand at 865.246 kb on - strand at 865.246 kb on - strand at 865.246 kb on - strand at 865.270 kb on - strand at 865.280 kb on + strand at 865.280 kb on + strand at 865.281 kb on - strand at 865.332 kb on + strand at 865.333 kb on - strand at 865.358 kb on + strand at 865.358 kb on + strand at 865.359 kb on - strand at 865.359 kb on - strand at 865.423 kb on + strand at 865.455 kb on - strand at 865.477 kb on + strand at 865.478 kb on - strand at 865.481 kb on + strand at 865.481 kb on + strand at 865.481 kb on + strand at 865.482 kb on - strand at 865.482 kb on - strand at 865.482 kb on - strand at 865.482 kb on - strand at 865.484 kb on + strand at 865.485 kb on - strand at 865.485 kb on - strand at 865.488 kb on + strand at 865.488 kb on + strand at 865.488 kb on + strand at 865.488 kb on + strand at 865.488 kb on + strand at 865.489 kb on - strand at 865.489 kb on - strand at 865.489 kb on - strand at 865.489 kb on - strand at 865.489 kb on - strand at 865.489 kb on - strand at 865.489 kb on - strand at 865.491 kb on - strand at 865.491 kb on - strand at 865.491 kb on - strand at 865.491 kb on - strand at 865.492 kb on + strand at 865.493 kb on - strand at 865.493 kb on - strand at 865.493 kb on - strand at 865.493 kb on - strand at 865.554 kb on + strand at 865.555 kb on - strand at 865.581 kb on - strand at 865.603 kb on + strand at 865.603 kb on + strand at 865.603 kb on + strand at 865.604 kb on - strand at 865.612 kb on + strand at 865.624 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 865,098 + IAI46_03995 0.85 +0.1 865,098 + IAI46_03995 0.85 +0.7 865,098 + IAI46_03995 0.85 +0.3 865,098 + IAI46_03995 0.85 -0.2 865,099 - IAI46_03995 0.85 -0.5 865,100 + IAI46_03995 0.86 +0.6 865,132 + IAI46_03995 0.87 +1.1 865,166 + IAI46_03995 0.88 +0.7 865,168 + IAI46_03995 0.88 +0.6 865,168 + IAI46_03995 0.88 +0.9 865,168 + IAI46_03995 0.88 -0.3 865,169 - IAI46_03995 0.88 +0.5 865,169 - IAI46_03995 0.88 +0.6 865,169 - IAI46_03995 0.88 -1.2 865,169 - IAI46_03995 0.88 -0.8 865,180 + IAI46_03995 0.89 +0.3 865,181 - IAI46_03995 0.89 -0.9 865,181 - IAI46_03995 0.89 -1.3 865,246 - +0.6 865,246 - +1.1 865,246 - -0.6 865,246 - -1.5 865,246 - -0.9 865,270 - -0.9 865,280 + +0.9 865,280 + +0.4 865,281 - -0.4 865,332 + +0.8 865,333 - +0.5 865,358 + -0.3 865,358 + -1.2 865,359 - +0.6 865,359 - +1.7 865,423 + +0.1 865,455 - -0.4 865,477 + -0.2 865,478 - -0.4 865,481 + +0.8 865,481 + +1.0 865,481 + +0.6 865,482 - -0.2 865,482 - -0.4 865,482 - -0.4 865,482 - +0.2 865,484 + +0.3 865,485 - -0.4 865,485 - +0.2 865,488 + -1.3 865,488 + -0.3 865,488 + +0.2 865,488 + -0.2 865,488 + +0.3 865,489 - +0.1 865,489 - -0.2 865,489 - +0.1 865,489 - +0.1 865,489 - -0.2 865,489 - -0.5 865,489 - +0.6 865,491 - +0.5 865,491 - +0.0 865,491 - -0.6 865,491 - -0.4 865,492 + +0.0 865,493 - +0.3 865,493 - +0.9 865,493 - +0.5 865,493 - -0.5 865,554 + +0.7 865,555 - +0.2 865,581 - +0.9 865,603 + -0.6 865,603 + +0.2 865,603 + +0.9 865,604 - +0.7 865,612 + +0.5 865,624 - +1.5
Or see this region's nucleotide sequence