Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00775 and IAI46_00780 are separated by 51 nucleotides IAI46_00780 and IAI46_00785 are separated by 135 nucleotides IAI46_00785 and IAI46_00790 are separated by 11 nucleotides IAI46_00790 and IAI46_00795 are separated by 35 nucleotides
IAI46_00775: IAI46_00775 - threonine export protein RhtC, at 176,983 to 177,609
_00775
IAI46_00780: IAI46_00780 - homoserine/homoserine lactone efflux protein, at 177,661 to 178,281
_00780
IAI46_00785: IAI46_00785 - lysophospholipase L2, at 178,417 to 179,454
_00785
IAI46_00790: IAI46_00790 - sugar/pyridoxal phosphate phosphatase YigL, at 179,466 to 180,266
_00790
IAI46_00795: IAI46_00795 - glycerophosphodiester phosphodiesterase, at 180,302 to 181,381
_00795
Position (kb) 178
179
180 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 177.526 kb on + strand, within IAI46_00775 at 177.566 kb on + strand at 177.567 kb on - strand at 177.567 kb on - strand at 177.768 kb on + strand, within IAI46_00780 at 177.822 kb on + strand, within IAI46_00780 at 177.823 kb on - strand, within IAI46_00780 at 177.823 kb on - strand, within IAI46_00780 at 177.835 kb on + strand, within IAI46_00780 at 177.836 kb on - strand, within IAI46_00780 at 177.842 kb on + strand, within IAI46_00780 at 177.981 kb on + strand, within IAI46_00780 at 177.981 kb on + strand, within IAI46_00780 at 177.982 kb on - strand, within IAI46_00780 at 177.982 kb on - strand, within IAI46_00780 at 178.037 kb on + strand, within IAI46_00780 at 178.037 kb on + strand, within IAI46_00780 at 178.256 kb on + strand at 178.256 kb on + strand at 178.257 kb on - strand at 178.349 kb on + strand at 178.349 kb on + strand at 178.350 kb on - strand at 178.354 kb on + strand at 178.354 kb on + strand at 178.360 kb on + strand at 178.360 kb on + strand at 178.361 kb on - strand at 178.429 kb on - strand at 178.562 kb on + strand, within IAI46_00785 at 178.601 kb on + strand, within IAI46_00785 at 178.602 kb on - strand, within IAI46_00785 at 178.602 kb on - strand, within IAI46_00785 at 178.629 kb on + strand, within IAI46_00785 at 178.630 kb on - strand, within IAI46_00785 at 178.634 kb on - strand, within IAI46_00785 at 178.649 kb on - strand, within IAI46_00785 at 178.685 kb on + strand, within IAI46_00785 at 178.685 kb on + strand, within IAI46_00785 at 178.686 kb on - strand, within IAI46_00785 at 178.728 kb on + strand, within IAI46_00785 at 178.748 kb on + strand, within IAI46_00785 at 178.762 kb on + strand, within IAI46_00785 at 178.930 kb on + strand, within IAI46_00785 at 178.930 kb on + strand, within IAI46_00785 at 178.931 kb on - strand, within IAI46_00785 at 178.931 kb on - strand, within IAI46_00785 at 178.931 kb on - strand, within IAI46_00785 at 178.934 kb on + strand, within IAI46_00785 at 178.939 kb on - strand, within IAI46_00785 at 178.939 kb on - strand, within IAI46_00785 at 179.002 kb on + strand, within IAI46_00785 at 179.002 kb on + strand, within IAI46_00785 at 179.002 kb on + strand, within IAI46_00785 at 179.003 kb on - strand, within IAI46_00785 at 179.005 kb on + strand, within IAI46_00785 