Strain Fitness in Serratia liquefaciens MT49 around IAI46_01160

Experiment: Cadmium acetate 40 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_01155 and IAI46_01160 are separated by 451 nucleotidesIAI46_01160 and IAI46_01165 are separated by 142 nucleotidesIAI46_01165 and IAI46_01170 are separated by 223 nucleotides IAI46_01155: IAI46_01155 - menaquinone-dependent protoporphyrinogen IX dehydrogenase, at 257,081 to 257,614 _01155 IAI46_01160: IAI46_01160 - 16S ribosomal RNA, at 258,066 to 259,610 _01160 IAI46_01165: IAI46_01165 - tRNA-Glu, at 259,753 to 259,828 _01165 IAI46_01170: IAI46_01170 - 23S ribosomal RNA, at 260,052 to 262,989 _01170 Position (kb) 258 259 260Strain fitness (log2 ratio) -1 0 1at 257.597 kb on - strandat 257.603 kb on + strandat 257.604 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic
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257,597 - -0.2
257,603 + +0.1
257,604 - -0.7

Or see this region's nucleotide sequence