at 179.005 kb on + strand, within IAI46_00785 at 179.006 kb on - strand, within IAI46_00785 at 179.006 kb on - strand, within IAI46_00785 at 179.006 kb on - strand, within IAI46_00785 at 179.041 kb on + strand, within IAI46_00785 at 179.098 kb on + strand, within IAI46_00785 at 179.098 kb on + strand, within IAI46_00785 at 179.138 kb on - strand, within IAI46_00785 at 179.138 kb on - strand, within IAI46_00785 at 179.176 kb on - strand, within IAI46_00785 at 179.210 kb on + strand, within IAI46_00785 at 179.414 kb on + strand at 179.414 kb on + strand at 179.415 kb on - strand at 179.415 kb on - strand at 179.415 kb on - strand at 179.415 kb on - strand at 179.415 kb on - strand at 179.422 kb on - strand at 179.453 kb on - strand at 179.460 kb on - strand at 179.460 kb on - strand at 179.460 kb on - strand at 179.465 kb on + strand at 179.465 kb on + strand at 179.465 kb on + strand at 179.465 kb on + strand at 179.465 kb on + strand at 179.465 kb on + strand at 179.466 kb on - strand at 179.466 kb on - strand at 179.466 kb on - strand at 179.466 kb on - strand at 179.469 kb on + strand at 179.469 kb on + strand at 179.491 kb on + strand at 179.491 kb on + strand at 179.491 kb on + strand at 179.491 kb on + strand at 179.491 kb on + strand at 179.492 kb on - strand at 179.740 kb on - strand, within IAI46_00790 at 179.765 kb on + strand, within IAI46_00790 at 179.799 kb on + strand, within IAI46_00790 at 179.800 kb on - strand, within IAI46_00790 at 179.907 kb on + strand, within IAI46_00790 at 179.907 kb on + strand, within IAI46_00790 at 179.908 kb on - strand, within IAI46_00790 at 179.908 kb on - strand, within IAI46_00790 at 179.908 kb on - strand, within IAI46_00790 at 180.075 kb on + strand, within IAI46_00790 at 180.077 kb on + strand, within IAI46_00790 at 180.077 kb on + strand, within IAI46_00790 at 180.077 kb on + strand, within IAI46_00790 at 180.077 kb on + strand, within IAI46_00790 at 180.078 kb on - strand, within IAI46_00790 at 180.078 kb on - strand, within IAI46_00790 at 180.078 kb on - strand, within IAI46_00790 at 180.185 kb on + strand, within IAI46_00790 at 180.186 kb on - strand, within IAI46_00790 at 180.186 kb on - strand, within IAI46_00790 at 180.241 kb on - strand at 180.241 kb on - strand at 180.241 kb on - strand at 180.241 kb on - strand at 180.241 kb on - strand at 180.267 kb on + strand at 180.268 kb on - strand at 180.268 kb on - strand at 180.300 kb on + strand at 180.300 kb on + strand at 180.301 kb on - strand at 180.301 kb on - strand at 180.303 kb on + strand at 180.303 kb on + strand at 180.304 kb on - strand at 180.387 kb on + strand at 180.399 kb on + strand at 180.399 kb on + strand at 180.399 kb on + strand at 180.423 kb on + strand, within IAI46_00795 at 180.423 kb on + strand, within IAI46_00795
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 177,526 + IAI46_00775 0.87 +0.2 177,566 + +1.2 177,567 - +0.2 177,567 - +0.9 177,768 + IAI46_00780 0.17 -0.7 177,822 + IAI46_00780 0.26 +0.1 177,823 - IAI46_00780 0.26 +0.3 177,823 - IAI46_00780 0.26 +0.2 177,835 + IAI46_00780 0.28 +0.3 177,836 - IAI46_00780 0.28 +0.4 177,842 + IAI46_00780 0.29 -0.5 177,981 + IAI46_00780 0.52 -0.8 177,981 + IAI46_00780 0.52 +0.9 177,982 - IAI46_00780 0.52 +0.0 177,982 - IAI46_00780 0.52 -0.1 178,037 + IAI46_00780 0.61 -1.0 178,037 + IAI46_00780 0.61 +0.0 178,256 + +0.2 178,256 + -0.1 178,257 - -0.3 178,349 + +0.8 178,349 + +1.3 178,350 - +0.3 178,354 + -0.3 178,354 + +0.1 178,360 + -0.5 178,360 + -0.3 178,361 - +0.9 178,429 - +0.6 178,562 + IAI46_00785 0.14 +1.3 178,601 + IAI46_00785 0.18 -0.7 178,602 - IAI46_00785 0.18 -0.1 178,602 - IAI46_00785 0.18 -0.5 178,629 + IAI46_00785 0.20 +0.9 178,630 - IAI46_00785 0.21 +0.2 178,634 - IAI46_00785 0.21 +0.5 178,649 - IAI46_00785 0.22 -0.5 178,685 + IAI46_00785 0.26 +0.8 178,685 + IAI46_00785 0.26 -1.2 178,686 - IAI46_00785 0.26 -0.1 178,728 + IAI46_00785 0.30 -0.0 178,748 + IAI46_00785 0.32 +0.6 178,762 + IAI46_00785 0.33 +0.1 178,930 + IAI46_00785 0.49 -0.3 178,930 + IAI46_00785 0.49 -0.1 178,931 - IAI46_00785 0.50 -0.1 178,931 - IAI46_00785 0.50 -0.5 178,931 - IAI46_00785 0.50 +0.1 178,934 + IAI46_00785 0.50 +0.8 178,939 - IAI46_00785 0.50 +0.6 178,939 - IAI46_00785 0.50 +0.8 179,002 + IAI46_00785 0.56 +0.8 179,002 + IAI46_00785 0.56 +0.7 179,002 + IAI46_00785 0.56 -0.0 179,003 - IAI46_00785 0.56 +0.3 179,005 + IAI46_00785 0.57 -0.4 179,005 + IAI46_00785 0.57 +0.5 179,006 - IAI46_00785 0.57 +1.3 179,006 - IAI46_00785 0.57 +0.0 179,006 - IAI46_00785 0.57 -0.1 179,041 + IAI46_00785 0.60 +0.3 179,098 + IAI46_00785 0.66 -0.6 179,098 + IAI46_00785 0.66 -0.4 179,138 - IAI46_00785 0.69 -0.0 179,138 - IAI46_00785 0.69 +0.7 179,176 - IAI46_00785 0.73 +1.2 179,210 + IAI46_00785 0.76 -0.0 179,414 + +0.0 179,414 + +0.4 179,415 - +0.6 179,415 - +0.2 179,415 - -0.4 179,415 - -0.0 179,415 - -0.7 179,422 - +0.1 179,453 - -1.0 179,460 - +0.9 179,460 - +0.4 179,460 - -0.7 179,465 + +0.3 179,465 + +0.2 179,465 + +1.3 179,465 + +0.3 179,465 + -1.1 179,465 + -1.6 179,466 - -0.4 179,466 - -1.6 179,466 - -0.6 179,466 - +0.5 179,469 + +0.4 179,469 + +0.2 179,491 + +0.6 179,491 + -0.3 179,491 + +0.3 179,491 + -0.0 179,491 + +0.6 179,492 - -0.6 179,740 - IAI46_00790 0.34 -0.2 179,765 + IAI46_00790 0.37 +0.3 179,799 + IAI46_00790 0.42 -0.8 179,800 - IAI46_00790 0.42 -0.8 179,907 + IAI46_00790 0.55 +0.5 179,907 + IAI46_00790 0.55 +0.5 179,908 - IAI46_00790 0.55 +0.3 179,908 - IAI46_00790 0.55 +0.3 179,908 - IAI46_00790 0.55 +0.9 180,075 + IAI46_00790 0.76 +0.6 180,077 + IAI46_00790 0.76 +0.3 180,077 + IAI46_00790 0.76 -0.3 180,077 + IAI46_00790 0.76 +0.8 180,077 + IAI46_00790 0.76 +0.2 180,078 - IAI46_00790 0.76 +0.4 180,078 - IAI46_00790 0.76 -0.3 180,078 - IAI46_00790 0.76 +0.8 180,185 + IAI46_00790 0.90 +0.5 180,186 - IAI46_00790 0.90 +0.4 180,186 - IAI46_00790 0.90 -0.3 180,241 - -0.3 180,241 - +1.0 180,241 - -0.3 180,241 - +0.5 180,241 - +3.0 180,267 + +0.6 180,268 - -0.1 180,268 - -0.2 180,300 + -0.8 180,300 + +0.3 180,301 - -0.8 180,301 - +0.3 180,303 + +0.4 180,303 + +0.7 180,304 - -2.0 180,387 + +0.3 180,399 + +0.9 180,399 + -1.3 180,399 + +0.9 180,423 + IAI46_00795 0.11 +0.5 180,423 + IAI46_00795 0.11 +1.1
Or see this region's nucleotide sequence